Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2381 107 2e-18 seq2325 95.1 1e-14 >seq2381 Length=1337761 Score = 107 bits (118), Expect = 2e-18 Identities = 719/1143 (63%), Gaps = 27/1143 (2%) Strand=Plus/Plus Query 117938 TTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAAT-CACATCCTTCATCT 117996 ||| || |||||||| || || ||||| || ||||| | || ||| | |||| | Sbjct 918636 TTGCGACTGATCGATAAACGCACCACGATCTGCGGCCATTTTGATGCACGTT-TTCACCG 918694 Query 117997 TGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTT 118056 ||| ||||| || || |||| |||| ||| || | || ||| || | || |||| Sbjct 918695 AGATCTCCCATACCGTTTTGTACAGGTCGCGAATTTCCTGCGGTATAGCCGCAATCTTTT 918754 Query 118057 GGATGGATCCACCCGCCTTGACCATGAGATC---CTTCATATCCTTTGACCAGAGACCAA 118113 |||| |||||| ||| || | || |||||| || ||| ||||| | Sbjct 918755 GGATCGATCCATTG---TTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCA 918811 Query 118114 TCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGC 118173 | || | | ||||| || ||||| | || || || ||||| |||| || || Sbjct 918812 TGTTGGTCAAATCCTGCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGC 918871 Query 118174 GTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGG 118233 | || || | || | |||||| ||||| || | |||||||| || | ||||| | Sbjct 918872 GCCTATTGTAAACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTG 918931 Query 118234 CTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAA 118293 | ||||| || || ||||| || |||| || || || || | ||| | || | Sbjct 918932 CCGTGGAAGCCGTCGGCATCGGGGCCAACAGCAGCGAATTGCGAATACCGTGTTTGGCGA 918991 Query 118294 TGCGTTCCTTGAGAGCGTCCCAGT--CGTAGTTGAGCTTTGTCTCCCCCTGCCACATATC 118351 | |||||| | || |||||| | || | | | | ||| | |||||| || Sbjct 918992 TCTTTTCCTTCAACTCGGCCCAGTTCCACAGATCCG--TCGGTTCCTTGTTCCACATCTC 919049 Query 118352 AAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAAC 118411 |||| | ||| || | | | | || ||||| | ||||| || || || || Sbjct 919050 GTACTGCAAGATGCCCTTGCTCACCGGACTGCCCTCGTACGTCTCGTACGGACCATCTCG 919109 Query 118412 CTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGC 118471 | ||||| || ||||||| || || || ||| || || ||||| || || | Sbjct 919110 AGCGGCCAACTCACAGCTCGCTTCCAGCGCGCCGTAGTAGATAGTTTCGAATATTTGCTG 919169 Query 118472 ATTCATTGCCTTGG--CCTCGTCGGAATCAAACGCGAGTCGGCA-CAAAATAAATACATC 118528 ||| | || || | |||| ||| || ||| || ||| || || || |||| Sbjct 919170 ATTTA--GCTTTTGAGCCTCTTCGCTTTCGTACG-GATAGCGCATCAGGATGAACGCATC 919226 Query 118529 CGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGT 118588 || | ||||| || |||| || || || | || | |||||| || | ||| Sbjct 919227 GGCCATGCCTTGCACGCCGATCCCGATCGGCCTGTGGCGCATATTGGAGCGCTTAGCCTC 919286 Query 118589 CTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGT 118648 | ||||||||| |||| ||| || | | || ||||| || || ||| | Sbjct 919287 CGGCACGGGATAGTAATTGACATCAATGATTTTGTTCAGATTGCGCGTCACTGTCTTAGC 919346 Query 118649 GATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAG 118708 || ||| | |||||| | | ||| | | | |||| || ||| || | | Sbjct 919347 GACTTCCTTCAGCTTTGCAAAGTCATACGTTT---TGTCTTGCTTTACAAACATGTTCAA 919403 Query 118709 GGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTC 118768 |||||| || |||||||| || || | ||||||||| | |||||| | ||| || Sbjct 919404 GGCGATCGAGGCCAGATTGCATACCGCTACCTCATCCTTCGACGAGTACTCCACAATCTC 919463 Query 118769 CGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTT--GTGTTA 118826 ||||||||||| |||| || |||||||| | |||| || || ||||| || Sbjct 919464 AGTGCACAAGTTGGAACATTTGATGGTGCCGATATTCTGCTGGTT--ACTTTTACGATTG 919521 Query 118827 CACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 118886 || ||||||||||| |||||||| ||| || || ||| ||| || | || || || Sbjct 919522 CAAGCATCCTTGTACAGCATGTACGGCACGCCGGTTTCCACTTGCGATTCGATTATCGCA 919581 Query 118887 TTCCAGACAT-CGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGT 118945 ||| | || | || || | || || | || ||||||| ||||||| || Sbjct 919582 AACCACAGATCCTGCGCCTTCACCTGTCGC-ATAAAGCGACCCTCTTTCTCGTACCCCGT 919640 Query 118946 GTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCA 119005 ||| || || |||||||| ||| || || || ||||| || | | ||||| Sbjct 919641 GTACAGCTTCTCGAACTCTTCGCCCCAGGTGTCCGATAGCCCGGGACAATCGTGCGGGCA 919700 Query 119006 GAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAG 119065 | || ||| | | |||| || |||| |||||| ||||| || ||||| || Sbjct 919701 CATCAGGCTCCACATTTCGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTATCCACAG 919760 Query 119066 CGC 119068 || Sbjct 919761 TGC 919763 >seq2325 Length=2510080 Score = 95.1 bits (104), Expect = 1e-14 Identities = 196/289 (68%), Gaps = 2/289 (1%) Strand=Plus/Plus Query 179038 GTGAAGATGTACCTCGTTTGAGACGCA-TCTTTGCCACCCATGAGACGCGTCCCAAATTG 179096 |||||||||||||| | | ||| || ||||||||| | || ||||| || || || Sbjct 543150 GTGAAGATGTACCTGGGGCTGG-CGCTGTCCTTGCCACCCGTCAGCCGCGTACCGAACTG 543208 Query 179097 ACCACATGGCTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATTGGCCAACTTGAC 179156 ||| | || | | |||||||| ||||| || | ||||| | |||| |||| Sbjct 543209 ACCGCCCGGGTACAACAGATTGATGTTGTTGCTGCCGACGTAGTTCTGCGCCAGGTTGAT 543268 Query 179157 AATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAAGCCGACTTGTCCGCCACATATGC 179216 ||||| ||| || | || ||||||||||| || ||||| |||||||| | | Sbjct 543269 GATCGTGGAGCAGAGCGACATCTCGCCGTGATGGTAGGCGGACTTTTCCGCCACTGAACC 543328 Query 179217 CGCCAACTGCGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATCAC 179276 |||| ||| |||||||||| ||| |||| || | |||||||| |||| ||| Sbjct 543329 GGCCAGCTGGGCCACCTTCACCTCGCGCTTGTCGTCACGCTTGAAGCACGTGTACAGCAC 543388 Query 179277 CTTTCTTTGTGAAGGCTTGAGGCCGTCGGCCATGTGCGCGATGGAACGC 179325 ||| | || ||||| | ||||| |||| || ||||| ||| Sbjct 543389 CTTGCGCTGGCCCGGCTTCAACCCGTCCAGCATGCACGGAATGGAGCGC 543437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618413376967880