Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq224 111 1e-19 seq113 82.4 5e-11 >seq224 Length=3387546 Score = 111 bits (122), Expect = 1e-19 Identities = 160/221 (72%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| ||| |||||| ||||| || |||||||| || || || || || Sbjct 1793643 AGACGGAGCACCAGATGAAGAGTGGATTCCTTCTGGATGTTATAGTCCGACAGGGTGCGG 1793702 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| || || || || || || || | |||||| || || ||||| | ||||||| Sbjct 1793703 CCATCTTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCC 1793762 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCT--CTCCACTTCCACG 34665 ||||| |||| |||| || ||| | ||| || || || | ||| || |||| Sbjct 1793763 TTGTCCTGGATC-TTTGCCTTGACGTTCTCAATCGTATC--CGATGGCTCAACCTCCAGA 1793819 Query 34666 GTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || ||||| | |||||||| ||||||||||| Sbjct 1793820 GTGATGGTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCAT 1793860 >seq113 Length=3238079 Score = 82.4 bits (90), Expect = 5e-11 Identities = 153/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 || |||| ||||| ||| || || ||||| |||||||| || || || || || || Sbjct 1949089 AGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGA 1949148 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || ||||| || || | |||||| || || || || | || ||| Sbjct 1949149 CCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCTTCC 1949208 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||||||| | || || | || ||||| ||| || || | || Sbjct 1949209 TTGTCCTGGATCTTT-GCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGT 1949267 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 || || || ||||| | |||||||| |||||||||||||| Sbjct 1949268 GATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCATGTT 1949309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314718771629759