Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq9135 149 7e-31 >seq9135 Length=816509 Score = 149 bits (164), Expect = 7e-31 Identities = 270/394 (69%), Gaps = 16/394 (4%) Strand=Plus/Minus Query 164722 TTACATGTTATTGTTTTTGATGAGATAGATGCTCTTTGCAAAAAACGTGG------TG-- 164773 || ||| ||||| |||||||||| ||||| ||| |||||||| |||||| || Sbjct 24057 TTGCATATTATTATTTTTGATGAAATAGACGCTATTTGCAAAGCACGTGGAACAGTTGGA 23998 Query 164774 ----ATAATATTATTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTA 164829 || | | | |||||| | || || ||||| ||| | | ||||| |||||||| Sbjct 23997 GGCAATTCTGGTGTACATGATACTGTTGTCAATCAATTGTTAGCAAAAATTGATGGTGTC 23938 Query 164830 GAATCCTTAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGAT 164889 ||| || ||||| ||| | | | |||||||| ||| ||| ||| | |||||||| Sbjct 23937 GAACAATTGAATAACATTCTGGTGATTGGTATGACGAACAGACGAGATATGATTGATGAA 23878 Query 164890 GCTTTATTACGACCTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAA 164949 || ||||| || || ||||| || ||| | |||| ||||| | ||||| || |||| Sbjct 23877 GCATTATTGCGGCCAGGTCGTTTGGAAGTTCAAATGGAAATCAGCCTACCCAACGAAGAT 23818 Query 164950 GGACGCCTTCAAATTTTAAAAGTTCATGTGGCTAAAATGAAATCCTGTGATATATTATCT 165009 || || | || ||| | || | ||| | |||||| | | | | | || || Sbjct 23817 GGCCGTATACAGATTCTTCAAATCCATACTCGTCGAATGAAGGAATTTAAAAAACTAGCT 23758 Query 165010 CCCGATGTAGATTTAAATAAAATAGCTGCCGAA--ACTAAAAATTATAGTGGTGCTGAAT 165067 || ||||| |||||| || | | || || |||||||| | |||||| |||||| Sbjct 23757 CCGGATGTTGATTTACGCGAATTGG--GCGTAATGACTAAAAACTTTAGTGGCGCTGAAC 23700 Query 165068 TAGAGGGATTAGTAAGAGCCGCTCAATCAACCGC 165101 |||| || ||||| | ||||||||||| || || Sbjct 23699 TAGAAGGTTTAGTTCGTGCCGCTCAATCTACTGC 23666 Score = 109 bits (120), Expect = 7e-19 Identities = 212/309 (69%), Gaps = 8/309 (3%) Strand=Plus/Minus Query 164395 TGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGA 164454 ||| |||| | | ||||||| | |||||||||||||| ||||| | || || || Sbjct 24449 TGGGATTTCGGACGAATGGGAATCGGTGGACTAGATCGTGAATTCAATGCCATCTTTCGA 24390 Query 164455 CGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACAT 164514 || || |||||||| | |||| ||| || | | || | || || |||||| Sbjct 24389 CGTGCTTTTGCTTCACGTGTCTTTCCGCCAGAAGTAGTTGAGCAACTTGGATGCAAACAT 24330 Query 164515 ATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGC 164574 | ||||| ||| || | |||| ||||| ||| ||||||||| || ||||| || Sbjct 24329 GTGAAAGGTATTCTACTTTATGGCCCTCCCGGTACCGGTAAAACGTTGATGGCGCGTCAA 24270 Query 164575 ATTGCT-CAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTAATGGTCCTGAATTATT 164630 |||| | ||| | || ||| || || || || ||||| || |||||| | | || Sbjct 24269 ATTGGTACAA--TGTTGAATGCACGAGAACC--CAAGATTGTCAACGGTCCTCAGATTTT 24214 Query 164631 GAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGA 164690 | |||||||||| || || |||||||| |||||| | | ||| || |||||||| Sbjct 24213 GGACAAATATGTTGGGGAATCAGAAGCGAATGTTCGTCGACTATTTGCTGATGCTGAAGA 24154 Query 164691 AGAACAAAA 164699 ||| |||| Sbjct 24153 GGAAGAAAA 24145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595800554947200