Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq9041 100 6e-16
>seq9041
Length=338010
Score = 100 bits (110), Expect = 6e-16
Identities = 210/308 (68%), Gaps = 4/308 (1%)
Strand=Plus/Plus
Query 35420 TTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTCTTCCGATTATACTGGAAAG 35479
|| |||||||| || |||||||| |||| || ||| ||||||| ||| ||
Sbjct 58659 TTTCAATGGCGACACTTTGGTGCGAGCTATGGAACATGTCACGATGATTATAATGGTAAA 58718
Query 35480 GGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAGAA-AATCCAGATGATAGAAG 35538
||||||||||| |||| | || | | | | | |||| ||||| | ||| | |
Sbjct 58719 GGTATTGATCAGCTGGCTGAAGTAATCGACAAGATAA-AGAACAATCCTTACGATCGTCG 58777
Query 35539 GATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCA 35598
|| || |||| ||||||||||| || || ||| ||||| || || || |||||
Sbjct 58778 AATCATCATGAGCGCATGGAATCCAATCGACATTCCGAACATGGCACTACCCCCTTGCCA 58837
Query 35599 CATGACT-GCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCAGTTGTATCAGCGAA 35657
|| | || |||||||| || || |||| ||| |||| |||||| ||||||| ||
Sbjct 58838 -TTGTTTGGCCCAATTTTACGTAGCAGATGGGGAACTGTCCTGCCAGATGTATCAACGGT 58896
Query 35658 GCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACTCTCTTCTGACTCATC 35717
| || || || | || || ||||||||||||||| ||||| | || || ||
Sbjct 58897 CGGCCGACGTAGGACTAGGAGTACCCTTCAATATTGCAAGCTACTCCTTGCTCACACACA 58956
Query 35718 TGATGGCC 35725
|||| |||
Sbjct 58957 TGATTGCC 58964
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989462382600360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |