Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 259 6e-64
>seq9207
Length=1443628
Score = 259 bits (286), Expect = 6e-64
Identities = 996/1555 (64%), Gaps = 41/1555 (3%)
Strand=Plus/Minus
Query 62370 AGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTA 62429
|| ||||| |||| || || ||||| || || |||| || | |||| |||| | ||
Sbjct 1178828 AGCAGATGGTGGTTGACCACCTGGAACTCGCCCGACAGCACGCGCCGATTGTAGACGTTC 1178769
Query 62430 CTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGC 62489
|| ||||| || | |||||| || || |||| |||||| || || || || ||||||
Sbjct 1178768 GAAGTGTACGGCTCGAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGC 1178709
Query 62490 ATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAT 62547
|| ||||||| || | ||| | | ||| ||| | | || || || || || |
Sbjct 1178708 ATCGGTGCCAGCAGGAGCGAATTCCGGATACC--ATGCTTGGCAATCTTTTCCTTCAGCT 1178651
Query 62548 GTTCCCAATTCCAAAGATCCGACGG-------TACAACANNNNNNNNNNNATATTGTAGA 62600
|||| ||||| || |||| || | | ||| || || ||
Sbjct 1178650 CGGCCCAGTTCCACAGGTCCGTTGGGGTCTTCTCCCACATGTCG-------TACTGCAGG 1178598
Query 62601 ATACCGTTACTGGC-GTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAG 62659
|| || || || | | || ||| | || || || || || || || | || |
Sbjct 1178597 ATTCCCTTGCTCACCGGACAGCCCT-CGTACGTTTCGTACGGACCGTCGCGGGCGGCCAA 1178539
Query 62660 TTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATC 62719
| ||| || ||||| | || || || || ||||| |||||||||| || || || |
Sbjct 1178538 CTCACAGCTAGCCTCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCAGCTT 1178479
Query 62720 TTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTG 62779
|||||||||| || || | |||| | |||||| ||||| || || | ||| ||
Sbjct 1178478 TTGTGCTTCCTCACTTTCGTACGGATGGCGCATGAGAATGAACGCATCGGCCATTCCCTG 1178419
Query 62780 AACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATA 62839
|| || ||||||||||||| || | | | || || | || || || | || ||
Sbjct 1178418 CACGCCGATACCGATAGGTCGGTGGCGCATGTTGGAACGCTTCGCCTCCGGCACCGGGTA 1178359
Query 62840 ATAATTAATATCTATAATTTTATTGAGATTTC---TGACAATTACTTTGACCACATCCTT 62896
|| || || || || ||||| || || || | |||| || ||| | || |||||
Sbjct 1178358 GTAGTTGATGTCGATGATTTTGTTCAGGTTGCGCGTGACGATC---TTGGCGACCTCCTT 1178302
Query 62897 CAGTTTGAGAAAATCAAATCGCCCATCTA---TTACAAACATGTTCAATGCAACAGATGC 62953
||| || | || || | | ||| | ||||||||||||| |||| || ||
Sbjct 1178301 CAGCTTCACGAAGTCGTACGTGCGATCCGGCCTCACAAACATGTTCAGCGCAATCGACGC 1178242
Query 62954 CAGATTACACACGGCTACCTCATTAGCATC--CGCATATTGTATTATCTCAGTGCAAAGA 63011
|||||| ||||| || | || | | || || || | | ||||| ||||| ||
Sbjct 1178241 CAGATTGCACACCGCAATTTCGTC--CTTCGACGAGTACTCGACGATCTCCGTGCACAGG 1178184
Query 63012 TTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 63071
|| |||||||| || || | || || || || ||||| ||| |||||||||||
Sbjct 1178183 TTCGAGCACTTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCCTTG 1178124
Query 63072 TAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT 63131
|| || ||| | || || || || | ||| || || || ||||| ||| | |
Sbjct 1178123 TAGAGCATGTACGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAACCACAGATCC 1178064
Query 63132 CGAGCCTTTA--TTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTT 63189
| ||||| | | ||| | | | | ||| | ||||| || |||| || |
Sbjct 1178063 TGCGCCTTCACCTGCCGGAT--GAACCGACCTTCCTTCTCGTAGCCCGTGTACAGCCGCT 1178006
Query 63190 CGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACC 63249
| ||||| || ||||| | || | || || || | ||||||||| | ||
Sbjct 1178005 CAAACTCTTCGCCCCACGACTCCGACAGCCCGGGGCAGTCGTGCGGACACATAAGGCTCC 1177946
Query 63250 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 63309
|| | ||| ||| ||| || ||||| || ||||| || | ||| || || || |
Sbjct 1177945 ACATTTCGTTCGCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAGCGCGTAGAACA 1177886
Query 63310 GATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAA 63369
|| | | | ||||| || || || || || || |||||||| ||| | | |
Sbjct 1177885 TGTCACGCGCACGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGAAACTCAAACA 1177826
Query 63370 TATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCT 63429
||| ||||||||| || | ||| ||||| | | || || || ||||| || ||||
Sbjct 1177825 CATCGCCATGCCACGGCTCGAGGTAGATGGCGAACGCACCGGGACGCTTGTTGCCGCCCT 1177766
Query 63430 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATA 63489
| || | || | || ||||| || || || | || ||| |||| | ||||| || |
Sbjct 1177765 GGTCCACATACCGGGCCGTGTTGTTGTAGACACGCAGCATCGGAACCAACCCGTTGGAGA 1177706
Query 63490 TACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGATAGACC 63547
|||| || || || | || || || | || || || | | | || | ||||
Sbjct 1177705 TACCGTTCGTGCCCGCAATGTACGTACCCTTCGCCCGGATGCAGTGCACGTTCA--GACC 1177648
Query 63548 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTC 63607
|| || || || || ||||| | |||||| | || | |||||| || || || ||
Sbjct 1177647 AATGCCTCCGGCGGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAAATTCCCTC 1177588
Query 63608 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCC 63667
|| || || || ||| | || ||||| ||| |||| |||| | || || |
Sbjct 1177587 GATACTGTCGTCCGACATCGTTAGGAGAAAGCAGGACGACAGTTGGGGCCGCTGCGTGGC 1177528
Query 63668 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 63727
||| ||| | ||| || || ||||||||||| || || ||||| | |||||||||
Sbjct 1177527 CGCCGCAAACATGGTCGGCGAGGCGTGCGTAAAGTATCGCTCCGAAAGCAAATTGTACGT 1177468
Query 63728 CTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTG 63787
|| || || | || || ||| || || || | || || ||||| | ||||||
Sbjct 1177467 TTCGATTGCCGCATCGATGTCCTCGCCGTGGATCCCGATGGCAACGCGCATCAGCATGTG 1177408
Query 63788 CTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 63847
||| |||| ||| || || ||| || || |||| || |||||| ||| | |||||
Sbjct 1177407 CTGCGGTCGTTCGACGATCTTGCCCTTGATCTTCAGCAGGTAGGACCGTTCGAGCGTTTT 1177348
Query 63848 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGC 63902
|| |||||||| ||||| |||||| || ||||| || || |||| || |||
Sbjct 1177347 GAAGCCAAAATAATTGTACCCAAAGTCGCGATCGTAGATGATGGCCGAGTTCAGC 1177293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629742084869760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |