Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq9239 105 7e-18 >seq9239 Length=1433044 Score = 105 bits (116), Expect = 7e-18 Identities = 193/278 (69%), Gaps = 6/278 (2%) Strand=Plus/Plus Query 118930 TCGAATTTCATGTATCGTATCTTTCCAAATACGGTACGCTCCTTCCATGCTCTG-TCGTG 118988 ||| | |||||||||| ||| || || || | | || ||||||||| | ||| ||||| Sbjct 683269 TCGTAGTTCATGTATCTTATTTTACCGAAGATGTCCCGTTCCTTCCATCC-CTGATCGTG 683327 Query 118989 GAGTCCTGCTACTGCCCATAGACATCCCACGTATCCGTTGGGATCTGTTCCGTCTAACTC 119048 | ||| || | | ||| | || || ||||| ||||| || || || |||| Sbjct 683328 AATTCCAGCGATCGACCACATGCAACCGACGTACCCGTTCGGGTCGCGCCCATCTAGGCT 683387 Query 119049 GTACTTATCGTTTAAGTAGATACAGACGCTTAACGCACTT--TCCGGAGTCTTACTCCAT 119106 ||| |||||| | |||||| | ||| | || ||| || || || || ||||| Sbjct 683388 GTAACGATCGTTCAGGTAGATC--GCCGCCTCGAGCGCTTCCTCGGGCGTTTTGCTCCAC 683445 Query 119107 TCCAGTAtttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGTTAATC 119166 || ||||| || || ||||||||||| || | | || ||||| || ||||| || | | Sbjct 683446 TCGAGTATCTTCTTCGCCCAGTACATCCGCAGGAATCCATGCATCTTGCCCTCCTTCACC 683505 Query 119167 ATCTGAAGTTGTGCGGTGTTCCATAGAGGATCGTGTGT 119204 ||||| || || |||| |||||| ||| ||||| || Sbjct 683506 ATCTGCAGCTGGGCGGCGTTCCACAGATCGTCGTGCGT 683543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511353081413440