Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 255 8e-63
>seq9207
Length=1443628
Score = 255 bits (282), Expect = 8e-63
Identities = 1184/1856 (64%), Gaps = 36/1856 (2%)
Strand=Plus/Minus
Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAA 78798
|| || || || || ||||||||||| ||||| || || || | |||| ||||||||
Sbjct 1179134 GCCGGCTTGGTGCGCAGATAGTACATGCCCGTCTTCAGGCCCATCTTCCAGCCGTAGAAG 1179075
Query 78799 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 78858
|| || ||| || ||| || |||| || || | || || || | || ||
Sbjct 1179074 TGAATCGACGTCAGCTTGCCGTAGTTCGGTTCGGCCACGTGAATGTTGAACGACTGGGAC 1179015
Query 78859 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 78918
||||||||||| || |||| ||| || |||||||| ||| ||| || | || |||
Sbjct 1179014 TGATCGATGAACGCACCCCGGTCCGCGGCCATTTTGATGCACGTTTTCACCGATATCTCC 1178955
Query 78919 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTT-TGTATTC--TGAATGGA 78974
|| | || || || | |||| | || | |||| | | || | || || ||
Sbjct 1178954 CACACCGTCTTGTACAGGTCGCGGATGTGCTGC-GGAATTTCCTCGATCCGCTGTATCGA 1178896
Query 78975 TCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAA 79034
|| | || | || ||||| || || |||| ||| | ||||| |
Sbjct 1178895 ACCGTTGTGCGCAAGGATTTGGTTCTTCATATCGTCATCCCACAGGCCGAGTTCGGTCAG 1178836
Query 79035 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 79094
| | || ||||| | || || || || || || || |||| || | |||| ||||
Sbjct 1178835 ATCCTGCAGCAGATGGTGGTTGACCACCTGGAACTCGCCCGACAGCACGCGCCGATTGTA 1178776
Query 79095 AATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGC 79154
| || || || || || | ||| || || || |||| |||||| || || || ||
Sbjct 1178775 GACGTTCGAAGTGTACGGCTCGAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGAGGC 1178716
Query 79155 CGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTG--ATTTTATCT 79212
|| ||||| ||||||| || | ||| | | ||| ||| | | || || ||
Sbjct 1178715 GGTCGGCATCGGTGCCAGCAGGAGCGAATTCCGGATACC--ATGCTTGGCAATCTTTTCC 1178658
Query 79213 TTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGA 79272
|| || |||| | ||| || || | ||| | ||| | || || || ||
Sbjct 1178657 TTCAGCTCGGCCCAGTTCCACAGGTCCGTTGGGGTCTTCTCCCACATGTCGTACTGCAGG 1178598
Query 79273 ATACCGTTACT-AGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAA 79331
|| || || || | || | ||| ||| ||||| || || || || |||| ||
Sbjct 1178597 ATTCCCTTGCTCACCGGACAGCCCTC-GTACGTTTCGTACGGACCGTCGCGGGCGGCCAA 1178539
Query 79332 TTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATC 79391
||||| || ||||| | || || || || ||||| || || |||| || || || |
Sbjct 1178538 CTCACAGCTAGCCTCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCAGCTT 1178479
Query 79392 TTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTG 79451
||||||||| || || | |||| | |||||| ||||| || || | ||| ||
Sbjct 1178478 TTGTGCTTCCTCACTTTCGTACGGATGGCGCATGAGAATGAACGCATCGGCCATTCCCTG 1178419
Query 79452 AACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATA 79511
|| || ||||||||||||| || | | | || ||| | || || || | || ||
Sbjct 1178418 CACGCCGATACCGATAGGTCGGTGGCGCATGTTGGAACGCTTCGCCTCCGGCACCGGGTA 1178359
Query 79512 ATAATTAATATCTATAATTTTATTGAGATTCC---TGACTATTACTTTGACCACATCCTT 79568
|| || || || || ||||| || || || | |||| || ||| | || |||||
Sbjct 1178358 GTAGTTGATGTCGATGATTTTGTTCAGGTTGCGCGTGACGATC---TTGGCGACCTCCTT 1178302
Query 79569 TAGTTTGAGAAAATCAAATCGTCC-ATCTA---TTACAAACATGTTCAACGCGACAGATG 79624
|| || | || || | ||| | ||| | ||||||||||||| ||| | || |
Sbjct 1178301 CAGCTTCACGAAGTCGTA-CGTGCGATCCGGCCTCACAAACATGTTCAGCGCAATCGACG 1178243
Query 79625 CCAGATTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATTTCAGTGCAGAG 79682
||||||| || || || | || | | || || || | | || || ||||| ||
Sbjct 1178242 CCAGATTGCACACCGCAATTTCGTC--CTTCGACGAGTACTCGACGATCTCCGTGCACAG 1178185
Query 79683 GTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTT 79742
||| ||||| || || || | || || || || ||||| ||| |||||||||||
Sbjct 1178184 GTTCGAGCACTTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCCTT 1178125
Query 79743 ATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGAC 79802
|| || ||| |||| || || || | ||| || || || ||||| ||| | |
Sbjct 1178124 GTAGAGCATGTACGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAACCACAGATC 1178065
Query 79803 TCGAGCCTTTA--TTATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGT 79860
| ||||| | | || || | | ||| | ||||| || || | ||
Sbjct 1178064 CTGCGCCTTCACCTGCCGGA--TGAACCGACCTTCCTTCTCGTAGCCCGTGTACAGCCGC 1178007
Query 79861 TCGAACTCGTCTCCCCAA-ACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGA 79919
|| ||||| || ||||| || || | | || || || |||| |||||||| |
Sbjct 1178006 TCAAACTCTTCGCCCCACGACTCCGAC-AGCCCGGGGCAGTCGTGCGGACACATAAGGCT 1177948
Query 79920 CCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 79979
|||| | | | ||| || || ||||| || ||||| || | ||| || || ||
Sbjct 1177947 CCACATTTCGTTCGCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAGCGCGTAGAA 1177888
Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039
| || | | | |||||| || || || || || || |||||||| ||| | |
Sbjct 1177887 CATGTCACGCGCACGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGAAACTCAAA 1177828
Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCC 80099
| ||| ||||||||| || | ||| ||||| | | || || || ||||| || ||
Sbjct 1177827 CACATCGCCATGCCACGGCTCGAGGTAGATGGCGAACGCACCGGGACGCTTGTTGCCGCC 1177768
Query 80100 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 80159
||| || | || | || ||||| || || || | || ||| |||| | || |||||
Sbjct 1177767 CTGGTCCACATACCGGGCCGTGTTGTTGTAGACACGCAGCATCGGAACCAACCCGTTGGA 1177708
Query 80160 TGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGA 80217
|||| || || || | || || | || | || || || | | | || | ||
Sbjct 1177707 GATACCGTTCGTGCCCGCAATGTACGTACCCTTCGCCCGGATGCAGTGCACGTTCA--GA 1177650
Query 80218 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 80277
|| || || || || || ||||| | |||||| | || | ||| || || || |||
Sbjct 1177649 CCAATGCCTCCGGCGGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAAATTCCC 1177590
Query 80278 TCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 80337
|| || || || || ||| | || ||||| ||| |||| |||| | || ||
Sbjct 1177589 TCGATACTGTCGTCCGACATCGTTAGGAGAAAGCAGGACGACAGTTGGGGCCGCTGCGTG 1177530
Query 80338 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTAC 80397
|||| ||| | ||| || || ||||||||||| || || || || | |||||||
Sbjct 1177529 GCCGCCGCAAACATGGTCGGCGAGGCGTGCGTAAAGTATCGCTCCGAAAGCAAATTGTAC 1177470
Query 80398 GTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATG 80457
|| || || || | || || ||| || || || | || || ||||| | ||||
Sbjct 1177469 GTTTCGATTGCCGCATCGATGTCCTCGCCGTGGATCCCGATGGCAACGCGCATCAGCATG 1177410
Query 80458 TGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTT 80517
||||| |||| ||| ||||||||| || || |||| || ||| || ||| | |||
Sbjct 1177409 TGCTGCGGTCGTTCGACGATCTTGCCCTTGATCTTCAGCAGGTAGGACCGTTCGAGCGTT 1177350
Query 80518 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 80573
|| || |||||||| ||||| |||||| || ||||| || || ||||||| ||
Sbjct 1177349 TTGAAGCCAAAATAATTGTACCCAAAGTCGCGATCGTAGATGATGGCCGAGTTCAG 1177294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718182679570880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |