Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq9207 255 8e-63 >seq9207 Length=1443628 Score = 255 bits (282), Expect = 8e-63 Identities = 1184/1856 (64%), Gaps = 36/1856 (2%) Strand=Plus/Minus Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAA 78798 || || || || || ||||||||||| ||||| || || || | |||| |||||||| Sbjct 1179134 GCCGGCTTGGTGCGCAGATAGTACATGCCCGTCTTCAGGCCCATCTTCCAGCCGTAGAAG 1179075 Query 78799 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 78858 || || ||| || ||| || |||| || || | || || || | || || Sbjct 1179074 TGAATCGACGTCAGCTTGCCGTAGTTCGGTTCGGCCACGTGAATGTTGAACGACTGGGAC 1179015 Query 78859 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 78918 ||||||||||| || |||| ||| || |||||||| ||| ||| || | || ||| Sbjct 1179014 TGATCGATGAACGCACCCCGGTCCGCGGCCATTTTGATGCACGTTTTCACCGATATCTCC 1178955 Query 78919 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTT-TGTATTC--TGAATGGA 78974 || | || || || | |||| | || | |||| | | || | || || || Sbjct 1178954 CACACCGTCTTGTACAGGTCGCGGATGTGCTGC-GGAATTTCCTCGATCCGCTGTATCGA 1178896 Query 78975 TCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAA 79034 || | || | || ||||| || || |||| ||| | ||||| | Sbjct 1178895 ACCGTTGTGCGCAAGGATTTGGTTCTTCATATCGTCATCCCACAGGCCGAGTTCGGTCAG 1178836 Query 79035 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 79094 | | || ||||| | || || || || || || || |||| || | |||| |||| Sbjct 1178835 ATCCTGCAGCAGATGGTGGTTGACCACCTGGAACTCGCCCGACAGCACGCGCCGATTGTA 1178776 Query 79095 AATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGC 79154 | || || || || || | ||| || || || |||| |||||| || || || || Sbjct 1178775 GACGTTCGAAGTGTACGGCTCGAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGAGGC 1178716 Query 79155 CGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTG--ATTTTATCT 79212 || ||||| ||||||| || | ||| | | ||| ||| | | || || || Sbjct 1178715 GGTCGGCATCGGTGCCAGCAGGAGCGAATTCCGGATACC--ATGCTTGGCAATCTTTTCC 1178658 Query 79213 TTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGA 79272 || || |||| | ||| || || | ||| | ||| | || || || || Sbjct 1178657 TTCAGCTCGGCCCAGTTCCACAGGTCCGTTGGGGTCTTCTCCCACATGTCGTACTGCAGG 1178598 Query 79273 ATACCGTTACT-AGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAA 79331 || || || || | || | ||| ||| ||||| || || || || |||| || Sbjct 1178597 ATTCCCTTGCTCACCGGACAGCCCTC-GTACGTTTCGTACGGACCGTCGCGGGCGGCCAA 1178539 Query 79332 TTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATC 79391 ||||| || ||||| | || || || || ||||| || || |||| || || || | Sbjct 1178538 CTCACAGCTAGCCTCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCAGCTT 1178479 Query 79392 TTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTG 79451 ||||||||| || || | |||| | |||||| ||||| || || | ||| || Sbjct 1178478 TTGTGCTTCCTCACTTTCGTACGGATGGCGCATGAGAATGAACGCATCGGCCATTCCCTG 1178419 Query 79452 AACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATA 79511 || || ||||||||||||| || | | | || ||| | || || || | || || Sbjct 1178418 CACGCCGATACCGATAGGTCGGTGGCGCATGTTGGAACGCTTCGCCTCCGGCACCGGGTA 1178359 Query 79512 ATAATTAATATCTATAATTTTATTGAGATTCC---TGACTATTACTTTGACCACATCCTT 79568 || || || || || ||||| || || || | |||| || ||| | || ||||| Sbjct 1178358 GTAGTTGATGTCGATGATTTTGTTCAGGTTGCGCGTGACGATC---TTGGCGACCTCCTT 1178302 Query 79569 TAGTTTGAGAAAATCAAATCGTCC-ATCTA---TTACAAACATGTTCAACGCGACAGATG 79624 || || | || || | ||| | ||| | ||||||||||||| ||| | || | Sbjct 1178301 CAGCTTCACGAAGTCGTA-CGTGCGATCCGGCCTCACAAACATGTTCAGCGCAATCGACG 1178243 Query 79625 CCAGATTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATTTCAGTGCAGAG 79682 ||||||| || || || | || | | || || || | | || || ||||| || Sbjct 1178242 CCAGATTGCACACCGCAATTTCGTC--CTTCGACGAGTACTCGACGATCTCCGTGCACAG 1178185 Query 79683 GTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTT 79742 ||| ||||| || || || | || || || || ||||| ||| ||||||||||| Sbjct 1178184 GTTCGAGCACTTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCCTT 1178125 Query 79743 ATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGAC 79802 || || ||| |||| || || || | ||| || || || ||||| ||| | | Sbjct 1178124 GTAGAGCATGTACGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAACCACAGATC 1178065 Query 79803 TCGAGCCTTTA--TTATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGT 79860 | ||||| | | || || | | ||| | ||||| || || | || Sbjct 1178064 CTGCGCCTTCACCTGCCGGA--TGAACCGACCTTCCTTCTCGTAGCCCGTGTACAGCCGC 1178007 Query 79861 TCGAACTCGTCTCCCCAA-ACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGA 79919 || ||||| || ||||| || || | | || || || |||| |||||||| | Sbjct 1178006 TCAAACTCTTCGCCCCACGACTCCGAC-AGCCCGGGGCAGTCGTGCGGACACATAAGGCT 1177948 Query 79920 CCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 79979 |||| | | | ||| || || ||||| || ||||| || | ||| || || || Sbjct 1177947 CCACATTTCGTTCGCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAGCGCGTAGAA 1177888 Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039 | || | | | |||||| || || || || || || |||||||| ||| | | Sbjct 1177887 CATGTCACGCGCACGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGAAACTCAAA 1177828 Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCC 80099 | ||| ||||||||| || | ||| ||||| | | || || || ||||| || || Sbjct 1177827 CACATCGCCATGCCACGGCTCGAGGTAGATGGCGAACGCACCGGGACGCTTGTTGCCGCC 1177768 Query 80100 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 80159 ||| || | || | || ||||| || || || | || ||| |||| | || ||||| Sbjct 1177767 CTGGTCCACATACCGGGCCGTGTTGTTGTAGACACGCAGCATCGGAACCAACCCGTTGGA 1177708 Query 80160 TGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGA 80217 |||| || || || | || || | || | || || || | | | || | || Sbjct 1177707 GATACCGTTCGTGCCCGCAATGTACGTACCCTTCGCCCGGATGCAGTGCACGTTCA--GA 1177650 Query 80218 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 80277 || || || || || || ||||| | |||||| | || | ||| || || || ||| Sbjct 1177649 CCAATGCCTCCGGCGGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAAATTCCC 1177590 Query 80278 TCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 80337 || || || || || ||| | || ||||| ||| |||| |||| | || || Sbjct 1177589 TCGATACTGTCGTCCGACATCGTTAGGAGAAAGCAGGACGACAGTTGGGGCCGCTGCGTG 1177530 Query 80338 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTAC 80397 |||| ||| | ||| || || ||||||||||| || || || || | ||||||| Sbjct 1177529 GCCGCCGCAAACATGGTCGGCGAGGCGTGCGTAAAGTATCGCTCCGAAAGCAAATTGTAC 1177470 Query 80398 GTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATG 80457 || || || || | || || ||| || || || | || || ||||| | |||| Sbjct 1177469 GTTTCGATTGCCGCATCGATGTCCTCGCCGTGGATCCCGATGGCAACGCGCATCAGCATG 1177410 Query 80458 TGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTT 80517 ||||| |||| ||| ||||||||| || || |||| || ||| || ||| | ||| Sbjct 1177409 TGCTGCGGTCGTTCGACGATCTTGCCCTTGATCTTCAGCAGGTAGGACCGTTCGAGCGTT 1177350 Query 80518 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 80573 || || |||||||| ||||| |||||| || ||||| || || ||||||| || Sbjct 1177349 TTGAAGCCAAAATAATTGTACCCAAAGTCGCGATCGTAGATGATGGCCGAGTTCAG 1177294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718182679570880