Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq9207 255 8e-63 >seq9207 Length=1443628 Score = 255 bits (282), Expect = 8e-63 Identities = 1173/1851 (63%), Gaps = 29/1851 (2%) Strand=Plus/Minus Query 70823 CGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAAT 70882 |||||| || || |||||||||||||| || || || || | |||| ||||| || | Sbjct 1179132 CGGCTTG-GTGCGCAGATAGTACATGCCCGTCTTCAGGCCCATCTTCCAGCCGTAGAAGT 1179074 Query 70883 GCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTT 70942 | || ||| || ||| ||| | || ||||| | |||||| || | |||||| | Sbjct 1179073 GAATCGACGTCAGCTTGCCGTAGTTCGGTTCGGCCACGTGAATGTTGAACGACTGGGACT 1179014 Query 70943 GATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCC 71002 |||||||||| || |||| ||| || |||||||| ||| ||| || | || |||| Sbjct 1179013 GATCGATGAACGCACCCCGGTCCGCGGCCATTTTGATGCACGTTTTCACCGATATCTCCC 1178954 Query 71003 AAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTT-TGTATTC--TGAATGGAT 71058 | | || || || | |||| | || | |||| | | || | || || || Sbjct 1178953 ACACCGTCTTGTACAGGTCGCGGATGTGCTGC-GGAATTTCCTCGATCCGCTGTATCGAA 1178895 Query 71059 CCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAA 71118 || | |||| || || || || || |||| ||| | ||||| | | Sbjct 1178894 CCGTTGTGCGCAAGGATTTGGTTCTTCATATCGTCATCCCACAGGCCGAGTTCGGTCAGA 1178835 Query 71119 ACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAA 71178 | || ||||| | || || || || || || || |||| || | ||| |||| Sbjct 1178834 TCCTGCAGCAGATGGTGGTTGACCACCTGGAACTCGCCCGACAGCACGCGCCGATTGTAG 1178775 Query 71179 ATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCA 71238 | || || ||||| || | ||||| || || |||| |||||| || || || || Sbjct 1178774 ACGTTCGAAGTGTACGGCTCGAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGAGGCG 1178715 Query 71239 GTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGG--ATTTTATCTT 71296 |||||||| ||||||| || || ||| | | |||||| | || || || || | Sbjct 1178714 GTCGGCATCGGTGCCAGCAGGAGCGAATTCCGGATACCATGC--TTGGCAATCTTTTCCT 1178657 Query 71297 TTAGAGATTCCCAATTCCAAAGATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNA 71356 | || |||| ||||| || |||| ||| | Sbjct 1178656 TCAGCTCGGCCCAGTTCCACAGGTCCGTTGGGGTCTTCTCCCACATGTCGTACTGCAGGA 1178597 Query 71357 TGCCGTTACT-AGCGTATGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGT 71415 | || || || | || | ||| | || || ||||| || || || |||| | Sbjct 1178596 TTCCCTTGCTCACCGGACAGCCCT-CGTACGTTTCGTACGGACCGTCGCGGGCGGCCAAC 1178538 Query 71416 TCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCT 71475 ||||| || ||||| | || ||||| || ||||| || || |||| || || || | | Sbjct 1178537 TCACAGCTAGCCTCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCAGCTTT 1178478 Query 71476 TGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGA 71535 ||||||||| || || | |||| | |||||| ||||| || || | ||| || Sbjct 1178477 TGTGCTTCCTCACTTTCGTACGGATGGCGCATGAGAATGAACGCATCGGCCATTCCCTGC 1178418 Query 71536 ACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAA 71595 ||||| ||||||||||||| ||| | | | || ||| | || || || | || || Sbjct 1178417 ACGCCGATACCGATAGGTCGGTGGCGCATGTTGGAACGCTTCGCCTCCGGCACCGGGTAG 1178358 Query 71596 TAATTAATATCTATAATTTTATTGAGATTTC---TGACTATTACTTTGACCACATCCTTT 71652 || || || || || ||||| || || || | |||| || ||| | || ||||| Sbjct 1178357 TAGTTGATGTCGATGATTTTGTTCAGGTTGCGCGTGACGATC---TTGGCGACCTCCTTC 1178301 Query 71653 AGTTTGAGAAAATCAAATCTCCCATCTA---TTACAAACACGTTCAAGGCAACAGATGCC 71709 || || | || || | | | ||| | ||||||| ||||| |||| || ||| Sbjct 1178300 AGCTTCACGAAGTCGTACGTGCGATCCGGCCTCACAAACATGTTCAGCGCAATCGACGCC 1178241 Query 71710 AGATTACAAACGGCTACCTCATTAGCATCGGCA--TATTGTATAATTTCAGTGCAAAGAT 71767 ||||| || || || | || | | ||| | || | | || || ||||| || | Sbjct 1178240 AGATTGCACACCGCAATTTCGTC--CTTCGACGAGTACTCGACGATCTCCGTGCACAGGT 1178183 Query 71768 TACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 71827 | |||||||| || || | || || || || ||||| ||| ||||||||||| | Sbjct 1178182 TCGAGCACTTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCCTTGT 1178123 Query 71828 AAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC 71887 | || || |||| || || || | ||| || || || ||||| ||| | | Sbjct 1178122 AGAGCATGTACGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAACCACAGATCCT 1178063 Query 71888 GAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGA 71947 | ||||| | || | | ||| | ||||| || || | || || | Sbjct 1178062 GCGCCTTCACCTGCCGGATGAACCGACCTTCCTTCTCGTAGCCCGTGTACAGCCGCTCAA 1178003 Query 71948 ACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACT 72007 |||| || ||||| | | | || || || || | ||||||||| | |||| Sbjct 1178002 ACTCTTCGCCCCACGACTCCGACAGCCCGGGGCAGTCGTGCGGACACATAAGGCTCCACA 1177943 Query 72008 CTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGAT 72067 | | | | | || || ||||| || ||||| || | ||| || || || | | Sbjct 1177942 TTTCGTTCGCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAGCGCGTAGAACATGT 1177883 Query 72068 CTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATAT 72127 | | | | |||||| || || || || || || |||||||| ||| | | | || Sbjct 1177882 CACGCGCACGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGAAACTCAAACACAT 1177823 Query 72128 CAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGAT 72187 | ||||||||| || | ||| ||||| | | || || || ||||| || ||||| | Sbjct 1177822 CGCCATGCCACGGCTCGAGGTAGATGGCGAACGCACCGGGACGCTTGTTGCCGCCCTGGT 1177763 Query 72188 CTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCAC 72247 | | || | || ||||| || || || | || ||| |||| | || ||||| || Sbjct 1177762 CCACATACCGGGCCGTGTTGTTGTAGACACGCAGCATCGGAACCAACCCGTTGGAGATAC 1177703 Query 72248 CATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGATAGACCTAT 72305 | || || || | || || | || | || || || | ||| || | |||| || Sbjct 1177702 CGTTCGTGCCCGCAATGTACGTACCCTTCGCCCGGATGCAGTGCACGTTCA--GACCAAT 1177645 Query 72306 TCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTAT 72365 || || || || ||||| | |||||| | || | ||| || || || ||||| || Sbjct 1177644 GCCTCCGGCGGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAAATTCCCTCGAT 1177585 Query 72366 ACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGC 72425 ||| || ||| ||| | || ||||| ||| |||| |||| | || || |||| Sbjct 1177584 ACTGTCGTCCGACATCGTTAGGAGAAAGCAGGACGACAGTTGGGGCCGCTGCGTGGCCGC 1177525 Query 72426 ATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTC 72485 ||| | ||| || || ||||||||||| || || || || | ||||||||| || Sbjct 1177524 CGCAAACATGGTCGGCGAGGCGTGCGTAAAGTATCGCTCCGAAAGCAAATTGTACGTTTC 1177465 Query 72486 AATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTG 72545 || || | || || ||| || || || | || || ||||| | ||| ||||| Sbjct 1177464 GATTGCCGCATCGATGTCCTCGCCGTGGATCCCGATGGCAACGCGCATCAGCATGTGCTG 1177405 Query 72546 AGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAA 72605 |||| ||| ||||||||| || || |||| || |||||| ||| | ||||| || Sbjct 1177404 CGGTCGTTCGACGATCTTGCCCTTGATCTTCAGCAGGTAGGACCGTTCGAGCGTTTTGAA 1177345 Query 72606 ACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 72656 |||||||| ||||| |||||| || ||||| || || |||| || || Sbjct 1177344 GCCAAAATAATTGTACCCAAAGTCGCGATCGTAGATGATGGCCGAGTTCAG 1177294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671058730409920