Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq8899 105 6e-18 seq9240 98.7 8e-16 seq9325 95.1 1e-14 >seq8899 Length=3132144 Score = 105 bits (116), Expect = 6e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582 ||||| || |||||| ||||||||||| || | || || || | ||||||||||| Sbjct 384477 TGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCGA-AAGCGTACGGCCATCCTCCAGCTG 384535 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||||||| || | || | |||||| ||||| ||| | | |||||| ||| |||||| Sbjct 384536 CTTACCGGCGAAGATCAGACGCTGTTGATCTGGCGGAATTCCTTCCTTATCCTGAATTTT 384595 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 | ||| | | | | || || || | | ||| ||| | || ||||| || || || Sbjct 384596 CGCCTTCACATTCTCGATCGTGTCCGACGGCTCGACCTCAAGGGTGATGGTCTTGCCAGT 384655 Query 48703 GAGAGTTTTCACAAAAATCTGCATC 48727 ||| |||||||| |||||||||||| Sbjct 384656 GAGGGTTTTCACGAAAATCTGCATC 384680 >seq9240 Length=943838 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| | ||| || || |||||| ||||||||||| || | || || | ||||| Sbjct 630374 CACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGTCCATCCTC 630433 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 ||||||||| ||| || | || | ||||||||| ||| ||| | | ||||||||| Sbjct 630434 CAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 630493 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || ||| ||| | | | | || ||||| | | ||| ||| | || ||||| || Sbjct 630494 GATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTT 630553 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCATCGTG 48730 ||| ||||| ||||| || || ||||||||| || Sbjct 630554 ACCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 630587 >seq9325 Length=2359367 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 |||||||| | | | || || ||||| || ||||| || |||||||| || | | Sbjct 261130 CCTCCGCGAAGACGAAGAACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAC 261071 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 | || |||||||||||||||| || || | || |||||||||||||| || Sbjct 261070 AGAGTACGTCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGA 261011 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | || ||||||||| || || ||||| | | ||||| || | || ||| | Sbjct 261010 ATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAAGGCTCGACC 260951 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 |||| || ||||| || || || || || ||||| ||||||||||| Sbjct 260950 TCGAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAAATCTGCAT 260904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421201954681592