Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq2381 284 1e-71 >seq2381 Length=1337761 Score = 284 bits (314), Expect = 1e-71 Identities = 1133/1753 (65%), Gaps = 48/1753 (3%) Strand=Plus/Plus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || |||| |||||||||||| || || | |||| ||||||| ||||| | || || | Sbjct 918532 GTACGCAGATAGTACATGCCAGTTTTCAAACCCATCTTCCAGCCGTAGAAATGGATCGAC 918591 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAG---ATGTTGAGCGACTGGGACTGGTCG 78306 | ||||||| ||| | | || |||| || | ||||||| ||| || ||||| ||| Sbjct 918592 GTCAGCTTG-CCATAGTTTGG--CTCCGCGACGTGAATGTTGAACGATTGCGACTGATCG 918648 Query 78307 ATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATG 78366 || ||||||| || || || ||||| | |||| || || || |||||||| | Sbjct 918649 ATAAACGCACCACGATCTGCGGCCATTTTGATGCACGTTTTCACCGAGATCTCCCATACC 918708 Query 78367 GTCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCC---AGCGCTTGTA-CGCTCCCACC 78422 || ||| | | | | || | | | || || | | ||| | || ||| | Sbjct 918709 GTTTTGTACAGGTCGCGAATTTCCTGCGGTATAGCCGCAATCTTTTGGATCGATCC-ATT 918767 Query 78423 GGCTCGCACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCCG 78482 | || |||||| ||||| || | | | ||| || || || | |||| | Sbjct 918768 GTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAAATCCTG 918827 Query 78483 GACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTT 78542 | || || |||| | || ||||||||| | ||| || | ||| | ||| Sbjct 918828 CAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTT 918887 Query 78543 GGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGG 78602 | ||||||||||||||| | || ||||| || | || || || || || || ||||| Sbjct 918888 CGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGG 918947 Query 78603 CATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTTA---- 78658 ||| || || | ||| || ||||| |||| ||| || | ||||| |||| | Sbjct 918948 CATCGGGGCCAACAGCAGCGAATTGCGAATACCGTGTTTGGCGATCTTTTCCTTCAACTC 919007 Query 78659 GGCC--GTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTC 78716 |||| || ||| | || ||| | | |||||| || || | ||| |||| Sbjct 919008 GGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAAGATGCCCTT 919067 Query 78717 GGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGA 78776 | | |||| |||| | |||||||||| | || || ||| | || || Sbjct 919068 GCTCACCGGACTGCCCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAACTCACAGCT 919127 Query 78777 CTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTT 78836 | | ||| || ||| ||| | || ||||| || || || |||| | |||| Sbjct 919128 CGCTTCCAGCGCGCCGTAGTAGATAGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTC 919187 Query 78837 GGTCTCGT-CGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGA 78895 || | | || ||| | || | || ||||| ||||||||| ||| || ||||||| Sbjct 919188 T-TCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCTTGCACGCCGA 919246 Query 78896 TAGCGATCGGTCGGTGGCGCATGTTG---CTCTTTCGGGCCGCCTCGGTCGGGTAAAAGT 78952 | ||||||| | ||||||||| ||| | ||| ||| | ||| |||| | Sbjct 919247 TCCCGATCGGCCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAA---T 919303 Query 78953 TCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGG 79012 | ||| |||| |||||| || ||||| || | || || || | || || | Sbjct 919304 TGACATCAATGATTTTGTTCAGATTGCGCGTCACTGTCTTAGCGACTTCCTTCAGCTTTG 919363 Query 79013 CGAAATCAAAATGATTTCCTTTGATG---AAAGTCGGT--AGGCACAGCGATGCCAGGTT 79067 | || ||| | | ||| ||| | ||| | | |||| | ||| ||||| || Sbjct 919364 CAAAGTCATAC-GTTTTGTCTTGCTTTACAAACATGTTCAAGGCG-ATCGAGGCCAGATT 919421 Query 79068 GCACACGGCCGTCTCGTCCG--GGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGAC 79125 ||| || || ||| ||| | | || | ||| | || || |||||||| || || Sbjct 919422 GCATACCGCTACCTCATCCTTCGACGAGTA--CTCCACAATCTCAGTGCACAAGTTGGAA 919479 Query 79126 GACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCAC 79185 | |||||||||||||| |||| |||||| || || || || || |||||||| | Sbjct 919480 CATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGC 919539 Query 79186 ATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAA-CGCCGTCC-CAGATGTCCCGGG 79243 ||||||||| ||||| || || || | || | ||| || ||||| || | | Sbjct 919540 ATGTACGGCACGCCGGTTTCCACTTGCGATTCGATTATCGCAAACCACAGAT--CCTGCG 919597 Query 79244 CCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAG 79303 || || | | | ||||||| | ||||| | ||||| || | ||| Sbjct 919598 CCTTCACCTGTCGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACT 919657 Query 79304 CCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCT 79363 | || || || || | || || || || |||||||||||||||||| ||| | Sbjct 919658 CTTCGCCCCAGGTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGGCTCCACATTT 919717 Query 79364 CGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGC 79423 ||| | ||| || || |||||| |||||||| |||||||| || || | ||| | Sbjct 919718 CGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTATCCACAGTGCGTAAAACATGTCCC 919777 Query 79424 GGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGG 79483 | || | |||||| | ||| ||| ||| |||||||| || | || ||| Sbjct 919778 GTGCGCGGACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATATATCGC 919837 Query 79484 CGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGA 79543 | ||||||||||| |||||||||||||| | || |||||| |||||||| | || Sbjct 919838 CATGCCACGGCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTACCGCCCTGATCGA 919897 Query 79544 CGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGT 79603 ||||||| ||||| |||||| | || || | ||| ||||| | |||| | | |||| Sbjct 919898 CGTACCGTGCCGTATTGTTGTAGACGCGCAACATCGGCACCAGACCGTTTGAAATCCCGT 919957 Query 79604 TCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGCCC 79662 |||| ||| ||| || || |||| ||||| | ||| || | ||||||||| Sbjct 919958 TCGTACCGGAGATGTACGTTCCCTTCGCGCGAAT-ACAGTGCACGTTCAGTCCGATGCCA 920016 Query 79663 CCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAG 79722 |||| | |||| || || | || |||| ||| ||||| |||||||||||||| || Sbjct 920017 CCGGCCGACTTTGAAATTAGGGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAATGCTA 920076 Query 79723 TCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTG 79782 || || ||| | | |||||||||| ||| | ||| ||| | |||| | || Sbjct 920077 TCTTCGGACATGGTCAACAGGAAGCAGGACGAAAGCTGGGGGCGCTGCGTAGCCGCCGCA 920136 Query 79783 AAGAGGGTCGGCGTCGCGTGCGTGAAG-AACTTTTGGCTCATCAGATCGTACGTCTCCTT 79841 || | || |||| ||||| || ||| ||| | || || ||||| ||| ||||| | Sbjct 920137 AACATAGTTGGCGAGGCGTGGGTAAAGTAACGCTCGG-ACAGCAGATTGTAGGTCTCGAT 920195 Query 79842 GACGC-GC-GGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGG 79899 ||| || || ||| ||||| |||||||| | || |||||||| | | || |||| Sbjct 920196 --CGCTGCATCGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCTGG 920253 Query 79900 GGCGTCTCGCCGA 79912 || |||| ||| Sbjct 920254 GGGCGCTCGACGA 920266 Score = 277 bits (306), Expect = 2e-69 Identities = 1116/1730 (65%), Gaps = 52/1730 (3%) Strand=Plus/Minus Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTC----CCGCGAGTCCGCGAGACATA 19173 ||||| || || | |||||||||||||| ||| || | |||| |||||| || Sbjct 920240 ATGCGCGTTGCTATTGGCATCCATGGCGAGGACATCGATGCAGCGAT----CGAGACCTA 920185 Query 19174 CGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTAC 19233 | | ||| || | || | ||| || ||||| |||| || | || || | ||| Sbjct 920184 CAATCTGCTGTCCGAGCGTTACTTTACCCACGCCTCGCCAACTATGTTTGCGGCGGCTAC 920125 Query 19234 GAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGG 19293 | | ||| ||| | ||| ||| ||||| || | ||| || || ||||||||||| Sbjct 920124 GCAGCGCCCCCAGCTTTCGTCCTGCTTCCTGTTGACCATGTCCGAAGATAGCATTGAGGG 920065 Query 19294 CATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGAT 19353 ||||||||| ||||| ||| |||| || | || || |||| | |||| || ||||| | Sbjct 920064 CATCTACGACACGCTGAAGCAGTGTGCCCTAATTTCAAAGTCGGCCGGTGGCATCGGACT 920005 Query 19354 CCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCG 19412 || ||| | ||| || ||| || || ||| || |||||||| | | Sbjct 920004 GAACGTGCAC-TGTATTCGCGCGAAGGGAACGTACATCTCCGGTACGAACGGGATTTCAA 919946 Query 19413 ACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGG 19472 ||||| | || || ||| | ||||||| |||||| ||||| |||||||| | ||||| | Sbjct 919945 ACGGTCTGGTGCCGATGTTGCGCGTCTACAACAATACGGCACGGTACGTCGATCAGGGCG 919886 Query 19473 GCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGG 19532 | ||| || || | ||||||||||| |||||||| ||||| | || | | | Sbjct 919885 GTAACAAGCGGCCTGGAGCATTCGCCATCTATCTCGAGCCGTGGCATGGCGATATATTCG 919826 Query 19533 ATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCA 19592 | || ||||| ||| ||| || | |||||| | ||| || ||| | || Sbjct 919825 AGTTTCTCGATCTGAAGAAAAACACCGGCAAGGAGGAGGTCCGCGCACGGGACATGTTTT 919766 Query 19593 CGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACC 19652 || ||||||| |||||||| |||||| || || ||| | ||||| ||| || Sbjct 919765 ACGCACTGTGGATACCGGACCTGTTCATGCAGCGTGTGGAGGCGAACGAAATGTGGAGCC 919706 Query 19653 TGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGT 19712 |||||||||||||||| || || || ||| | ||| || ||||| | |||| | || Sbjct 919705 TGATGTGCCCGCACGATTGTCCCGGGCTATCGGACACCTGGGGCGAAGAGTTCGAGAAGC 919646 Query 19713 TGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTCT 19772 ||||| | |||| |||| || || | | ||| ||| | ||| ||| Sbjct 919645 TGTACACGGGGTACGAGAAAGAGGGTCGCTTTATGCGACAGGTGAAGGCGCAGGA--TCT 919588 Query 19773 G-GGACCGCG-TCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGA 19830 | || ||| | || || || || || |||||| ||||||||| |||||||| Sbjct 919587 GTGGTTTGCGATAATCGAATCGCAAGTGGAAACCGGCGTGCCGTACATGCTGTACAAGGA 919528 Query 19831 CGC-CGCGAACG-CCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTG 19888 || || | || |||| || ||| |||| |||||| | ||||| | |||||| || Sbjct 919527 TGCTTGCAATCGTAAAAGT--AACCAGCAGAATATCGGCACCATCAAATGTTCCAACTTG 919470 Query 19889 TGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCC 19948 || ||||| || ||||| || | ||| ||| || || || |||||||| || Sbjct 919469 TGCACTGAGATTGTGGAGTACTCGTCGAAGGATGAGGTAGCGGTATGCAATCTGGCCTCG 919410 Query 19949 CTGTGCCTGCCGACTTTCGTCAAG---GCCTCCTCCTTCGACTTTGCCAAATTGTACGAG 20005 | | || | || || ||| | | | | |||||||| || || | || Sbjct 919409 ATCGCCTTGAACATGTTTGTAAAGCAAGACAAAACGTATGACTTTGCAAAGCTGAAGGAA 919350 Query 20006 GTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCC---G 20062 || | | || ||||| |||||||| |||| ||| || | || || | Sbjct 919349 GTCGCTAAGACAGTGACGCGCAATCTGAACAAAATCATTGATGTCAATTACTATCCCGTG 919290 Query 20063 ACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGC 20122 | ||||| |||| || |||||||||||| ||||||||| ||||||||| || ||| Sbjct 919289 CCGGAGGCTAAGCGC---TCCAATATGCGCCACAGGCCGATCGGGATCGGCGTGCAAGGC 919233 Query 20123 CTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCA-AGGCGCGCGAGCT 20181 ||||||| | ||||| || | || | | ||| | | | |||| | |||| Sbjct 919232 ATGGCCGATGCGTTCATCCTGATGCGCTATCCGTACGA-AAGCGAAGAGGCTCAAAAGCT 919174 Query 20182 CAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCG---TGCGAACT 20238 || || || ||||| | | ||| ||| || |||||| || || || | Sbjct 919173 AAATCAGCAAATATTCGAAACTATCTACTACGGCGC---GCTGGAAGCGAGCTGTGAGTT 919117 Query 20239 CGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCT 20298 ||| || || ||||||||||||| | |||| || | | | |||| ||| | Sbjct 919116 GGCCGCTCGAGATGGTCCGTACGAGACGTACGAGGGCAGTCCGGTGAGCAAGGGCATCTT 919057 Query 20299 CCAGCCGGACATGTGGGGC--GTCACTGA-GAATGAGT---TTTGGAGCGCCCTCAAGGT 20352 ||| || |||||| | | || || | || || ||| || | |||| Sbjct 919056 GCAGTACGAGATGTGGAACAAGGAACCGACGGATCTGTGGAACTGGGCCGAGTTGAAGGA 918997 Query 20353 TGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTC 20412 ||||| | ||||| ||||||| ||| |||| | || || |||||||| || || Sbjct 918996 AAAGATCGCCAAACACGGTATTCGCAATTCGCTGCTGTTGGCCCCGATGCCGACGGCTTC 918937 Query 20413 GACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTACTT 20472 || || || || | || ||||| || | ||||||||||||||| | ||| | ||| Sbjct 918936 CACGGCACAAATTCTCGGCAACAATGAATCGTTCGAGCCGTACACGTCGAACGTTTACAA 918877 Query 20473 GCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGTCCGCGACTTGCA 20532 | || ||| | || |||||| |||| ||| | || || | | || ||| Sbjct 918876 TAGGCGCGTGCTGTCGGGCGAGTTCCAGGTGGTGAACCATCATCTTCTGCAGGATTTGAC 918817 Query 20533 GAAGATCGATATGTGGTCGCCCAAAATTAAGAATGAAAT--TGTCCGAGCCGGCGGGAGC 20590 || || | | ||||| | | | || ||||| ||||| ||||| | ||| | Sbjct 918816 CAACATGGGTCTGTGGGATCTCGACATGAAGAACGAAATTCTGTCCAA---CAATGGATC 918760 Query 20591 G-TCC-AGGCATT--GGATATCCCCCAGAACCTCAAGGACATTTACAGGACCGTATGGGA 20646 | ||| | ||| || ||| || ||| | | ||| | |||| || |||||||| Sbjct 918759 GATCCAAAAGATTGCGGCTATACCGCAGGAAATTCGCGACCTGTACAAAACGGTATGGGA 918700 Query 20647 AATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTC 20706 ||| | ||| | |||| | ||||| || ||||| || || | ||||| ||||| Sbjct 918699 GATCTCGGTGAAAACGTGCATCAAAATGGCCGCAGATCGTGGTGCGTTTATCGATCAGTC 918640 Query 20707 CCAGTCGCTCAATGTCTTCATGGAGAATCCGAGC-CTGGCGAAGCTGAGCTCCATGCATA 20765 || ||| |||| | | | | | | || | | |||| ||||||| || || ||| Sbjct 918639 GCAATCGTTCAACATTCACGTCGCGGAGCCAAACTATGGC-AAGCTGACGTCGATCCATT 918581 Query 20766 TGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCGGACC 20815 | ||||||||| | | ||| | || || ||||||||||||||||| ||| Sbjct 918580 TCTACGGCTGGAAGATGGGTTTGAAAACTGGCATGTACTATCTGCGTACC 918531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548505443931120