Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq9254 100 5e-16 >seq9254 Length=4138565 Score = 100 bits (110), Expect = 5e-16 Identities = 342/528 (65%), Gaps = 14/528 (3%) Strand=Plus/Minus Query 193647 GAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGTAT 193706 || || ||||| || | ||| ||||||||||| ||| ||||||| || || || || Sbjct 2756813 GAAATTTATAACCTGGCTGCCCAAAGTCATGTGAAAATTTCCTTCGATTTGAGCGAATAC 2756754 Query 193707 ACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGGGA 193766 || | | || ||||| | ||||| || | | || || || | || | |||| Sbjct 2756753 ACGGCCGAGGTGGATGCGGTCGGAACACTGCGCTTGCTGGACGCCATCCGCACCGTGGGG 2756694 Query 193767 ATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGTTCTA 193826 |||| || ||||| |||| |||||||| || || || || || || | Sbjct 2756693 TTGGAAAAGTCGGTTCGATTCTACCAGGCATCCACTTCGGAGCTTTACGGCAAGGTGGTG 2756634 Query 193827 GGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGCAAAG 193886 | || |||| |||| ||||| || |||| || || || || | | || ||| Sbjct 2756633 GAAACGCCACAGAATGAAAAAACACCCTTCTATCCGCGTTCGCCGTACGCTTGTGCCAAG 2756574 Query 193887 TTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATG----GATTCCACGCTAG 193942 |||| || || ||||| | | ||||| || || | || | | || | || | Sbjct 2756573 ATGTACGGCTACTGGATTGTGATAAATTACCGCGAAGCGTACGACATGTTTGCCTGCAA- 2756515 Query 193943 TTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAA 194002 ||| ||||| || || ||||| ||||| | | || |||| ||||| || || || Sbjct 2756514 ---TGGCATTCTTTTTAACCACGAGTCTCCGCGGCGGGGAGAGAATTTTGTCACCCGCAA 2756458 Query 194003 GATTACACAAGGT--TTATCTAAGATCTCTGTTGGATTACAGAAGATTCTT-TATCTTGG 194059 ||| || | ||| | | || ||||| |||| ||| || | ||| | || || Sbjct 2756457 GATAACCC--GGTCAGTGGCGAAAATCTCGCTTGGCCAGCAGGAG-TGCTTGGAGCTGGG 2756401 Query 194060 TAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTT 194119 |||||| | | ||| | || ||||| || || || || || || || || |||||| | Sbjct 2756400 CAATCTTGACTCCAAGCGTGACTGGGGGCATGCCAAAGACTACGTGGAGGCCATGTGGCT 2756341 Query 194120 AATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGA 194167 |||| |||| ||||| |||| || |||| ||| || || || || || Sbjct 2756340 AATGATGCAGCAGGACAAACCGGAAGATTTTGTCATCGCCACTGGGGA 2756293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807458374131520