Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 942 0.0
seq9254 183 3e-41
seq9240 104 2e-17
seq8738 100 3e-16
>seq9207
Length=1443628
Score = 942 bits (1044), Expect = 0.0
Identities = 1367/1931 (71%), Gaps = 15/1931 (1%)
Strand=Plus/Minus
Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165
|||||||| |||||||| || ||||| ||||||| |||||||| ||||| |||||||||
Sbjct 1179164 TTGTCCACCGTAAACTGGATCGCGTTCACGGCCGGCTTGGTGCGCAGATAGTACATGCCC 1179105
Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGC 22225
|||||||| ||||||||||| |||| || || |||||||||| || || || ||||
Sbjct 1179104 GTCTTCAGGCCCATCTTCCAGCCGTAGAAGTGAATCGACGTCAGCTTGCCGTAGTTCGGT 1179045
Query 22226 AAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCC 22285
| ||| || | ||||||||||| ||||||||| ||||| || || || ||||||
Sbjct 1179044 TCGGCCACGTGAATGTTGAACGACTGGGACTGATCGATGAACGCACCCCGGTCCGCGGCC 1178985
Query 22286 ATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCT 22345
|| || || | || || ||| || ||||| || ||||||||||| | | ||| |
Sbjct 1178984 ATTTTGATGCACGTTTTCACCGATATCTCCCACACCGTCTTGTACAGGTCGCGGATGTGC 1178925
Query 22346 AACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATC 22405
||| || ||||||| ||| | || ||||| | | ||| || || ||
Sbjct 1178924 TGCGGAATTTCCTCGATCCGCTGTATCGAACCGTTGTGCGCAAGGATTTGGTTCTTCATA 1178865
Query 22406 GTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGA 22465
|| | ||||| |||| |||||| ||| | | |||||| |||| ||||| ||
Sbjct 1178864 TCGTCATCCCACAGGCCGAGTTCGGTCAGATCCTGCAGCAGATGGTGGTTGACCACCTGG 1178805
Query 22466 AACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCA 22525
|||||||| |||| ||||| || | ||| | ||| || ||| |||| ||||| || ||
Sbjct 1178804 AACTCGCCCGACAGCACGCGCCGATTGTAGACGTTCGAAGTGTACGGCTCGAACGACTCG 1178745
Query 22526 TTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTT 22585
||||| ||||| || || || || || |||||||||||||| |||| ||| ||||| ||
Sbjct 1178744 TTGTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGCATCGGTGCCAGCAGGAGCGAATTC 1178685
Query 22586 CTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGGC 22645
| | || ||||| | ||| || ||| ||| | ||||| |||||| || | ||
Sbjct 1178684 CGGATACCATGCTTGGCAATCTTTTCCTTCAGCTCGGCCCAGTTCCACAGGTCCGTTGGG 1178625
Query 22646 GTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCGTAC 22705
||| || |||||||| ||||| |||| | || ||| |||| | ||| ||||||
Sbjct 1178624 GTC---TTCTCCCACATGTCGTACTGCAGGATTCCCTTGCTCACCGGACAGCCCTCGTAC 1178568
Query 22706 GTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATAT 22765
|||||||||||||| | ||||| | || ||||| ||||||| ||||| || ||
Sbjct 1178567 GTTTCGTACGGACCGTCGCGGGCGGCCAACTCACAGCTAGCCTCCAGAGCGCCATAGTAG 1178508
Query 22766 ATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCATACGC 22825
|| ||||| ||||| | || ||||| | || | | ||||||||||| |||
Sbjct 1178507 ATGGTCTCAAAGATCTGCTGGTTCAGCTTTTGTGCTTCCTCACTTTCGTACGGATGGCGC 1178448
Query 22826 ATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGA 22885
|| | | |||||| || ||||| ||||| ||||| |||||||| ||||||| ||
Sbjct 1178447 ATGAGAATGAACGCATCGGCCATTCCCTGCACGCCGATACCGATAGGTCGGTGGCGCATG 1178388
Query 22886 TTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTT 22945
|| || || ||||| |||| || || | || ||||| || |||||| |||
Sbjct 1178387 TTGGAACGCTTCGCCTCCGGCACCGGGTAGTAGTTGATGTCGATGATTTTGTTCAGGTTG 1178328
Query 22946 CTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGATTGTACA 23005
| || || || || | | | |||||||| || |||| |
Sbjct 1178327 CGCGTGACGATCTTGGCGACCTCCTTCAGCTTCACGAAGTCGTA--CGTGCGATCCGGCC 1178270
Query 23006 --ACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACG 23063
|||||| |||| | || ||||| || |||||||| || || | ||||| || ||||
Sbjct 1178269 TCACAAACATGTTCAGCGCAATCGACGCCAGATTGCACACCGCAATTTCGTCCTTCGACG 1178210
Query 23064 TGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGT 23123
|||||| || || || || || || || ||||| |||||||||| || |||||
Sbjct 1178209 AGTACTCGACGATCTCCGTGCACAGGTTCGAGCACTTGATCGTGCCCACGTTCTGCTGGT 1178150
Query 23124 TGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCG 23183
|||| || || ||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct 1178149 TGCTCTTCCGGTTGCACGCATCCTTGTAGAGCATGTACGGCACGCCCGTCTCGACCTGCG 1178090
Query 23184 ACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCTGCCTTCTT 23243
||||||||||||| ||||| | ||| || | || | || | | ||| ||||| |
Sbjct 1178089 ACTCGATGATCGCGAACCACAGATCCTGCGCCTTCACCTGCCGGATGAACCGACCTTCCT 1178030
Query 23244 CCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCG 23303
|||||| ||||| | ||||| || | || | | || | ||| |||||
Sbjct 1178029 TCTCGTAGCCCGTGTACAGCCGCTCAAACTCTTCGCCCCACGACTCCGACAGCCCGGGGC 1177970
Query 23304 ATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGAT 23363
| | ||||||||| || ||||||||| || || || || |||| || ||||
Sbjct 1177969 AGTCGTGCGGACACATAAGGCTCCACATTTCGTTCGCCTCCACCCGCTTCATGAACAGAT 1177910
Query 23364 CCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCT 23423
|||| | ||| || |||||||||| || || || || |||||||| ||||| ||||| |
Sbjct 1177909 CCGGCACCCACAGCGCGTAGAACATGTCACGCGCACGGACCTCCTCCTTGCCAGTGTTTT 1177850
Query 23424 TTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACG 23483
| |||| ||| | ||| || ||||| || ||||||||||||||||||| | ||| ||||
Sbjct 1177849 TCTTCAGATCGAGAAACTCAAACACATCGCCATGCCACGGCTCGAGGTAGATGGCGAACG 1177790
Query 23484 CGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTA 23543
| || || | ||| ||||||||||| || || || ||||||||||||||||| || | |
Sbjct 1177789 CACCGGGACGCTTGTTGCCGCCCTGGTCCACATACCGGGCCGTGTTGTTGTAGACACGCA 1177730
Query 23544 GCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTC 23603
||||||| || | |||||||| ||| |||||| | || ||| || || |
Sbjct 1177729 GCATCGGAACCAACCCGTTGGAGATACCGTTCGTGCCCGCAATGTACGTACCCTTCGCCC 1177670
Query 23604 GAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTT 23663
| | | ||| |||| | ||| ||||||||| | || || || |||| ||||| || |
Sbjct 1177669 GGATGCAGTGCACGTTCAGACCAATGCCTCCGGCGGACTTGGAGATCAGTGCGCACTGCT 1177610
Query 23664 TCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAG 23723
|||| |||||||| || |||||||| ||||| || ||| | | || || || |
Sbjct 1177609 TCAGCGTGTCGTAAATTCCCTCGATACTGTCGTCCGACATCGTTAGGAGAAAGCAGGACG 1177550
Query 23724 ACATTTG----CGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAG 23779
||| ||| |||| |||| || |||| |||| ||||| |||||||||||||
Sbjct 1177549 ACAGTTGGGGCCGCT----GCGTGGCCGCCGCAAACATGGTCGGCGAGGCGTGCGTAAAG 1177494
Query 23780 TATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATA 23839
|||| | ||| | | ||||||||| ||||| || ||||| |||||||| ||||| ||
Sbjct 1177493 TATCGCTCCGAAAGCAAATTGTACGTTTCGATTGCCGCATCGATGTCCTCGCCGTGGATC 1177434
Query 23840 CCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTG 23899
|||||||| |||||||||| ||||| || |||| ||||| | ||| || || ||
Sbjct 1177433 CCGATGGCAACGCGCATCAGCATGTGCTGCGGTCGTTCGACGATCTTGCCCTTGATCTTC 1177374
Query 23900 AACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCG 23959
| ||| || || |||| | |||||| || |||||||| | || |||||| ||||||
Sbjct 1177373 AGCAGGTAGGACCGTTCGAGCGTTTTGAAGCCAAAATAATTGTACCCAAAGTCGCGATCG 1177314
Query 23960 TGCACTATGGCCGAATTCAAACGGTACGCATTGGCAGCGATGATGTTGTAATGAAAATTC 24019
| | |||||||| |||| |||| ||| ||||| |||||| ||||| || | | |
Sbjct 1177313 TAGATGATGGCCGAGTTCAGCCGGTCCGCGTTGGCCATGATGATTTTGTAGTGCATTTCC 1177254
Query 24020 GATATCATCGG 24030
|| | ||| ||
Sbjct 1177253 GAAAGCATGGG 1177243
>seq9254
Length=4138565
Score = 183 bits (202), Expect = 3e-41
Identities = 298/427 (70%), Gaps = 4/427 (1%)
Strand=Plus/Minus
Query 57879 CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAA 57938
|||||||| || |||||||| | || | |||||||| || ||| || | ||
Sbjct 2197472 CTGTTCAATGCCATCGAAACGCTACCGTGTGTGAAGAAGAAGGCTGACTGGGCACTGAAC 2197413
Query 57939 TGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAA 57998
||||| ||| | |||| |||| |||| | | ||||||| |||||||||||
Sbjct 2197412 TGGATTTCGAGCAAGAAAGCCAACTTCGGCGAGCGTGTTGTCGCGTTTGCCGCCGTCGAG 2197353
Query 57999 GGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATG 58058
|| || ||||| ||||||||||| || || || ||| | ||||| || || ||||||
Sbjct 2197352 GGAATTTTCTTCAGCGGCAGCTTTGCCGCTATCTTCTGGCTTAAGAAGCGAGGACTGATG 2197293
Query 58059 CCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTT 58118
|| ||| |||| || |||||| |||| ||||| |||||||| | || ||| |||
Sbjct 2197292 CCAGGCTTGACCTTCTCGAACGAGCTGATTTCGCGTGACGAGGGCTTGCACTGTGACTTT 2197233
Query 58119 GCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCAT--CTTGGACA 58176
|| ||||| |||| | || | || | || |||||||| || || | || | ||
Sbjct 2197232 GCTTGCCTTATGTTCAAATACCTGGTTCAAAAGCCGACGCGCGAGCGTGTGACTAG--CA 2197175
Query 58177 TTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCA 58236
| || ||| ||||| | |||||| | ||||| | ||| | || || || || | |
Sbjct 2197174 TCATTCGCGATGCGGTGGTAATCGAACAGGAGTTCCTTACCAAGGCGCTGCCAGTCGATA 2197115
Query 58237 TGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTT 58296
|||| || |||||| ||| ||||||| ||||||| ||||| ||||||||| | ||
Sbjct 2197114 TGCTGGGCATGAACTGTGACCTGATGTCGCAGTACATCGAGTTCGTTGCCGACCGGCTGC 2197055
Query 58297 TGCTCGA 58303
|| ||||
Sbjct 2197054 TGGTCGA 2197048
Score = 138 bits (152), Expect = 1e-27
Identities = 191/267 (72%), Gaps = 8/267 (3%)
Strand=Plus/Minus
Query 57589 AGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATT 57648
|||| || ||||| || ||||| || || || |||||||| || ||||| ||| || |
Sbjct 2197841 AGGCCGAGGCATCTTTCTGGACGGTAGAGGAGGTAGACCTCTCGAAGGACATGAAGGACT 2197782
Query 57649 GGGATTCCCTCAAAGAATCTGAGAGAA----ATTTTATTAAACACGTGTTGGCGTTTTTC 57704
|||| || | ||| | ||| ||| | || || |||||| | || || |||
Sbjct 2197781 GGGAGTCGTTGAAA----CCGAGCGAACGTCACTTCATCTCGCACGTGCTCGCTTTCTTC 2197726
Query 57705 GCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAA 57764
|||||||| || || || || ||||||||| |||||||| |||| || ||||||||
Sbjct 2197725 GCCGCATCGGACGGAATCGTCAACGAGAATCTGGTCGAACGATTCAGCCAGGAAGTGCAG 2197666
Query 57765 GTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAA 57824
||||| || ||| | ||||| || || || || | || || |||||||| || ||
Sbjct 2197665 GTGACCGAAGCGCGCTGCTTCTATGGTTTCCAGATCGCGATGGAAAACGTCCACAGCGAG 2197606
Query 57825 ATGTATTCGCTACTCATCGATACGTAC 57851
||||| || || || ||||| ||||||
Sbjct 2197605 ATGTACTCCCTGCTGATCGACACGTAC 2197579
>seq9240
Length=943838
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| || ||||| || || || || || || || || ||| | || || || ||
Sbjct 630586 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 630527
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | |||| | || || || || ||||||||| ||| | ||||| |||
Sbjct 630526 TCGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGAC 630467
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368
||||||||||| || ||||| ||||| ||| |||| || | | | || || ||| ||
Sbjct 630466 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGA-TGGACGCACGCTGTCCGACTA 630408
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|||||||| || || ||||| || |||||||| ||
Sbjct 630407 CAACATTCAGAAGGAGTCGACCCTCCATCTGGTGCT 630372
>seq8738
Length=1280009
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| ||||| ||||| || || || ||||| | || ||||| || ||
Sbjct 1177433 ATGCAAATTTTCGTCAAGACCCTGACTGGAAAGACCATCACGTTGGAGGTTGAGCCTTCG 1177374
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | || || | || ||||||||| || | || || || |||
Sbjct 1177373 GACACGATTGAGAATGTGAAGGCCAAGATTCAGGACAAGGAGGGAATCCCTCCAGATCAG 1177314
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || || || ||||| ||| ||||||| || | ||||| |||
Sbjct 1177313 CAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGTACCCTTTCGGATTACAAC 1177254
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|| || || || || ||||| |||||||| ||| | ||| | || |||
Sbjct 1177253 ATCCAGAAGGAGTCTACTCTCCATCTGGTCCTTCGTCTGCGCGGTGGT 1177206
Score = 93.3 bits (102), Expect = 4e-14
Identities = 163/236 (69%), Gaps = 1/236 (0%)
Strand=Plus/Minus
Query 31184 GAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTT 31243
||||||| ||||| |||||||| ||||| || || || || || ||||| | || ||
Sbjct 1177669 GAATCAAG-ATGCAGATTTTCGTCAAGACCCTTACGGGAAAGACCATCACGTTGGAGGTG 1177611
Query 31244 GAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCG 31303
|| || || |||| | || | || || | || ||||||||| || | ||
Sbjct 1177610 GAGCCTTCGGACACGATTGAGAATGTGAAGGCCAAGATTCAGGACAAGGAGGGAATCCCT 1177551
Query 31304 CCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC 31363
|| || ||||||||||| || || || ||||| ||| ||||||| ||| |
Sbjct 1177550 CCAGATCAGCAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGTACTCTTTCG 1177491
Query 31364 GATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||||| ||||| || || || || ||||| |||||||| ||| | ||| | || ||
Sbjct 1177490 GATTACAACATCCAGAAGGAGTCTACTCTCCATCTGGTCCTTCGTCTGCGCGGTGG 1177435
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445712952608640
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