Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq224 187 8e-42 seq113 168 2e-36 seq14 111 5e-19 seq147 89.7 2e-12 seq2414 87.8 5e-12 seq2380 87.8 5e-12 seq2103 87.8 5e-12 seq2036 87.8 5e-12 seq1112 87.8 5e-12 seq1001 87.8 5e-12 seq835 87.8 5e-12 seq313 87.8 5e-12 >seq224 Length=3387546 Score = 187 bits (206), Expect = 8e-42 Identities = 180/231 (78%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||| |||||||| || ||||| || || || ||||| || Sbjct 1793858 CATACCACCACGCAGACGGAGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTATAGTC 1793917 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || || || |||||||| ||||| ||||| |||||||| || Sbjct 1793918 CGACAGGGTGCGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGG 1793977 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || ||||| || || ||||| || || || || ||||| ||||||| ||| |||||||| Sbjct 1793978 CGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCAATCGTATCGGATGGTTC 1794037 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||||||||| || ||||| || ||||||||||| Sbjct 1794038 GACCTCGAGGGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCAT 1794088 Score = 176 bits (194), Expect = 1e-38 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | || || ||||||||||| || || || || || ||||| || || Sbjct 1793634 CCACCACGCAGACGGAGCACCAGATGAAGAGTGGATTCCTTCTGGATGTTATAGTCCGAC 1793693 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | || || |||||||| || || |||||||| ||||| ||||| |||||||| || || Sbjct 1793694 AGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGG 1793753 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 ||||| || || ||||| || || || || || || ||||||| ||| ||||| ||||| Sbjct 1793754 ATTCCCTCCTTGTCCTGGATCTTTGCCTTGACGTTCTCAATCGTATCCGATGGCTCAACC 1793813 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | ||||||||||| || ||||| || ||||||||||| Sbjct 1793814 TCCAGAGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCAT 1793860 >seq113 Length=3238079 Score = 168 bits (186), Expect = 2e-36 Identities = 177/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 140505 TACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAA 140564 ||| |||||||||| | || || || |||||||| || || || || ||||| || || Sbjct 1949074 TACTTACCACCACGGAGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGAATGTTGTAG 1949133 Query 140565 TCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCA 140624 || || | || || ||||| || || || || || || ||||| ||||| |||||||| Sbjct 1949134 TCGGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCT 1949193 Query 140625 GGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGT 140684 || ||||| ||||| || ||||| || || || || ||||| || |||| || || || Sbjct 1949194 GGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCTCGATCGTGTCCGAAGGC 1949253 Query 140685 TCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || |||||||| | ||||| ||||| |||||||| || ||||||||||| Sbjct 1949254 TCGACCTCAAGTGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 1949306 >seq14 Length=697429 Score = 111 bits (122), Expect = 5e-19 Identities = 248/371 (67%), Gaps = 1/371 (0%) Strand=Plus/Minus Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 ||||||||||||| || |||||||| | || | | || | |||| || || || Sbjct 241833 AAAATGAAGGAAACGGCCGAAGCATACCTGGGACACTCTGTGAAGAATGCGGTCATCACG 241774 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 || ||||| || || ||||| |||||| || || || ||||| || || || Sbjct 241773 GTTCCAGCGTACTTCAATGACAGCCAGCGACAGGCCACGAAGGATGCCGGTGCGATCGCC 241714 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 ||||| || || || | || || || || || || || || || ||||| || ||||| Sbjct 241713 GGGTTGAACGTGCTGCGCATCATCAACGAGCCGACGGCGGCCGCCATTGCGTACGGGCTG 241654 Query 349742 GATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTT 349801 || || | | | | | || || | ||||| || ||| | || || ||||| || Sbjct 241653 GACAAGAAGGGGGCCGGCGAGCGGAACGTGCTTATCTTCGATCTCGGCGGCGGTACCTTC 241594 Query 349802 GATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGAT 349861 || || || | || || | || || || || ||||| || || | || || || || Sbjct 241593 GACGTGTCGATCCTCACGATCGAGGACGGTATCTTTGAGGTGAAGTCGACGGCCGGCGAC 241534 Query 349862 ACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTT 349921 || ||||| || || || || ||||| || || | || ||||| ||||| | || || Sbjct 241533 ACCCATCTCGGCGGCGAGGACTTTGACAACCGCATGGTGTCGCACTTTGTCGAGGAGTTC 241474 Query 349922 AAGCGTCAAGC 349932 ||||| ||||| Sbjct 241473 AAGCG-CAAGC 241464 >seq147 Length=717072 Score = 89.7 bits (98), Expect = 2e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 235889 GGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAA 235948 ||||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | Sbjct 232960 GGGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGAT 233019 Query 235949 ACCCAGCATCTCCA 235962 |||| ||||||||| Sbjct 233020 ACCCGGCATCTCCA 233033 >seq2414 Length=1144929 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| ||||||||| |||||| | | Sbjct 599419 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACTGGGATCGATA 599360 Query 235950 CCCAGCATCTCCA 235962 ||||||||||||| Sbjct 599359 CCCAGCATCTCCA 599347 >seq2380 Length=4596278 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 3458456 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 3458397 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 3458396 CCCGGCATCTCCA 3458384 Score = 87.8 bits (96), Expect = 5e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 4101102 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 4101161 Query 235950 CCCAGCATCTCCATAC 235965 ||| ||||||||| || Sbjct 4101162 CCCGGCATCTCCAGAC 4101177 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 4115007 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 4115066 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 4115067 CCCGGCATCTCCA 4115079 >seq2103 Length=1908487 Score = 87.8 bits (96), Expect = 5e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 24517 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 24576 Query 235950 CCCAGCATCTCCATAC 235965 ||| ||||||||| || Sbjct 24577 CCCGGCATCTCCAAAC 24592 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 26736 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 26677 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 26676 CCCGGCATCTCCA 26664 >seq2036 Length=1936590 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 1489477 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 1489418 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 1489417 CCCGGCATCTCCA 1489405 >seq1112 Length=6438948 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 659647 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 659706 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 659707 CCCGGCATCTCCA 659719 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 726617 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 726676 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 726677 CCCGGCATCTCCA 726689 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 728853 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 728912 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 728913 CCCGGCATCTCCA 728925 >seq1001 Length=2437691 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| ||||||||| |||||| | | Sbjct 543075 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACTGGGATCGATA 543134 Query 235950 CCCAGCATCTCCA 235962 ||||||||||||| Sbjct 543135 CCCAGCATCTCCA 543147 Score = 84.2 bits (92), Expect = 7e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 2393412 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 2393471 Query 235950 CCCAGCATCTC 235960 ||| ||||||| Sbjct 2393472 CCCGGCATCTC 2393482 >seq835 Length=219102 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 143080 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 143139 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 143140 CCCGGCATCTCCA 143152 >seq313 Length=561719 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 289889 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 289830 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 289829 CCCGGCATCTCCA 289817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515199593721869