Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq9207 122 2e-22 >seq9207 Length=1443628 Score = 122 bits (134), Expect = 2e-22 Identities = 428/658 (65%), Gaps = 13/658 (2%) Strand=Plus/Plus Query 248811 TTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGA 248870 ||||| |||| ||| |||| ||||||||||| || || || || || || || | Sbjct 1177324 TTTGG-GTACAATTATTTTGGCTTCAAAACGCTCGAACGGTCCTACCTGCTGAAGATCAA 1177382 Query 248871 TGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAA 248930 ||||||||||| |||||| ||||||||| ||||||| || || ||||||| ||| Sbjct 1177383 GGGCAAGATCGTCGAACGACCGCAGCACATGCTGATGCGCGTTGCCATCGGGATCCACGG 1177442 Query 248931 GGATGACATAGAGAGCGTGC--TCGAGACGTACACCGGAATGAGTGAACGCTGGATGACA 248988 || ||||| || ||| || |||| ||||||| | || || | | || Sbjct 1177443 CGAGGACATCGA-TGCG-GCAATCGAAACGTACAATTTGCTTTCGGAGCGATACTTTACG 1177500 Query 248989 CATGCCACACCGACGCTCTTCAACGCCGGTACCGTCAAC--AATCAGCTGAGCTCGTGCT 249046 || ||| | ||||| | || || ||| || || | || ||| || |||| Sbjct 1177501 CACGCCTCGCCGACCATGTT-TGCGGCGGCCACG-CAGCGGCCCCAACTGTCGTCCTGCT 1177558 Query 249047 TTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACGG 249106 |||| || | ||| |||||| | |||| || ||||| |||||||| || ||| | Sbjct 1177559 TTCTCCTAACGATGTCGGACGACAGTATCGAGGGAATTTACGACACGCTGAAGCAGTGCG 1177618 Query 249107 CGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGG 249166 | ||| || || | ||| || || || ||||| ||| | |||||| ||||||| Sbjct 1177619 CACTGATCTCCAAGTCCGCCGGAGGCATTGGTCTGAACGTGCACTGCATCCGGGCGAAGG 1177678 Query 249167 GTTCGTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCT 249226 || ||||||| || || || || || | || | || || | || || || Sbjct 1177679 GTACGTACATTGCGGGCACGAACGGTATCTCCAACGGGTTGGTTCCGATGCTGCGTGTCT 1177738 Query 249227 TTGAGTCCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCA 249283 | ||| ||| ||| | |||||| ||| | || || ||||||||| Sbjct 1177739 ACAACAACACGGCCCGGTATGTGGACCAGGGCGGCAACAAGCGTCCCGGTGCGTTCGCCA 1177798 Query 249284 TGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACG 249343 | || | || |||||| | |||| | || ||||| || || |||| || |||| | Sbjct 1177799 TCTACCTCGAGCCGTGGCATGGCGATGTGTTTGAGTTTCTCGATCTGAAGAAAAACACTG 1177858 Query 249344 GCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCA 249403 |||| ||| | | ||||||||| | ||||||| |||||||| | || |||||| Sbjct 1177859 GCAAGGAGGAGGTCCGTGCGCGTGACATGTTCTACGCGCTGTGGGTGCCGGATCTGTTCA 1177918 Query 249404 TGCGCCGCGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGAC-GCCCCGG 249460 || || || |||| ||| |||| ||| | | |||| |||| ||||||| Sbjct 1177919 TGAAGCGGGTGGAGGCGAACGAAATGTGGAGCCTTATGTGTCCGCACGACTGCCCCGG 1177976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073634436793856