Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq9041 100 6e-16 >seq9041 Length=338010 Score = 100 bits (110), Expect = 6e-16 Identities = 210/308 (68%), Gaps = 4/308 (1%) Strand=Plus/Plus Query 35420 TTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTCTTCCGATTATACTGGAAAG 35479 || |||||||| || |||||||| |||| || ||| ||||||| ||| || Sbjct 58659 TTTCAATGGCGACACTTTGGTGCGAGCTATGGAACATGTCACGATGATTATAATGGTAAA 58718 Query 35480 GGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAGAA-AATCCAGATGATAGAAG 35538 ||||||||||| |||| | || | | | | | |||| ||||| | ||| | | Sbjct 58719 GGTATTGATCAGCTGGCTGAAGTAATCGACAAGATAA-AGAACAATCCTTACGATCGTCG 58777 Query 35539 GATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCA 35598 || || |||| ||||||||||| || || ||| ||||| || || || ||||| Sbjct 58778 AATCATCATGAGCGCATGGAATCCAATCGACATTCCGAACATGGCACTACCCCCTTGCCA 58837 Query 35599 CATGACT-GCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCAGTTGTATCAGCGAA 35657 || | || |||||||| || || |||| ||| |||| |||||| ||||||| || Sbjct 58838 -TTGTTTGGCCCAATTTTACGTAGCAGATGGGGAACTGTCCTGCCAGATGTATCAACGGT 58896 Query 35658 GCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACTCTCTTCTGACTCATC 35717 | || || || | || || ||||||||||||||| ||||| | || || || Sbjct 58897 CGGCCGACGTAGGACTAGGAGTACCCTTCAATATTGCAAGCTACTCCTTGCTCACACACA 58956 Query 35718 TGATGGCC 35725 |||| ||| Sbjct 58957 TGATTGCC 58964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989462382600360