Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 255 8e-63
>seq9207
Length=1443628
Score = 255 bits (282), Expect = 8e-63
Identities = 1173/1851 (63%), Gaps = 29/1851 (2%)
Strand=Plus/Minus
Query 70823 CGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAAT 70882
|||||| || || |||||||||||||| || || || || | |||| ||||| || |
Sbjct 1179132 CGGCTTG-GTGCGCAGATAGTACATGCCCGTCTTCAGGCCCATCTTCCAGCCGTAGAAGT 1179074
Query 70883 GCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTT 70942
| || ||| || ||| ||| | || ||||| | |||||| || | |||||| |
Sbjct 1179073 GAATCGACGTCAGCTTGCCGTAGTTCGGTTCGGCCACGTGAATGTTGAACGACTGGGACT 1179014
Query 70943 GATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCC 71002
|||||||||| || |||| ||| || |||||||| ||| ||| || | || ||||
Sbjct 1179013 GATCGATGAACGCACCCCGGTCCGCGGCCATTTTGATGCACGTTTTCACCGATATCTCCC 1178954
Query 71003 AAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTT-TGTATTC--TGAATGGAT 71058
| | || || || | |||| | || | |||| | | || | || || ||
Sbjct 1178953 ACACCGTCTTGTACAGGTCGCGGATGTGCTGC-GGAATTTCCTCGATCCGCTGTATCGAA 1178895
Query 71059 CCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAA 71118
|| | |||| || || || || || |||| ||| | ||||| | |
Sbjct 1178894 CCGTTGTGCGCAAGGATTTGGTTCTTCATATCGTCATCCCACAGGCCGAGTTCGGTCAGA 1178835
Query 71119 ACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAA 71178
| || ||||| | || || || || || || || |||| || | ||| ||||
Sbjct 1178834 TCCTGCAGCAGATGGTGGTTGACCACCTGGAACTCGCCCGACAGCACGCGCCGATTGTAG 1178775
Query 71179 ATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCA 71238
| || || ||||| || | ||||| || || |||| |||||| || || || ||
Sbjct 1178774 ACGTTCGAAGTGTACGGCTCGAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGAGGCG 1178715
Query 71239 GTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGG--ATTTTATCTT 71296
|||||||| ||||||| || || ||| | | |||||| | || || || || |
Sbjct 1178714 GTCGGCATCGGTGCCAGCAGGAGCGAATTCCGGATACCATGC--TTGGCAATCTTTTCCT 1178657
Query 71297 TTAGAGATTCCCAATTCCAAAGATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNA 71356
| || |||| ||||| || |||| ||| |
Sbjct 1178656 TCAGCTCGGCCCAGTTCCACAGGTCCGTTGGGGTCTTCTCCCACATGTCGTACTGCAGGA 1178597
Query 71357 TGCCGTTACT-AGCGTATGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGT 71415
| || || || | || | ||| | || || ||||| || || || |||| |
Sbjct 1178596 TTCCCTTGCTCACCGGACAGCCCT-CGTACGTTTCGTACGGACCGTCGCGGGCGGCCAAC 1178538
Query 71416 TCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCT 71475
||||| || ||||| | || ||||| || ||||| || || |||| || || || | |
Sbjct 1178537 TCACAGCTAGCCTCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCAGCTTT 1178478
Query 71476 TGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGA 71535
||||||||| || || | |||| | |||||| ||||| || || | ||| ||
Sbjct 1178477 TGTGCTTCCTCACTTTCGTACGGATGGCGCATGAGAATGAACGCATCGGCCATTCCCTGC 1178418
Query 71536 ACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAA 71595
||||| ||||||||||||| ||| | | | || ||| | || || || | || ||
Sbjct 1178417 ACGCCGATACCGATAGGTCGGTGGCGCATGTTGGAACGCTTCGCCTCCGGCACCGGGTAG 1178358
Query 71596 TAATTAATATCTATAATTTTATTGAGATTTC---TGACTATTACTTTGACCACATCCTTT 71652
|| || || || || ||||| || || || | |||| || ||| | || |||||
Sbjct 1178357 TAGTTGATGTCGATGATTTTGTTCAGGTTGCGCGTGACGATC---TTGGCGACCTCCTTC 1178301
Query 71653 AGTTTGAGAAAATCAAATCTCCCATCTA---TTACAAACACGTTCAAGGCAACAGATGCC 71709
|| || | || || | | | ||| | ||||||| ||||| |||| || |||
Sbjct 1178300 AGCTTCACGAAGTCGTACGTGCGATCCGGCCTCACAAACATGTTCAGCGCAATCGACGCC 1178241
Query 71710 AGATTACAAACGGCTACCTCATTAGCATCGGCA--TATTGTATAATTTCAGTGCAAAGAT 71767
||||| || || || | || | | ||| | || | | || || ||||| || |
Sbjct 1178240 AGATTGCACACCGCAATTTCGTC--CTTCGACGAGTACTCGACGATCTCCGTGCACAGGT 1178183
Query 71768 TACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 71827
| |||||||| || || | || || || || ||||| ||| ||||||||||| |
Sbjct 1178182 TCGAGCACTTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCCTTGT 1178123
Query 71828 AAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC 71887
| || || |||| || || || | ||| || || || ||||| ||| | |
Sbjct 1178122 AGAGCATGTACGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAACCACAGATCCT 1178063
Query 71888 GAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGA 71947
| ||||| | || | | ||| | ||||| || || | || || |
Sbjct 1178062 GCGCCTTCACCTGCCGGATGAACCGACCTTCCTTCTCGTAGCCCGTGTACAGCCGCTCAA 1178003
Query 71948 ACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACT 72007
|||| || ||||| | | | || || || || | ||||||||| | ||||
Sbjct 1178002 ACTCTTCGCCCCACGACTCCGACAGCCCGGGGCAGTCGTGCGGACACATAAGGCTCCACA 1177943
Query 72008 CTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGAT 72067
| | | | | || || ||||| || ||||| || | ||| || || || | |
Sbjct 1177942 TTTCGTTCGCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAGCGCGTAGAACATGT 1177883
Query 72068 CTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATAT 72127
| | | | |||||| || || || || || || |||||||| ||| | | | ||
Sbjct 1177882 CACGCGCACGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGAAACTCAAACACAT 1177823
Query 72128 CAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGAT 72187
| ||||||||| || | ||| ||||| | | || || || ||||| || ||||| |
Sbjct 1177822 CGCCATGCCACGGCTCGAGGTAGATGGCGAACGCACCGGGACGCTTGTTGCCGCCCTGGT 1177763
Query 72188 CTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCAC 72247
| | || | || ||||| || || || | || ||| |||| | || ||||| ||
Sbjct 1177762 CCACATACCGGGCCGTGTTGTTGTAGACACGCAGCATCGGAACCAACCCGTTGGAGATAC 1177703
Query 72248 CATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGATAGACCTAT 72305
| || || || | || || | || | || || || | ||| || | |||| ||
Sbjct 1177702 CGTTCGTGCCCGCAATGTACGTACCCTTCGCCCGGATGCAGTGCACGTTCA--GACCAAT 1177645
Query 72306 TCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTAT 72365
|| || || || ||||| | |||||| | || | ||| || || || ||||| ||
Sbjct 1177644 GCCTCCGGCGGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAAATTCCCTCGAT 1177585
Query 72366 ACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGC 72425
||| || ||| ||| | || ||||| ||| |||| |||| | || || ||||
Sbjct 1177584 ACTGTCGTCCGACATCGTTAGGAGAAAGCAGGACGACAGTTGGGGCCGCTGCGTGGCCGC 1177525
Query 72426 ATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTC 72485
||| | ||| || || ||||||||||| || || || || | ||||||||| ||
Sbjct 1177524 CGCAAACATGGTCGGCGAGGCGTGCGTAAAGTATCGCTCCGAAAGCAAATTGTACGTTTC 1177465
Query 72486 AATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTG 72545
|| || | || || ||| || || || | || || ||||| | ||| |||||
Sbjct 1177464 GATTGCCGCATCGATGTCCTCGCCGTGGATCCCGATGGCAACGCGCATCAGCATGTGCTG 1177405
Query 72546 AGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAA 72605
|||| ||| ||||||||| || || |||| || |||||| ||| | ||||| ||
Sbjct 1177404 CGGTCGTTCGACGATCTTGCCCTTGATCTTCAGCAGGTAGGACCGTTCGAGCGTTTTGAA 1177345
Query 72606 ACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 72656
|||||||| ||||| |||||| || ||||| || || |||| || ||
Sbjct 1177344 GCCAAAATAATTGTACCCAAAGTCGCGATCGTAGATGATGGCCGAGTTCAG 1177294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671058730409920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |