Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq113 140 8e-28 seq224 125 2e-23 >seq113 Length=3238079 Score = 140 bits (154), Expect = 8e-28 Identities = 166/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| |||| ||| || || || || || ||||| || || | ||||| |||| | ||| Sbjct 1949085 ACGGAGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGAGAGAGT 1949144 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| || || || || || || ||||| || Sbjct 1949145 GCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCC 1949204 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| ||||||||| ||||||| ||||| ||||| || | || || || | Sbjct 1949205 TTCCTTGTCCTGGATCTTTGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAG 1949264 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||||||| || | ||||| | ||| | ||||| || Sbjct 1949265 TGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCATGTT 1949309 >seq224 Length=3387546 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || || || ||||||||||| || |||| || || || | || || | |||||| Sbjct 1793649 AGCACCAGATGAAGAGTGGATTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCT 1793708 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || || || ||||| || || |||||||| Sbjct 1793709 TCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCC 1793768 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||||||| ||| || || || || || || | || || || | ||||| ||| Sbjct 1793769 TGGATCTTTGCCTTGACGTTCTCAATCGTATCCGATGGCTCAACCTCCAGAGTGATGGTC 1793828 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||| |||||| | ||| | ||||| Sbjct 1793829 TTTCCGGTCAGAGTTTTCACGAAAATCTGCAT 1793860 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || || || || ||||| || || |||| || || || | || || | ||||| Sbjct 1793877 AGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCC 1793936 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || || || ||||| || || |||||||| Sbjct 1793937 TCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCC 1793996 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| || || || || || | ||| || || | ||||| ||| Sbjct 1793997 TGGATCTTCGCCTTCACATTCTCAATCGTATCGGATGGTTCGACCTCGAGGGTGATGGTC 1794056 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || |||| |||||| | ||| | ||||| || Sbjct 1794057 TTTCCGGTCAGAGTTTTCACGAAAATCTGCATATT 1794091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192488066519162