Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq9239 111 2e-19 >seq9239 Length=1433044 Score = 111 bits (122), Expect = 2e-19 Identities = 185/263 (70%), Gaps = 6/263 (2%) Strand=Plus/Plus Query 119777 TCGAATTTCATATATCGTATCTTTCCGAACACGGTACGTTCCTTCCACGCTCTG-TCGTG 119835 ||| | ||||| |||| ||| || ||||| | | ||||||||||| | ||| ||||| Sbjct 683269 TCGTAGTTCATGTATCTTATTTTACCGAAGATGTCCCGTTCCTTCCATCC-CTGATCGTG 683327 Query 119836 GAGCCCCGCTACGGCCCATAGGCATCCCACGTATCCGTTGGGATCCGTTCCATCTAACTC 119895 | || || | | ||| | ||| || ||||| ||||| || || ||||||| Sbjct 683328 AATTCCAGCGATCGACCACATGCAACCGACGTACCCGTTCGGGTCGCGCCCATCTAGGCT 683387 Query 119896 GTATTTATCGTTTAAGTAGATACAGACGCTTAACGCACTT--TCAGGAGTCTCGCTCCAT 119953 ||| |||||| | |||||| | ||| | || ||| || || || | |||||| Sbjct 683388 GTAACGATCGTTCAGGTAGATC--GCCGCCTCGAGCGCTTCCTCGGGCGTTTTGCTCCAC 683445 Query 119954 TCCAGTAtttttttAGCCCAGTACATACGTAAGTATCCATGCATTTTACCTTCACGAACC 120013 || ||||| || || ||||||||||| || | | |||||||||| || || || ||| Sbjct 683446 TCGAGTATCTTCTTCGCCCAGTACATCCGCAGGAATCCATGCATCTTGCCCTCCTTCACC 683505 Query 120014 ATTTGAAGTTGTGCGGCGTTCCA 120036 || || || || ||||||||||| Sbjct 683506 ATCTGCAGCTGGGCGGCGTTCCA 683528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517483546282560