Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq113 122 2e-22 seq224 113 1e-19 >seq113 Length=3238079 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || |||||||| || ||||| || ||||||||||| |||| | || | ||||| Sbjct 854918 AGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCATCC 854859 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | |||||| || | || |||||| ||||| || Sbjct 854858 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCC 854799 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || ||| |||| | | || || ||| || ||||| ||||| || Sbjct 854798 TGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTC 854739 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || |||||||| || || ||||||| |||||| || Sbjct 854738 TTACCCGTGAGGGTTTTGACGAAGATCTGCATCTT 854704 Score = 122 bits (134), Expect = 2e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||||| || || |||||||| || || || || || |||||||| |||| | ||| | Sbjct 1949088 GAGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCG 1949147 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || ||||||||||| || | |||||| || | | || ||||| Sbjct 1949148 ACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCTTC 1949207 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || ||| || ||| |||| | |||| ||| ||| || ||||| || Sbjct 1949208 CTTGTCCTGGATCTTTGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGT 1949267 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || ||||| ||||| || |||||||| | |||||| || Sbjct 1949268 GATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCATGTT 1949309 >seq224 Length=3387546 Score = 113 bits (124), Expect = 1e-19 Identities = 155/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || ||||||||||| || || || |||||||| || || | | || | ||||| Sbjct 1793648 GAGCACCAGATGAAGAGTGGATTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATC 1793707 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 ||| || ||||| || |||||||| || | |||||| || | || |||||| ||||| Sbjct 1793708 TTCCAGCTGCTTT--CCAGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTG 1793765 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 || || || ||| ||||| |||| | | || || ||| || || ||||| || Sbjct 1793766 TCCTGGATCTTTGCCTTGACGTTCTCAATCGTATCCGATGGCTCAACCTCCAGAGTGATG 1793825 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||| |||||||| | |||||| Sbjct 1793826 GTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCAT 1793860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153779066662233