Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq9325 120 2e-22 seq9240 105 5e-18 seq8899 95.1 1e-14 seq8738 87.8 1e-12 >seq9325 Length=2359367 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || |||||||| |||||||||||| ||| || |||| ||| Sbjct 261112 ACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCC 261053 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||| ||||| ||||| ||||| || || || || | ||||||||||||| Sbjct 261052 AGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGG 260993 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | ||||| | ||| ||||| | || || |||||| Sbjct 260992 ATCTTAGCCTTGACGTTCTCGATGGTGTCCGAAGGCTCGACCTCGAGAGTGATGGTCTTG 260933 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| |||||||| || || ||||| Sbjct 260932 CCAGTCAGCGTCTTCACGAAAATCTGCAT 260904 >seq9240 Length=943838 Score = 105 bits (116), Expect = 5e-18 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||||||||||||||||||| ||| ||| | || ||||| || || |||||||| Sbjct 630392 CTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGTCCATCCTCCAGCTGCTTGCCGGCGAA 630451 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 |||| ||||| ||||| || || | |||||||||||| || || ||| || Sbjct 630452 GATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 630511 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | | ||| ||| ||||| | |||||| ||||| ||||| || || || || Sbjct 630512 CTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGAC 630571 Query 45325 AAAGATTTGCATGTTG 45340 ||||| ||||| ||| Sbjct 630572 GAAGATCTGCATCTTG 630587 >seq8899 Length=3132144 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || || ||||||||||||||||||||| || || | || ||| Sbjct 384471 ACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAAAGCGTACGGCCATCCTCC 384530 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| |||||||| || || || | || ||||| ||| | Sbjct 384531 AGCTGCTTACCGGCGAAGATCAGACGCTGTTGATCTGGCGGAATTCCTTCCTTATCCTGA 384590 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| ||| || | | | ||||| ||| ||||| | ||| || |||||| Sbjct 384591 ATTTTCGCCTTCACATTCTCGATCGTGTCCGACGGCTCGACCTCAAGGGTGATGGTCTTG 384650 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 || || || || ||||| || || ||||| || Sbjct 384651 CCAGTGAGGGTTTTCACGAAAATCTGCATCTT 384682 >seq8738 Length=1280009 Score = 87.8 bits (96), Expect = 1e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| |||||||| || || || | || ||||| || || ||||| || Sbjct 1177470 CTCCTTCTGGATGTTGTAATCCGAAAGAGTACGGCCATCTTCCAGCTGCTTGCCGGCAAA 1177529 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | ||||| || || ||||| | |||||||||||| ||| || ||| || Sbjct 1177530 GATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATT 1177589 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | ||||| | ||||||||||| || || ||||| ||||| || ||||| || Sbjct 1177590 CTCAATCGTGTCCGAAGGCTCCACCTCCAACGTGATGGTCTTTCCCGTAAGGGTCTTGAC 1177649 Query 45325 AAAGATTTGCATGTTG 45340 || || ||||| ||| Sbjct 1177650 GAAAATCTGCATCTTG 1177665 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| |||||||| || || || | || ||||| || || ||||| || Sbjct 1177242 CTCCTTCTGGATGTTGTAATCCGAAAGGGTACGGCCATCTTCCAGCTGCTTGCCGGCAAA 1177301 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | ||||| || || ||||| | |||||||||||| ||| || ||| || Sbjct 1177302 GATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATT 1177361 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | ||||| | ||| ||||||| || || ||||| || ||||| ||||| || Sbjct 1177362 CTCAATCGTGTCCGAAGGCTCAACCTCCAACGTGATGGTCTTTCCAGTCAGGGTCTTGAC 1177421 Query 45325 AAAGATTTGCAT 45336 || |||||||| Sbjct 1177422 GAAAATTTGCAT 1177433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395029014721432