Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 277 2e-69
>seq9207
Length=1443628
Score = 277 bits (306), Expect = 2e-69
Identities = 818/1253 (65%), Gaps = 21/1253 (2%)
Strand=Plus/Minus
Query 53423 TCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCT 53482
||||| || ||||| | || || || || ||||| || ||||||| || || || | |
Sbjct 1178537 TCACAGCTAGCCTCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCAGCTTT 1178478
Query 53483 TGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGA 53542
||||||||| || || | |||| | |||||| ||||| || || | ||| ||
Sbjct 1178477 TGTGCTTCCTCACTTTCGTACGGATGGCGCATGAGAATGAACGCATCGGCCATTCCCTGC 1178418
Query 53543 ACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAA 53602
|| || ||||||||||||| || | | | || || | || || || | || ||
Sbjct 1178417 ACGCCGATACCGATAGGTCGGTGGCGCATGTTGGAACGCTTCGCCTCCGGCACCGGGTAG 1178358
Query 53603 TAATTAATATCTATAATTTTATTGAGGTTTC---TGACAATTACTTTGACCACATCCTTC 53659
|| || || || || ||||| || ||||| | |||| || ||| | || ||||||
Sbjct 1178357 TAGTTGATGTCGATGATTTTGTTCAGGTTGCGCGTGACGATC---TTGGCGACCTCCTTC 1178301
Query 53660 AGTTTGAGAAAATCAAATTGTCCATCTA---TTACAAACATGTTCAATGCAATAGATGCC 53716
|| || | || || | | ||| | ||||||||||||| ||||| || |||
Sbjct 1178300 AGCTTCACGAAGTCGTACGTGCGATCCGGCCTCACAAACATGTTCAGCGCAATCGACGCC 1178241
Query 53717 AGATTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATCTCAGTGCAAAGAT 53774
||||| || || || | || | | || || || | | ||||| ||||| || |
Sbjct 1178240 AGATTGCACACCGCAATTTCGTC--CTTCGACGAGTACTCGACGATCTCCGTGCACAGGT 1178183
Query 53775 TACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 53834
| |||||||| || || | || || || || ||||| ||| ||||||||||| |
Sbjct 1178182 TCGAGCACTTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCCTTGT 1178123
Query 53835 AAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACAC 53894
| || ||| | ||| || || || | ||| || || || ||||| ||| | |
Sbjct 1178122 AGAGCATGTACGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAACCACAGATCCT 1178063
Query 53895 GAGCCTTTA--TTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTC 53952
| ||||| | | ||| | | | ||| | ||||| || |||| || ||
Sbjct 1178062 GCGCCTTCACCTGCCGGAT--GAACCGACCTTCCTTCTCGTAGCCCGTGTACAGCCGCTC 1178005
Query 53953 AAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCA 54012
|||||| || ||||| | || || || || || | ||||||||| | |||
Sbjct 1178004 AAACTCTTCGCCCCACGACTCCGACAGCCCGGGGCAGTCGTGCGGACACATAAGGCTCCA 1177945
Query 54013 CTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 54072
| | ||| ||| ||| || ||||| || ||||| || | ||| || || || |
Sbjct 1177944 CATTTCGTTCGCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAGCGCGTAGAACAT 1177885
Query 54073 ATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 54132
|| | | | ||||| || || || || || || |||||||| ||| | | |
Sbjct 1177884 GTCACGCGCACGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGAAACTCAAACAC 1177825
Query 54133 ATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTG 54192
||| ||||||||| || | ||| |||| | | || || || ||||| || |||||
Sbjct 1177824 ATCGCCATGCCACGGCTCGAGGTAGATGGCGAACGCACCGGGACGCTTGTTGCCGCCCTG 1177765
Query 54193 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGC 54252
|| | || | || ||||| || || || | || ||| |||| | || |||||
Sbjct 1177764 GTCCACATACCGGGCCGTGTTGTTGTAGACACGCAGCATCGGAACCAACCCGTTGGAGAT 1177705
Query 54253 ACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCT 54310
||| || || || | || || | || | || || || | | | || | ||||
Sbjct 1177704 ACCGTTCGTGCCCGCAATGTACGTACCCTTCGCCCGGATGCAGTGCACGTTCA--GACCA 1177647
Query 54311 ATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 54370
|| || || || || ||||| | |||||| | || | ||| || || || |||||
Sbjct 1177646 ATGCCTCCGGCGGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAAATTCCCTCG 1177587
Query 54371 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 54430
||||| || ||| ||| | || ||||| ||| |||| |||| | || || ||
Sbjct 1177586 ATACTGTCGTCCGACATCGTTAGGAGAAAGCAGGACGACAGTTGGGGCCGCTGCGTGGCC 1177527
Query 54431 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 54490
|| ||| | ||| || || ||||||||||| || || ||||| | |||||||||
Sbjct 1177526 GCCGCAAACATGGTCGGCGAGGCGTGCGTAAAGTATCGCTCCGAAAGCAAATTGTACGTT 1177467
Query 54491 TCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 54550
||||| || | || || ||| || || || | || || ||||| | |||||||
Sbjct 1177466 TCGATTGCCGCATCGATGTCCTCGCCGTGGATCCCGATGGCAACGCGCATCAGCATGTGC 1177407
Query 54551 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTA 54610
|| |||| ||| ||||||||| || || ||||||| |||||| ||| | |||||
Sbjct 1177406 TGCGGTCGTTCGACGATCTTGCCCTTGATCTTCAGCAGGTAGGACCGTTCGAGCGTTTTG 1177347
Query 54611 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAG 54663
|| |||||||| ||||| |||||| || ||||| || || | ||||| ||
Sbjct 1177346 AAGCCAAAATAATTGTACCCAAAGTCGCGATCGTAGATGATGGCCGAGTTCAG 1177294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593650412780160
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