Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq8899 105 6e-18
seq9240 98.7 8e-16
seq9325 95.1 1e-14
>seq8899
Length=3132144
Score = 105 bits (116), Expect = 6e-18
Identities = 148/205 (72%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582
||||| || |||||| ||||||||||| || | || || || | |||||||||||
Sbjct 384477 TGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCGA-AAGCGTACGGCCATCCTCCAGCTG 384535
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||||||| || | || | |||||| ||||| ||| | | |||||| ||| ||||||
Sbjct 384536 CTTACCGGCGAAGATCAGACGCTGTTGATCTGGCGGAATTCCTTCCTTATCCTGAATTTT 384595
Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702
| ||| | | | | || || || | | ||| ||| | || ||||| || || ||
Sbjct 384596 CGCCTTCACATTCTCGATCGTGTCCGACGGCTCGACCTCAAGGGTGATGGTCTTGCCAGT 384655
Query 48703 GAGAGTTTTCACAAAAATCTGCATC 48727
||| |||||||| ||||||||||||
Sbjct 384656 GAGGGTTTTCACGAAAATCTGCATC 384680
>seq9240
Length=943838
Score = 98.7 bits (108), Expect = 8e-16
Identities = 150/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576
||| | ||| || || |||||| ||||||||||| || | || || | |||||
Sbjct 630374 CACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGTCCATCCTC 630433
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
||||||||| ||| || | || | ||||||||| ||| ||| | | |||||||||
Sbjct 630434 CAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 630493
Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696
|| ||| ||| | | | | || ||||| | | ||| ||| | || ||||| ||
Sbjct 630494 GATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTT 630553
Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCATCGTG 48730
||| ||||| ||||| || || ||||||||| ||
Sbjct 630554 ACCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 630587
>seq9325
Length=2359367
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
|||||||| | | | || || ||||| || ||||| || |||||||| || | |
Sbjct 261130 CCTCCGCGAAGACGAAGAACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAC 261071
Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619
| || |||||||||||||||| || || | || |||||||||||||| ||
Sbjct 261070 AGAGTACGTCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGA 261011
Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679
| || ||||||||| || || ||||| | | ||||| || | || ||| |
Sbjct 261010 ATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAAGGCTCGACC 260951
Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|||| || ||||| || || || || || ||||| |||||||||||
Sbjct 260950 TCGAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAAATCTGCAT 260904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421201954681592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |