Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 239 7e-58
seq8889 185 1e-41
seq9254 122 1e-22
seq9041 118 2e-21
>seq9207
Length=1443628
Score = 239 bits (264), Expect = 7e-58
Identities = 661/995 (66%), Gaps = 29/995 (3%)
Strand=Plus/Plus
Query 96400 TGGACTCGGCCATTGTAGACGATCGCGATTTTCAATCTTTGACCTATTTTGCATACAAGA 96459
|| |||||||||| | |||||||||| ||| | | ||||||| | ||| |
Sbjct 1177295 TGAACTCGGCCATCATCTACGATCGCGACTTTGGGTAC---AATTATTTTGGCTTCAAAA 1177351
Query 96460 CGCTAGAGCGTACCTATCTGATAAAGCTGGCCGACGGTAAGATTTGTGAACGAGTGCAGC 96519
|||| || || |||| ||| | ||| | | | || ||||| |||||| |||||
Sbjct 1177352 CGCTCGAACGGTCCTACCTGCTGAAGAT---CAAGGGCAAGATCGTCGAACGACCGCAGC 1177408
Query 96520 ACATGTACATGAGGACCGCGCTCGGTATTCACGGTCGGGATATTGAATCGGTAATCGAAA 96579
||||| ||| | || |||| || ||||| ||| || || ||| ||||||||
Sbjct 1177409 ACATGCTGATGCGCGTTGCCATCGGGATCCACGGCGAGGACATCGATGCGGCAATCGAAA 1177468
Query 96580 CGTACAATCTACTCTCGAACCGCTACTATGTACATTCGACGCCTACTCTGTGTCATGCGG 96639
|||||||| | || ||| | || |||| | || | |||| || ||| | ||||
Sbjct 1177469 CGTACAATTTGCTTTCGGAGCGATACTTTACGCACGCCTCGCCGACCATGTTTGCGGCGG 1177528
Query 96640 CAACGAATCGTTCC-AACTATGCCTCTTGCTATCTGCT--CGAACTCAAAGAGGACAGCA 96696
| ||| | || || |||| | | || |||| ||| || ||| || || ||||| |
Sbjct 1177529 CCACGCAGCGGCCCCAACTGT-CGTCCTGCTTTCTCCTAACGATGTCG--GACGACAGTA 1177585
Query 96697 TCGGTGGCGTTATGGACACGCTAAAGGACGCGGCCACC-ATTTCAAAACACTGTGGCGGT 96755
||| || || |||||||| ||| | | | ||| || || || | || ||
Sbjct 1177586 TCGAGGGAATTTACGACACGCTGAAGCA-GTGCGCACTGATCTCCAAGTCCGCCGGAGGC 1177644
Query 96756 GTAGGTTTGCATGTGCACAAGTTGCG-CTGTAAAAACTCTACGATTCATTCA----ACAA 96810
| ||| || | |||||| ||| | | || |||| | |||| || |
Sbjct 1177645 ATTGGTCTGAACGTGCAC----TGCATCCGGGCGAAGGGTACG-TACATTGCGGGCACGA 1177699
Query 96811 ACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGATACG 96870
|||| | | ||| || | || || ||||| | | ||||| | | | || || |
Sbjct 1177700 ACGGTATCTCCAACGGGTTGGTTCCGATGCTGCGTGTCTACAACAACACGGCCCGGTATG 1177759
Query 96871 TTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACG 96930
| ||||||||||| || || || || || | ||| ||||| | || || ||||| |
Sbjct 1177760 TGGACCAGGGCGGCAACAAGCGTCCCGGTGCGTTCGCCATCTACCTCGAGCCGTGGCATG 1177819
Query 96931 CGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCA 96990
|| || ||||| ||| |||| || |||||| ||||| || |||| || ||
Sbjct 1177820 GCGATGTGTTTGAGTTTCTCGATCTGAAGAAAAACACTGGCAAGGAGGAGGTCCGTGCGC 1177879
Query 96991 GGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTG 97050
| ||| |||| || || || |||||||| ||| ||||||||||||| || | | ||
Sbjct 1177880 GTGACATGTTCTACGCGCTGTGGGTGCCGGATCTGTTCATGAAGCGGGTGGAGG-CGAAC 1177938
Query 97051 GCTAC-TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAA 97109
| | |||||||| ||||| || || | ||||| ||||| || | |||||||||
Sbjct 1177939 GAAATGTGGAGCCTTATGTGTCCGCACGACTGCCCCGGGCTGTCGGAGTCGTGGGGCGAA 1177998
Query 97110 GAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGAT 97169
||||||||| |||||||| ||||||| | || || || | | | | | || |
Sbjct 1177999 GAGTTTGAGCGGCTGTACACGGGCTACGAGAAGGAAGGTCGGTTCATCCGGCAGGTGAAG 1178058
Query 97170 GCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATT 97229
|| | || |||||| || ||| | | | ||||| ||||| || ||||||||
Sbjct 1178059 GCGCAGGATCTGTGGTTCGCGATCATCGAGTCGCAGGTCGAGACGGGCGTGCCGTACATG 1178118
Query 97230 CTCTACAAGGATACCGTG-AATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGG 97288
|||||||||||| |||| || || || |||||||| | || ||||||| |||||| |
Sbjct 1178119 CTCTACAAGGAT-GCGTGCAACCGGAAGAGCAACCAGCAGAACGTGGGCACGATCAAGTG 1178177
Query 97289 CTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGT 97348
||| || ||||||||||| || || |||||| | || |||||| | || || |||
Sbjct 1178178 CTCGAACCTGTGCACGGAGATCGTCGAGTACTCGTCGAAGGACGAAATTGCGGTGTGCAA 1178237
Query 97349 TCTGGCATCGGTCAATCTGCCCAAGTTTGTAGAGG 97383
|||||| ||| | ||| || |||||| ||||
Sbjct 1178238 TCTGGCGTCGATTGCGCTGAACATGTTTGT-GAGG 1178271
Score = 131 bits (144), Expect = 2e-25
Identities = 162/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 98040 TACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGAGGT 98099
|||||||| || |||||||| || || ||| ||| | ||||| || ||| | |||
Sbjct 1178941 TACAAGACGGTGTGGGAGATATCGGTGAAAACGTGCATCAAAATGGCCGCGGACCGGGGT 1179000
Query 98100 GTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGTCGT 98159
| | ||| || ||| || |||||||| | |||| ||||| || | |||| |
Sbjct 1179001 GCGTTCATCGATCAGTCCCAGTCGTTCAACATTCACGTGGCCGAACCGAACTACGGCAAG 1179060
Query 98160 ATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCTG 98219
|||| ||||| ||||| |||| ||||| | |||||| |||||||||||||||||||||
Sbjct 1179061 CTGACGTCGATTCACTTCTACGGCTGGAAGATGGGCCTGAAGACGGGCATGTACTATCTG 1179120
Query 98220 AGAACAAAGTCGGCCACCAATGCCATACCATTTACGGTGGAC 98261
| || ||| ||||| || || || | ||||||||||||
Sbjct 1179121 CGCACCAAGCCGGCCGTGAACGCGATCCAGTTTACGGTGGAC 1179162
>seq8889
Length=89190
Score = 185 bits (204), Expect = 1e-41
Identities = 392/581 (67%), Gaps = 8/581 (1%)
Strand=Plus/Minus
Query 49797 CCGTGGAGCCTCCCATGTTTCTATACATGATGGCCTTCATGACGACCACGGTCATCGAGC 49856
|||| || || | ||||| || ||||||||||| |||||| |||| |||| ||||||
Sbjct 79117 CCGTCGAACCGTCGATGTTCCTGTACATGATGGCGTTCATGCTGACCTCGGTTGTCGAGC 79058
Query 49857 AGGCGTTTTACGTGTACCAAGCGTGCACCGTCAACCATGGCTACTCGCCAGAGGTGTGCC 49916
|||| |||| | | ||| ||||||||||||| ||||||| ||||||| || | ||||
Sbjct 79057 AGGCTTTTTTCCTCTACAAAGCGTGCACCGTGGACCATGGGTACTCGCACGAAATTTGCC 78998
Query 49917 ACAACATTAGCCAGTACGATGACATCAACAACCGAGTCCAGCAGACTGTGTCTACATTTC 49976
||||| |||||| | ||||| || || | |||||| ||| || || || |
Sbjct 78997 TAAACATCGAACAGTACCAGGACATTAAGAAGCAGGTCCAGGTGACAACCTCGACGTTCC 78938
Query 49977 ATCAGTGGAACGGTGTAGCCAGTCATGTGGTGCCCTTTATATTGGCCTTTTTCCTAGGAT 50036
| ||||||||| | |||| | || || || | | | || |||| || ||
Sbjct 78937 ACCAGTGGAACAACATCGCCATGTACGTCGTACCGATCGTCCTCGCTCTTTTTCTTGGTG 78878
Query 50037 CCTATAGTGATAGGCGCGGTAGAAAGATTGTACTCGTATGTGGACTCGTAGGTAAACTCT 50096
||| || |||||||| | ||| | |||| || || || || || |
Sbjct 78877 CCTGGTCGGACCGGCGCGGTCGGAAGCTACCACTCATACTCGGTCTTACCGGAAAGTTGA 78818
Query 50097 TTTTCTCGGCAATGCTAACCGTAAACAGTCTCAAG--AGC-TGGCCCGTAGAGTATATAA 50153
| | |||| ||| | ||||||| | || | | | ||||| || ||||| || |
Sbjct 78817 TCTACTCGCTTATGATCGTGGTAAACACACGCATGCCATCGTGGCCAGTTGAGTACATCA 78758
Query 50154 TCTACACGGCATCCTTTCCGAGTGCACTCACCGGAGCCGATTTGACCATATTCGCAGCGT 50213
|||||||||| | | ||||| | || ||||||||||| | |||| || || | |
Sbjct 78757 TCTACACGGCGACAATCCCGAGCGTTCTGACCGGAGCCGACATTGCCATCTTTGCCTCCT 78698
Query 50214 GCTTTGCCTACATTGCCGATGTGTCGACTGTGGAGAATCGCACGCTACGAGTGGGCATCT 50273
|||| || ||||| |||| | |||| || ||| | || || ||||| | ||||
Sbjct 78697 GCTTCGCGTACATCTCCGACATAACGACGGTCGAGGAGCGTACCCTACGCATCACCATCC 78638
Query 50274 TGGATGCCGTCTACCTGAGCACGATGCCAACCGGTGTGGCGATCGGTAGTGTGCTGTGGA 50333
| ||||| |||||| ||||||||||||| ||| || || |||||| |||| | | |
Sbjct 78637 TCGATGCGACCTACCTCAGCACGATGCCAATCGGGGTCGCCCTCGGTAATGTGATCTTTA 78578
Query 50334 AGCGATTCCG----ATCCTACCCCATCATGTTTGCAATCAA 50370
| | | | | ||| ||| | |||||||| || |||||
Sbjct 78577 A-CCACACGGGCAAATCGTACACGATCATGTTCGCCATCAA 78538
>seq9254
Length=4138565
Score = 122 bits (134), Expect = 1e-22
Identities = 234/341 (69%), Gaps = 13/341 (4%)
Strand=Plus/Minus
Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489
|| || || |||||||| ||||| || ||||| || || ||||| || ||||| |||
Sbjct 2197373 GTCGCGTTTGCCGCCGTCGAGGGAATTTTCTTCAGCGGCAGCTTTGCCGCTATCTTCTGG 2197314
Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549
|| |||||||| ||||| ||||| || |||| | |||||| | || || || |||
Sbjct 2197313 CTTAAGAAGCGAGGACTGATGCCAGGCTTGACCTTCTCGAACGAGCTGATTTCGCGTGAC 2197254
Query 125550 GAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAG-TG 125608
|||||| | |||||||||||||| || |||| ||| || ||| || || |
Sbjct 2197253 GAGGGCTTGCACTGTGACTTTGCTTGCCTTATGTT---CAAATACCTGGTTCAAAAGCCG 2197197
Query 125609 CAGATCCAGCG-ATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAG 125667
| | |||| ||| || ||||| | |||||| ||| || ||||| |
Sbjct 2197196 ACGCGCGAGCGTGTGACTAG--CATCA------TTCGCGATGCGGTGGTAATCGAACAGG 2197145
Query 125668 AGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCG 125727
|||| || ||| | | || || ||| ||| | ||||||||||| | || ||||
Sbjct 2197144 AGTTCCTTACCAAGGCGCTGCCAGTCGATATGCTGGGCATGAACTGTGACCTGATGTCGC 2197085
Query 125728 AGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTG 125768
||||||| ||||| || || || || || ||| |||||||
Sbjct 2197084 AGTACATCGAGTTCGTTGCCGACCGGCTGCTGGTCGAGTTG 2197044
Score = 122 bits (134), Expect = 1e-22
Identities = 197/282 (70%), Gaps = 11/282 (4%)
Strand=Plus/Minus
Query 125038 AGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATT 125097
|||| |||| || || |||||||| || ||||| || || || |||||| || | || |
Sbjct 2197841 AGGCCGAGGCATCTTTCTGGACGGTAGAGGAGGTAGACCTCTCGAAGGACATGAAGGACT 2197782
Query 125098 GGGAGACTCGTTTGACTGAAACTGAGCGAGAGT----TTATATCGCACATTTTGGCCTTC 125153
||||| ||||| ||||| |||||| || | || |||||| | | || |||
Sbjct 2197781 GGGAG--TCGTT-----GAAACCGAGCGAACGTCACTTCATCTCGCACGTGCTCGCTTTC 2197729
Query 125154 TTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTG 125213
|| |||| || || |||||||||||||| |||||| | ||||||| || || ||
Sbjct 2197728 TTCGCCGCATCGGACGGAATCGTCAACGAGAATCTGGTCGAACGATTCAGCCAGGAAGTG 2197669
Query 125214 ACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCG 125273
| | || | | ||||| || || ||||| ||| ||| || ||||| |||
Sbjct 2197668 CAGGTGACCGAAGCGCGCTGCTTCTATGGTTTCCAGATCGCGATGGAAAACGTCCACAGC 2197609
Query 125274 GAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG 125315
|| |||||||| ||||| |||| ||||||||| || |||
Sbjct 2197608 GAGATGTACTCCCTGCTGATCGACACGTACATTCGTGACCCG 2197567
>seq9041
Length=338010
Score = 118 bits (130), Expect = 2e-21
Identities = 193/273 (71%), Gaps = 4/273 (1%)
Strand=Plus/Plus
Query 70145 GGTCAGGGTGTTGATCAATTG-CAGACAATCATTGACACTCTCAAGACCAATCCAACAGA 70203
||| | ||| ||||||| || | || | | || |||| | |||| |||||| ||
Sbjct 58713 GGTAAAGGTATTGATCAGCTGGCTGA-AGTAATCGACAAGATAAAGAACAATCCTTACGA 58771
Query 70204 TAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACC 70263
| | | ||| | ||| || |||||||||| || | | | ||||||||||| ||
Sbjct 58772 TCGTCGAATCATCATGAGCGCATGGAATCCAATCGACATTCCGAACATGGCACTACCCCC 58831
Query 70264 GTGTCACTGTTTGGCTCAGTTTTAC-TCGTACGATGGCAAATTGTCATGCTTAATGTATC 70322
|| || |||||||| || |||||| | | | ||||| || |||| ||| |||||||
Sbjct 58832 TTGCCATTGTTTGGCCCAATTTTACGTAGCA-GATGGGGAACTGTCCTGCCAGATGTATC 58890
Query 70323 AGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTGA 70382
| || |||||| | || || || |||||||| || ||||||||||| || || | |
Sbjct 58891 AACGGTCGGCCGACGTAGGACTAGGAGTACCCTTCAATATTGCAAGCTACTCCTTGCTCA 58950
Query 70383 CGCACATGATTGCTCACATTACCGGCCTGAAAG 70415
| ||||||||||| ||| | || || || ||||
Sbjct 58951 CACACATGATTGCCCACGTCACTGGACTTAAAG 58983
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740970347001920
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