Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq9135 149 7e-31
>seq9135
Length=816509
Score = 149 bits (164), Expect = 7e-31
Identities = 270/394 (69%), Gaps = 16/394 (4%)
Strand=Plus/Minus
Query 164722 TTACATGTTATTGTTTTTGATGAGATAGATGCTCTTTGCAAAAAACGTGG------TG-- 164773
|| ||| ||||| |||||||||| ||||| ||| |||||||| |||||| ||
Sbjct 24057 TTGCATATTATTATTTTTGATGAAATAGACGCTATTTGCAAAGCACGTGGAACAGTTGGA 23998
Query 164774 ----ATAATATTATTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTA 164829
|| | | | |||||| | || || ||||| ||| | | ||||| ||||||||
Sbjct 23997 GGCAATTCTGGTGTACATGATACTGTTGTCAATCAATTGTTAGCAAAAATTGATGGTGTC 23938
Query 164830 GAATCCTTAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGAT 164889
||| || ||||| ||| | | | |||||||| ||| ||| ||| | ||||||||
Sbjct 23937 GAACAATTGAATAACATTCTGGTGATTGGTATGACGAACAGACGAGATATGATTGATGAA 23878
Query 164890 GCTTTATTACGACCTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAA 164949
|| ||||| || || ||||| || ||| | |||| ||||| | ||||| || ||||
Sbjct 23877 GCATTATTGCGGCCAGGTCGTTTGGAAGTTCAAATGGAAATCAGCCTACCCAACGAAGAT 23818
Query 164950 GGACGCCTTCAAATTTTAAAAGTTCATGTGGCTAAAATGAAATCCTGTGATATATTATCT 165009
|| || | || ||| | || | ||| | |||||| | | | | | || ||
Sbjct 23817 GGCCGTATACAGATTCTTCAAATCCATACTCGTCGAATGAAGGAATTTAAAAAACTAGCT 23758
Query 165010 CCCGATGTAGATTTAAATAAAATAGCTGCCGAA--ACTAAAAATTATAGTGGTGCTGAAT 165067
|| ||||| |||||| || | | || || |||||||| | |||||| ||||||
Sbjct 23757 CCGGATGTTGATTTACGCGAATTGG--GCGTAATGACTAAAAACTTTAGTGGCGCTGAAC 23700
Query 165068 TAGAGGGATTAGTAAGAGCCGCTCAATCAACCGC 165101
|||| || ||||| | ||||||||||| || ||
Sbjct 23699 TAGAAGGTTTAGTTCGTGCCGCTCAATCTACTGC 23666
Score = 109 bits (120), Expect = 7e-19
Identities = 212/309 (69%), Gaps = 8/309 (3%)
Strand=Plus/Minus
Query 164395 TGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGA 164454
||| |||| | | ||||||| | |||||||||||||| ||||| | || || ||
Sbjct 24449 TGGGATTTCGGACGAATGGGAATCGGTGGACTAGATCGTGAATTCAATGCCATCTTTCGA 24390
Query 164455 CGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACAT 164514
|| || |||||||| | |||| ||| || | | || | || || ||||||
Sbjct 24389 CGTGCTTTTGCTTCACGTGTCTTTCCGCCAGAAGTAGTTGAGCAACTTGGATGCAAACAT 24330
Query 164515 ATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGC 164574
| ||||| ||| || | |||| ||||| ||| ||||||||| || ||||| ||
Sbjct 24329 GTGAAAGGTATTCTACTTTATGGCCCTCCCGGTACCGGTAAAACGTTGATGGCGCGTCAA 24270
Query 164575 ATTGCT-CAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTAATGGTCCTGAATTATT 164630
|||| | ||| | || ||| || || || || ||||| || |||||| | | ||
Sbjct 24269 ATTGGTACAA--TGTTGAATGCACGAGAACC--CAAGATTGTCAACGGTCCTCAGATTTT 24214
Query 164631 GAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGA 164690
| |||||||||| || || |||||||| |||||| | | ||| || ||||||||
Sbjct 24213 GGACAAATATGTTGGGGAATCAGAAGCGAATGTTCGTCGACTATTTGCTGATGCTGAAGA 24154
Query 164691 AGAACAAAA 164699
||| ||||
Sbjct 24153 GGAAGAAAA 24145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595800554947200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |