Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2001 98.7 1e-15 seq702 86.0 7e-12 >seq2001 Length=1904535 Score = 98.7 bits (108), Expect = 1e-15 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 94797 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 94856 ||||| ||||| || | ||||| || |||||||||||||||||| || ||| Sbjct 1560176 CTTTGGCGAGCGGGTCGTGGCATTCGCTGCGGTTGAGGGTATCTTCTTCAGCGGCAGCTT 1560235 Query 94857 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 94916 | ||| || | ||||| ||||| || || || |||||||| ||| |||||| ||||| Sbjct 1560236 CGCCGCGATCTTCTGGCTGAAGAAACGTGGCCTGATGCCAGGACTCACCTTCTCGAACGA 1560295 Query 94917 GCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||| ||||| || ||||| || || ||| || ||||| Sbjct 1560296 GCTGATCTCGCGCGACGAAGGGCTGCACTGCGACTTTGC 1560334 >seq702 Length=496488 Score = 86.0 bits (94), Expect = 7e-12 Identities = 116/160 (73%), Gaps = 4/160 (3%) Strand=Plus/Plus Query 154106 TATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACATGGTATCCAAGTTGGTGCG 154165 ||||| || || || ||||| || ||| | || |||||| | ||| | || || || Sbjct 401409 TATGGCCGAGTGGCTCCACGTTCCGGTTTGGCCGTGAAAAACTTCATCGATGTGGGCGCC 401468 Query 154166 GGTGTTGTTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTTTTCAATCA--CGGAG 154223 ||||| || || |||||| |||| | ||| ||| || || |||||||| ||||| Sbjct 401469 GGTGTCGTCGACGAGGACTACCGGGGTAACGTCGGAGTTGTACTGTTCAATCATTCGGAG 401528 Query 154224 ACAAAGACTTTGAGGTAAAGAGGGGTGAGCGCATCGCACA 154263 ||||| |||||| || |||| || || ||||||||||| Sbjct 401529 ACAAA--CTTTGAAGTTAAGAAAGGGGATCGCATCGCACA 401566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583240218184520