Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq9246 147 2e-30
>seq9246
Length=874175
Score = 147 bits (162), Expect = 2e-30
Identities = 235/336 (70%), Gaps = 6/336 (2%)
Strand=Plus/Minus
Query 5504 CCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTTCC 5563
|||||||| || || |||||||| || | || || | | ||| | | | |||||||
Sbjct 356005 CCCGTGGAGCCAAACCCGCCTGCACCACGCTCGGTGTTGCTGAGGGATGGAAGCTCTTCC 355946
Query 5564 ACATCGGGGAACGCAGCGCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACC 5623
| ||| || | || ||||| || | |||||| || || ||||| ||||||||
Sbjct 355945 AAATCCGGATAAGCGATTTTTTCGCAAATGAACTGCGCAATACGATCGCCTTTCTTTACC 355886
Query 5624 TCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCG 5683
||||| ||| | | | | ||||||||| || || || ||||| || |||||||| ||
Sbjct 355885 TCGAACTCGGTCTCGGAGTGGTTGAACAGGACAACTCCGACGTTTCCCCGGTAGTCCTCG 355826
Query 5684 TCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCC 5743
|| | ||| || || || || |||||||| | |||||| |||| |||||| || || ||
Sbjct 355825 TCGACCACACCGGCACCGACATCGATGAAATTCTTGACGGCCAAGCCGGATCGTGGCGCT 355766
Query 5744 ACGCGGCCGTAGCACCCATCGGGAAGCTGTATCTGCAGGTCCGTGAACACCACTCGCCG- 5802
|| |||||||| || || || || | ||| | || | ||| || || |||| || |
Sbjct 355765 ACTCGGCCGTAACAACCCTCCGGCACCTGCACTTGGATGTCGGT---CATCACTAGCTGT 355709
Query 5803 --ACCGCCCGCAGGGACGATGCAGTCGCAAGCGCTG 5836
|||| || || ||| || ||||| | || |||
Sbjct 355708 TTTCCGCGGGCTGGAACGGTGTAGTCGTAGGCACTG 355673
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430004125565504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |