Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 232 6e-56
seq9325 131 1e-25
seq9240 123 2e-23
seq8899 116 3e-21
seq8738 111 1e-19
>seq9207
Length=1443628
Score = 232 bits (256), Expect = 6e-56
Identities = 759/1161 (65%), Gaps = 44/1161 (4%)
Strand=Plus/Minus
Query 132864 GCGACGGTTTCGAC--GTCGACGGTAAACTTTGTGGCCTGAGCGGCGGGTTTTGTGCGCA 132921
|||| ||||||| ||| || ||||||| | || | |||| || || |||||||
Sbjct 1179178 GCGATAGTTTCGATTTGTCCACCGTAAACTGGATCGCGTTCACGGCCGGCTTGGTGCGCA 1179119
Query 132922 AATAATACATGCCCGTTTTCAGTTTTTTCTCCCACGCGTAAAAGTGTATGCTCGACACCA 132981
||| ||||||||||| ||||| ||| ||| |||| ||||| || || || |
Sbjct 1179118 GATAGTACATGCCCGTCTTCAGGCCCATCTTCCAGCCGTAGAAGTGAATCGACGTCAGCT 1179059
Query 132982 CCGAGTAAGTGGGTTCGGCGACAAATAAATTCAGCGATTGACTCTGATCTATGAAAGGAG 133041
||| | |||||||| || | || | ||| || |||||| ||||| | |
Sbjct 1179058 TGCCGTAGTTCGGTTCGGCCACGTGAATGTTGAACGACTGGGACTGATCGATGAACGCAC 1178999
Query 133042 CACGGTCGGCGGCCATGTTTATTATACACTTT----GATTTGATCTCCCATGCCGTCTTG 133097
| ||||| |||||||| || || || ||| ||| |||||||| ||||||||
Sbjct 1178998 CCCGGTCCGCGGCCATTTTGATGC-ACGTTTTCACCGAT---ATCTCCCACACCGTCTTG 1178943
Query 133098 AAGAGATTCTTGACATGCTGTGGTATTTCGTCAATGTTCTGCACGGACCCGTTTTCGGCC 133157
| || | || ||||| || ||||| || || ||| | || ||||| | ||
Sbjct 1178942 TACAGGTCGCGGATGTGCTGCGGAATTTCCTCGATCCGCTGTATCGAACCGTTGTGCGCA 1178883
Query 133158 AAAATCTTGTTGCGCAATTCCGGAGTGTAAATGTCGAGATCGATTAGCGCTTTGACGAGA 133217
| || | ||| || || | | | | |||| ||| | || | | | |||
Sbjct 1178882 AGGATTTGGTTCTTCATATCGTCATCCCACAGGCCGAGTTCGGTCAGATCCTGCAGCAGA 1178823
Query 133218 TACTGGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAGATATACATTCGACGTG 133277
| ||||||||||| || |||||||| | || ||||| | || || ||||| |||
Sbjct 1178822 TGGTGGTTGACCACCTGGAACTCGCCCGACAGCACGCGCCGATTGTAGACGTTCGAAGTG 1178763
Query 133278 AACGGTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATGTAC 133337
|||| ||||| || ||||||||||| || || || ||||| | || || |||||
Sbjct 1178762 TACGGCTCGAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGCATCGGT 1178703
Query 133338 GCCACCAACAAAGAGTTTCTTACGCCGTACTTGTTTATGTTGCACTGCAATTCGTTCCAG 133397
|||| || | || || | | || | |||| || || || || ||| ||||
Sbjct 1178702 GCCAGCAGGAGCGAATTCCGGATACCATGCTTGGCAATCTTTTCCTTCAGCTCGGCCCAG 1178643
Query 133398 TCCCACAGATT-GTTGGAATGATAGACGCCGTTCTCGTCGTCGTAGTTGTGAAAATGCAA 133456
| |||||| | ||||| | | | || | | | |||||| | |||
Sbjct 1178642 TTCCACAGGTCCGTTGGGGTCTT---CTCC---CACAT-GTCGTACT---------GCAG 1178599
Query 133457 AATACCCCTGCTCACCGGACTGTCCGTGTACGATTCATAGGGTCCGTTGATTTTGGCCAG 133516
|| ||| |||||||||||| | || ||||| ||| || || |||| | |||||
Sbjct 1178598 GATTCCCTTGCTCACCGGACAGCCCTCGTACGTTTCGTACGGACCGTCGCGGGCGGCCAA 1178539
Query 133517 CTCGCAGCTAGCCTCCAAAGCGGCAAAGTAAATGGTTTCCGCGATTGAATAGTTGACGAA 133576
||| ||||||||||||| |||| || |||| ||||| || ||| | ||| | |
Sbjct 1178538 CTCACAGCTAGCCTCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCA-GCT 1178480
Query 133577 CCTG-GCATCGTCGCTATCGTAGGCGATGTCG-AGAAGAACAAACGCGTCGGCCAAACCC 133634
|| || || || || ||||| | |||| || | |||| ||||| ||||||| |||
Sbjct 1178479 TTTGTGCTTCCTCACTTTCGTACG-GATGGCGCATGAGAATGAACGCATCGGCCATTCCC 1178421
Query 133635 TGTATGCCGACGCCGATGGGTCGATGTTTTTTATTGCTCCTCTCCGACTCGGCCGTGGGA 133694
|| | ||||| ||||| ||||| || | ||| | || || ||| | | ||
Sbjct 1178420 TGCACGCCGATACCGATAGGTCGGTGGCGCATGTTGGAACGCTTCGCCTCCGGCACCGGG 1178361
Query 133695 TAGTGGTTGACGTCGATGATCTTGTTGAGATTGCGGACGATAATTTTAGTCAAATGTTTC 133754
|||| ||||| ||||||||| ||||| || ||||| || || || | | | |||
Sbjct 1178360 TAGTAGTTGATGTCGATGATTTTGTTCAGGTTGCGCGTGACGATCTTGGCGACCTCCTTC 1178301
Query 133755 AGCAAAACATAGTCAAATGTCTTGGCG--TCGACGTCGACGCACTTGTTGACGGCAATAC 133812
||| || |||| | || ||| || | || || || |||| | |||||
Sbjct 1178300 AGCTTCACGAAGTCGTACGT----GCGATCCGGCCTC-ACAAACATGTTCAGCGCAATCG 1178246
Query 133813 TGGCTAGATTACAAACGGCCGTCTCGTTC-TCGTCGCAATACTGGACGATCTCGGCGCAG 133871
|| ||||| || || || | |||| | ||| || | |||| ||||||||| | |||
Sbjct 1178245 ACGCCAGATTGCACACCGCAATTTCGTCCTTCGACG-AGTACTCGACGATCTCCGTGCAC 1178187
Query 133872 AGGTTGCTGCATTTGATGGTGCCCAAAtttttttGATTGCTAAAGTTATTGCAATGATCC 133931
||||| ||| ||||| ||||||| || | || ||||| ||||| ||||
Sbjct 1178186 AGGTTCGAGCACTTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCC 1178127
Query 133932 TTGTATAGCATGTACGGCCCGCCGGTTTCGACGTTGGTCTCGACGATAAATCTAA--ACA 133989
||||| |||||||||||| |||| || ||||| | | ||||| ||| | || |||
Sbjct 1178126 TTGTAGAGCATGTACGGCACGCCCGTCTCGACCTGCGACTCGATGAT--CGCGAACCACA 1178069
Query 133990 AGTCTCTCGCCTTCACCTGCC 134010
|| ||||||||||||||
Sbjct 1178068 GATCCTGCGCCTTCACCTGCC 1178048
>seq9325
Length=2359367
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|||||||| | | | |||||||| | || || || || || |||||||| ||| |
Sbjct 261130 CCTCCGCGAAGACGAAGAACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAC 261071
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||| || ||||| ||||| ||||||||| |||| | |||||||||||| || ||
Sbjct 261070 AGAGTACGTCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGA 261011
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| ||||||||||| || || || || | |||| |||||||| |||||||
Sbjct 261010 ATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAAGGCTCGACC 260951
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| || | || ||||| ||||| || || || |||||||||||
Sbjct 260950 TCGAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAAATCTGCAT 260904
>seq9240
Length=943838
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||||| |||| || ||||| || ||||||||||| ||| || ||||| |||
Sbjct 630371 CAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGTCCATC 630430
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||| ||||| || || ||| |||| ||||||||||| || || || ||||||||||||||
Sbjct 630431 CTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTC 630490
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
|| || || || | |||| || |||| | ||||||||| | ||| | ||
Sbjct 630491 CTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGT 630550
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || ||||| || || ||||||||
Sbjct 630551 CTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 630583
>seq8899
Length=3132144
Score = 116 bits (128), Expect = 3e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | || || |||| ||| | || ||||| || ||||||||||| ||
Sbjct 384451 TACCACCACGAAGTCGCAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCG 384510
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| || || |||||| ||||| || || ||| |||| |||||||| ||||| || |
Sbjct 384511 AAAGCGTACGGCCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGTTGATCTGGCG 384570
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || ||||| || |||||| || || | |||| ||||||| |||||
Sbjct 384571 GAATTCCTTCCTTATCCTGAATTTTCGCCTTCACATTCTCGATCGTGTCCGACGGCTCGA 384630
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | ||| | || ||||| || || ||||| || |||||||||||
Sbjct 384631 CCTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACGAAAATCTGCAT 384679
>seq8738
Length=1280009
Score = 111 bits (122), Expect = 1e-19
Identities = 162/227 (71%), Gaps = 3/227 (1%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| |||| |||||||| || || ||||||||||| | ||| || ||| ||
Sbjct 1177453 ACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGAAAGAGTACGGCCATCTTCC 1177512
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || || ||||||||||||||||||| ||||| || ||||||||||| |
Sbjct 1177513 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGA 1177572
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | || | ||||||| ||| ||||| | || | || ||
Sbjct 1177573 ATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCTCCACCTCCAACGTGATGGTCTTT 1177632
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATGGCTT-ATTCTATTACTC 118755
|| || || || || || ||||||||||| ||| ||||| ||| ||
Sbjct 1177633 CCCGTAAGGGTCTTGACGAAAATCTGCAT--CTTGATTCTGTTAATC 1177677
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| |||| |||||||| || || ||||||||||| | || || ||| ||
Sbjct 1177225 ACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGAAAGGGTACGGCCATCTTCC 1177284
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || || ||||||||||||||||||| ||||| || ||||||||||| |
Sbjct 1177285 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGA 1177344
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | || | ||||||| ||| ||||| | || | || ||
Sbjct 1177345 ATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCTCAACCTCCAACGTGATGGTCTTT 1177404
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| ||||| || || || ||||| |||||
Sbjct 1177405 CCAGTCAGGGTCTTGACGAAAATTTGCAT 1177433
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| || || || | | || |||||||| ||| || | ||| ||| ||
Sbjct 1179136 ACCAAGTGCATCGTTGATCCGTGCTGGATGTTGTAGTCGGAAATGATCCGCCCATCTTCA 1179195
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| ||||| ||| |||||| ||||||||| || || | ||| ||||| |||
Sbjct 1179196 AGCTGCTTTCCCGCGAAGATGATACGCTGCTGGTCCGGTGCTATACCCTCTCGCTCTTCG 1179255
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
||||| ||| | | ||| || || | | | |||| || | || | ||| |||
Sbjct 1179256 ATTTTGCTTTTTATATCCAAGACCGTCTCGGAGGCCACGACGTCTAGCGTGATCGTCTTG 1179315
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||||| || || |||||||| |||||
Sbjct 1179316 CCGGTCAGTGTCTTCACAAAAATTTGCAT 1179344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433779684141664
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