Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq9240 127 1e-24
seq9325 100 2e-16
seq8899 100 2e-16
>seq9240
Length=943838
Score = 127 bits (140), Expect = 1e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || || | ||||||||| || | || || ||||| |||||||||||||||
Sbjct 630357 CCACCACGGAGGCGCAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 630416
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281
||| || | || |||| ||||||||| ||||| || || |||||||||| || ||||
Sbjct 630417 AGCGTGCGTCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGG 630476
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || ||||||||| ||||| ||| | || | |||| ||| | | |||||
Sbjct 630477 -ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGAC 630535
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | || ||||| || || ||||| ||||| || ||||||||||||
Sbjct 630536 CTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATC 630584
>seq9325
Length=2359367
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| ||||| || | || |||| ||| | || ||| ||||| ||||||||||||||
Sbjct 261131 TCCTCCGCGAAGACGAAGAACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGA 261072
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
||| ||| |||| |||| |||||| || ||||| || | |||||||| || |||
Sbjct 261071 CAGAGTACGTCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGG 261012
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| | ||||||||| ||||| ||| | | | || | || | | |||||
Sbjct 261011 AATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAAGGCTCGAC 260952
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | |||||||| ||||| || || || ||||| || ||||||||
Sbjct 260951 CTCGAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAAATCTGCAT 260904
>seq8899
Length=3132144
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || || | ||| |||||||| | || || ||||| ||||||||||| ||
Sbjct 384453 CCACCACGAAGTCGCAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAA 384512
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
||| |||| | || |||| |||||| || ||||| || || ||||| || || ||
Sbjct 384513 AGCGTACGGCCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGTTGATCTGGCGGA 384572
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||| || || || ||| | || | |||| || | || |||||
Sbjct 384573 ATTCCTTCCTTATCCTGAATTTTCGCCTTCACATTCTCGATCGTGTCCGACGGCTCGACC 384632
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | |||||||| ||||| ||||| |||||||| || |||||||||
Sbjct 384633 TCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACGAAAATCTGCATC 384680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323034232075520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |