Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 264 1e-65
>seq9207
Length=1443628
Score = 264 bits (292), Expect = 1e-65
Identities = 815/1253 (65%), Gaps = 21/1253 (2%)
Strand=Plus/Minus
Query 65454 TCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCT 65513
||||| || ||||| | || || || || ||||| || ||||||| || || || | |
Sbjct 1178537 TCACAGCTAGCCTCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCAGCTTT 1178478
Query 65514 TGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGA 65573
||||||||| || || | |||| | |||||| ||||| || || | ||| ||
Sbjct 1178477 TGTGCTTCCTCACTTTCGTACGGATGGCGCATGAGAATGAACGCATCGGCCATTCCCTGC 1178418
Query 65574 ACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAA 65633
|| || ||||||||||||| || | | | || || | || || || | || ||
Sbjct 1178417 ACGCCGATACCGATAGGTCGGTGGCGCATGTTGGAACGCTTCGCCTCCGGCACCGGGTAG 1178358
Query 65634 TAATTAATATCTATAATTTTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTC 65690
|| || || || || ||||| || || || | |||| || ||| | || ||||||
Sbjct 1178357 TAGTTGATGTCGATGATTTTGTTCAGGTTGCGCGTGACGATC---TTGGCGACCTCCTTC 1178301
Query 65691 AGTTTGAGAAAATCAAAT---CGCTCATCTATTACAAACATGTTCAATGCAACAGATGCC 65747
|| || | || || | || || | ||||||||||||| |||| || |||
Sbjct 1178300 AGCTTCACGAAGTCGTACGTGCGATCCGGCCTCACAAACATGTTCAGCGCAATCGACGCC 1178241
Query 65748 AGATTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATCTCAGTGCAAAGAT 65805
||||| || || || | || | | || || || | | ||||| ||||| || |
Sbjct 1178240 AGATTGCACACCGCAATTTCGTC--CTTCGACGAGTACTCGACGATCTCCGTGCACAGGT 1178183
Query 65806 TACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 65865
| |||||||| || || | || || || || ||||| ||| ||||||||||| |
Sbjct 1178182 TCGAGCACTTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCCTTGT 1178123
Query 65866 AAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC 65925
| || ||| | || || || || | ||| || || || ||||| ||| | |
Sbjct 1178122 AGAGCATGTACGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAACCACAGATCCT 1178063
Query 65926 GAGCCTTTA--TTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTC 65983
| ||||| | | ||| | | | ||| | ||||| || |||| || ||
Sbjct 1178062 GCGCCTTCACCTGCCGGAT--GAACCGACCTTCCTTCTCGTAGCCCGTGTACAGCCGCTC 1178005
Query 65984 GAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCA 66043
||||| || ||||| | || || || || || | ||||||||| | |||
Sbjct 1178004 AAACTCTTCGCCCCACGACTCCGACAGCCCGGGGCAGTCGTGCGGACACATAAGGCTCCA 1177945
Query 66044 CTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAA 66103
| | ||| ||| ||| || ||||| || ||||| || | ||| || || || |
Sbjct 1177944 CATTTCGTTCGCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAGCGCGTAGAACAT 1177885
Query 66104 ATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 66163
|| | | | ||||| || || || || || || |||||||| ||| | | |
Sbjct 1177884 GTCACGCGCACGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGAAACTCAAACAC 1177825
Query 66164 ATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTG 66223
||| ||||||||| || | ||| ||||| | | || || || ||||| || |||||
Sbjct 1177824 ATCGCCATGCCACGGCTCGAGGTAGATGGCGAACGCACCGGGACGCTTGTTGCCGCCCTG 1177765
Query 66224 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGT 66283
|| | || | || ||||| || || || | || ||| |||| | || ||||| |
Sbjct 1177764 GTCCACATACCGGGCCGTGTTGTTGTAGACACGCAGCATCGGAACCAACCCGTTGGAGAT 1177705
Query 66284 ACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAATTGATAGACCT 66341
||| || || || | || || | || | || || || | | | || | ||||
Sbjct 1177704 ACCGTTCGTGCCCGCAATGTACGTACCCTTCGCCCGGATGCAGTGCACGTTCA--GACCA 1177647
Query 66342 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 66401
|| || || || || ||||| | |||||| | || | ||| || || || |||||
Sbjct 1177646 ATGCCTCCGGCGGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAAATTCCCTCG 1177587
Query 66402 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 66461
||||| || ||| ||| | || ||||| ||| |||| |||| | || || ||
Sbjct 1177586 ATACTGTCGTCCGACATCGTTAGGAGAAAGCAGGACGACAGTTGGGGCCGCTGCGTGGCC 1177527
Query 66462 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 66521
|| ||| | ||| || || ||||||||||| || || ||||| | |||||||||
Sbjct 1177526 GCCGCAAACATGGTCGGCGAGGCGTGCGTAAAGTATCGCTCCGAAAGCAAATTGTACGTT 1177467
Query 66522 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 66581
|| || || | || || ||| || || || | || || ||||| | |||||||
Sbjct 1177466 TCGATTGCCGCATCGATGTCCTCGCCGTGGATCCCGATGGCAACGCGCATCAGCATGTGC 1177407
Query 66582 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 66641
|| |||| ||| ||||||||| || || |||| || |||||| ||| | |||||
Sbjct 1177406 TGCGGTCGTTCGACGATCTTGCCCTTGATCTTCAGCAGGTAGGACCGTTCGAGCGTTTTG 1177347
Query 66642 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 66694
|| |||||||| ||||| |||||| || ||||| || || ||||||| ||
Sbjct 1177346 AAGCCAAAATAATTGTACCCAAAGTCGCGATCGTAGATGATGGCCGAGTTCAG 1177294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658093885081280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |