Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2222 152 8e-33 >seq2222 Length=23428 Score = 152 bits (168), Expect = 8e-33 Identities = 179/242 (74%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||| | ||||| ||||| ||||| |||||||| |||||||||||| Sbjct 20329 GCAAAGCGTCATCGAAAGGTGCTTCGTGATAATATCCAGGGAATCACGAAGCCAGCTATC 20388 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || || || ||||||||||||||||| |||||| | || ||||| | ||||| || | Sbjct 20389 CGACGCCTTGCTCGTCGTGGTGGAGTAAAGCGTATTTCCGGATTAATTTATGAGGAAACC 20448 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || |||| | ||||| | | |||||| | |||||| | || ||||| Sbjct 20449 CGTGGCGTACTGAAAGTTTTCCTGGAAAACGTTATTCGTGATGCCGTAACTTACACCGAA 20508 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || | ||||| ||||| | |||||| | || || || ||||| || || || Sbjct 20509 CACGCCAAGAGAAAGACCGTCACGGCTATGGATGTAGTGTACGCCTTGAAGCGGCAGGGA 20568 Query 16673 CG 16674 || Sbjct 20569 CG 20570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79066429967256