Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq9254 228 8e-55
seq9240 143 3e-29
seq9325 120 3e-22
seq8738 113 5e-20
seq8899 104 2e-17
>seq9254
Length=4138565
Score = 228 bits (252), Expect = 8e-55
Identities = 310/430 (72%), Gaps = 2/430 (0%)
Strand=Plus/Minus
Query 116946 TGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCT 117005
|||| || |||||||| ||| | ||||| || || ||||||| || ||||| ||| ||
Sbjct 2197471 TGTTCAATGCCATCGAAACGCTACCGTGTGTGAAGAAGAAGGCTGACTGGGCACTGAACT 2197412
Query 117006 GGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGG 117065
|||| | ||| | ||| |||||||||||| | || || || || ||||||||||
Sbjct 2197411 GGATTTCGAGCAAGAAAGCCAACTTCGGCGAGCGTGTTGTCGCGTTTGCCGCCGTCGAGG 2197352
Query 117066 GCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGC 117125
| | ||||| ||||| || ||||| || || ||||| ||||| || || || ||||
Sbjct 2197351 GAATTTTCTTCAGCGGCAGCTTTGCCGCTATCTTCTGGCTTAAGAAGCGAGGACTGATGC 2197292
Query 117126 CCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTG 117185
| ||| |||| ||| |||||||| || || | |||||||| |||| || |||||||
Sbjct 2197291 CAGGCTTGACCTTCTCGAACGAGCTGATTTCGCGTGACGAGGGCTTGCACTGTGACTTTG 2197232
Query 117186 CCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA-GCGCGGCGCGCGTCAGGGAGATC 117244
| || | ||||||| | |||| || |||| |||| | ||| || | |||
Sbjct 2197231 CTTGCCTTATGTTCAAATACCTGGTTCAAAAGCCGACGCGC-GAGCGTGTGACTAGCATC 2197173
Query 117245 GTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTG 117304
| ||| ||||| | ||||| ||| ||||| ||| | |||||||| || | ||
Sbjct 2197172 ATTCGCGATGCGGTGGTAATCGAACAGGAGTTCCTTACCAAGGCGCTGCCAGTCGATATG 2197113
Query 117305 CTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTG 117364
||||| | || || || ||||||||| |||||||||||||| |||||| ||||||||
Sbjct 2197112 CTGGGCATGAACTGTGACCTGATGTCGCAGTACATCGAGTTCGTTGCCGACCGGCTGCTG 2197053
Query 117365 CTCGAGCTGG 117374
||||| |||
Sbjct 2197052 GTCGAGTTGG 2197043
Score = 223 bits (246), Expect = 4e-53
Identities = 207/263 (79%), Gaps = 0/263 (0%)
Strand=Plus/Minus
Query 116655 AGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACT 116714
|||||||||| || |||||||| || |||||||| ||||| || ||||||| || ||||
Sbjct 2197841 AGGCCGAGGCATCTTTCTGGACGGTAGAGGAGGTAGACCTCTCGAAGGACATGAAGGACT 2197782
Query 116715 GGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCG 116774
||||| ||||| | ||| || || |||||| ||||||||| || || |||||||
Sbjct 2197781 GGGAGTCGTTGAAACCGAGCGAACGTCACTTCATCTCGCACGTGCTCGCTTTCTTCGCCG 2197722
Query 116775 CCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGG 116834
| ||||| ||||||||||||||||||||||| || ||| ||||| |||||||||
Sbjct 2197721 CATCGGACGGAATCGTCAACGAGAATCTGGTCGAACGATTCAGCCAGGAAGTGCAGGTGA 2197662
Query 116835 CCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGT 116894
|||| ||||| |||||||| || || |||||||| ||||| ||||| ||| || ||||
Sbjct 2197661 CCGAAGCGCGCTGCTTCTATGGTTTCCAGATCGCGATGGAAAACGTCCACAGCGAGATGT 2197602
Query 116895 ATTCGACCCTCATCGACACGTAC 116917
| || || ||||||||||||
Sbjct 2197601 ACTCCCTGCTGATCGACACGTAC 2197579
>seq9240
Length=943838
Score = 143 bits (158), Expect = 3e-29
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| ||||| |||||||| || ||||| ||| | || ||||| ||
Sbjct 630586 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 630527
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| || | | | | | |||| || || | ||||| ||||||||||| |||||
Sbjct 630526 TCGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGAC 630467
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| || || |||| ||| ||||| |||||||| || | ||||| || |||||||
Sbjct 630466 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGACGCACGCTGTCCGACTAC 630407
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905
||||| ||||||||| | || || ||||| ||| |||||
Sbjct 630406 AACATTCAGAAGGAGTCGACCCTCCATCTGGTGCTGCGC 630368
>seq9325
Length=2359367
Score = 120 bits (132), Expect = 3e-22
Identities = 144/193 (75%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
|||||| || ||||| || ||||| || ||||| |||||||| |||| ||||| | |
Sbjct 260903 AATGCAGATTTTCGTGAAGACGCTGACTGGCAAGACCATCACTCTCGAGGTCGAGCCTTC 260962
Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
|||| | | | |||| |||||| || || | ||||| ||||| || ||| | || |
Sbjct 260963 GGACACCATCGAGAACG-TCAAGGCTAAGATCCAGGACAAGGAGGGTATTCCCCCAGATC 261021
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
|||| || | |||| ||| || || |||||||| |||| || || || ||||||||
Sbjct 261022 AGCAGCGTTTGATCTTCGCTGGAAAGCAGCTGGAGGACGGACGTACTCTGTCCGACTACA 261081
Query 40868 ACATCCAGAAGGA 40880
|||||||||||||
Sbjct 261082 ACATCCAGAAGGA 261094
>seq8738
Length=1280009
Score = 113 bits (124), Expect = 5e-20
Identities = 153/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| ||||| || || || || || || |||||||| | || || || | |
Sbjct 1177434 AATGCAAATTTTCGTCAAGACCCTGACTGGAAAGACCATCACGTTGGAGGTTGAGCCTTC 1177375
Query 40749 CGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
|||| | || || | | |||| || |||| ||||| ||||| ||||| | || |
Sbjct 1177374 GGACACGATTGAGAATG-TGAAGGCCAAGATTCAGGACAAGGAGGGAATCCCTCCAGATC 1177316
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
|||| || ||||||| || ||||| |||||||| || | || ||||| || ||||
Sbjct 1177315 AGCAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGTACCCTTTCGGATTACA 1177256
Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||||| | || || ||||| ||
Sbjct 1177255 ACATCCAGAAGGAGTCTACTCTCCATCTGGT 1177225
Score = 107 bits (118), Expect = 2e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| || || || ||||| || |||||||| | || || || |
Sbjct 1177664 AAGATGCAGATTTTCGTCAAGACCCTTACGGGAAAGACCATCACGTTGGAGGTGGAGCCT 1177605
Query 40747 ACCGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
| |||| | || || | | |||| || |||| ||||| ||||| ||||| | ||
Sbjct 1177604 TCGGACACGATTGAGAATG-TGAAGGCCAAGATTCAGGACAAGGAGGGAATCCCTCCAGA 1177546
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
||||| || ||||||| || ||||| |||||||| || | || || || || ||
Sbjct 1177545 TCAGCAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGTACTCTTTCGGATTA 1177486
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||||||| | || || ||||| ||
Sbjct 1177485 CAACATCCAGAAGGAGTCTACTCTCCATCTGGT 1177453
>seq8899
Length=3132144
Score = 104 bits (114), Expect = 2e-17
Identities = 155/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 40685 GAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAG 40744
|||| ||||| || ||||| ||||| ||||| ||||| ||||||||| | || |||||
Sbjct 384684 GAAAGATGCAGATTTTCGTGAAAACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGC 384625
Query 40745 CCACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804
| | |||| | | | | |||| ||||||| || || || || || || | |
Sbjct 384624 CGTCGGACACGATCGAGAATGTGAAGGCGAAAATTCAGGATAAGGAAGGAATTCCGCCAG 384565
Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864
| || || || || |||| ||| || || |||||||| || | || || || ||||
Sbjct 384564 ATCAACAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGATGGCCGTACGCTTTCGGACT 384505
Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||||||| ||||||||| | || || || || || ||||
Sbjct 384504 ACAACATTCAGAAGGAGTCGACCCTTCACCTGGTTCTGCG 384465
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515157425217920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |