Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq8981 107 1e-18
seq9254 84.2 2e-11
>seq8981
Length=1360667
Score = 107 bits (118), Expect = 1e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 33525 CGATGGGTGCAAATGCGTCAAGATCAAGCTGCGCAAGATACGCATACCAGAGATGGGCGA 33584
||| || | ||| | | ||||||| ||||| | | || || || |||| |||||
Sbjct 1108239 CGAGGGATACAAGTTCTGCAAGATCCGTGTGCGCTCGGTGCGTATCCCGCAGATTGGCGA 1108180
Query 33585 CAAGTTTGCATCGTT-CACGGCCCAGAAGGGCACGTGCGGCATGATGTACGACCAGTGGG 33643
||||||||||||| ||||| | ||||||| || |||||||| |||| ||| ||
Sbjct 1108179 CAAGTTTGCATCGCGGCACGGGC-AGAAGGGAACCTGCGGCATTCAGTACCGGCAGGAGG 1108121
Query 33644 ACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCATGCGTTCC 33703
| |||||||||||| ||| ||| | |||||| | ||||||||||||| || |||
Sbjct 1108120 ATATGCCGTTCACGTGCGAGGGCATTACGCCGGACATTATCATCAACCCGCACGCCATCC 1108061
Query 33704 CCTCGCGCATGAC 33716
| ||||| |||||
Sbjct 1108060 CGTCGCGTATGAC 1108048
>seq9254
Length=4138565
Score = 84.2 bits (92), Expect = 2e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 22789 TTTGCGGCCATATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAAC 22848
||||| || || |||||||| ||||| || || |||||||| ||| | || || |||
Sbjct 2197331 TTTGCCGCTATCTTCTGGCTTAAGAAGCGAGGACTGATGCCAGGCTTGACCTTCTCGAAC 2197272
Query 22849 GAGTTGATTAGCCGTGACGAAGGTCTACACTGTGACTTTGCTTG 22892
||| ||||| |||||||| || | |||||||||||||||||
Sbjct 2197271 GAGCTGATTTCGCGTGACGAGGGCTTGCACTGTGACTTTGCTTG 2197228
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356191955401576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |