Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq9239 147 2e-30
seq9207 113 4e-20
>seq9239
Length=1433044
Score = 147 bits (162), Expect = 2e-30
Identities = 215/304 (71%), Gaps = 0/304 (0%)
Strand=Plus/Minus
Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729
||||||| || || || ||||| || || |||| ||| | || ||||| || || |
Sbjct 683545 AAACGCACGACGATCTGTGGAACGCCGCCCAGCTGCAGATGGTGAAGGAGGGCAAGATGC 683486
Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGC 71789
| |||| ||| || ||||||||||| || ||||| |||||||||| |||| ||||||
Sbjct 683485 ATGGATTCCTGCGGATGTACTGGGCGAAGAAGATACTCGAGTGGAGCAAAACGCCCGAGG 683426
Query 71790 AGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTA 71849
| ||||||||| | || || || |||||| | ||||| || || || ||||| || |
Sbjct 683425 AAGCGCTCGAGGCGGCGATCTACCTGAACGATCGTTACAGCCTAGATGGGCGCGACCCGA 683366
Query 71850 ACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGATAGAAGCTTTTTAGAAC 71909
|||| || ||||||||||||||| || || |||||||| | | ||||
Sbjct 683365 ACGGGTACGTCGGTTGCATGTGGTCGATCGCTGGAATTCACGATCAGGGATGGAAGGAAC 683306
Query 71910 GTCAAGTGTTTGGTAAAATTCGCTATATGAATCGTAATGGTTGCGAACGCAAGTTCAATG 71969
| | | || |||||||| | || ||||| | ||||| || | |||||| |||
Sbjct 683305 GGGACATCTTCGGTAAAATAAGATACATGAACTACGAAGGTTGTAAAAGGAAGTTCGATG 683246
Query 71970 TGAA 71973
||||
Sbjct 683245 TGAA 683242
>seq9207
Length=1443628
Score = 113 bits (124), Expect = 4e-20
Identities = 351/535 (66%), Gaps = 14/535 (3%)
Strand=Plus/Minus
Query 147113 CACGGTGAATTGAATCGTGTTTGCTGCGGGTTTGGTTCTCAAATAGTACATGCCCGTTTT 147172
||| || || || |||| ||| | || || ||||| | || ||||||||||||||| ||
Sbjct 1179159 CACCGTAAACTGGATCGCGTTCACGGCCGGCTTGGTGCGCAGATAGTACATGCCCGTCTT 1179100
Query 147173 TAAACCCTTTTCCCAAGAATAGTCGTGAATGGATGATAAAACTTTA--TAGGTTGGATTG 147230
| ||| | | ||| ||| |||||| || | | ||| ||| | || | |
Sbjct 1179099 CAGGCCCATCTTCCAGCCGTAGAAGTGAATCGACGTCAG--CTTGCCGTAGTTCGGTTCG 1179042
Query 147231 GCCACAAAAAGATTGAGCGATTGGCTCTGATCGATGTAAGGTCCCCGCTCTGCGGCCATG 147290
||||| || |||| ||| ||| |||||||||| | | ||||| || ||||||||
Sbjct 1179041 GCCACGTGAATGTTGAACGACTGGGACTGATCGATGAACGCACCCCGGTCCGCGGCCATT 1178982
Query 147291 TCCAA-CACTACTTTTTGTTTA-ATTTCCCAAGCGGTCTTGAAGAGCGCCTTGATATTGT 147348
| | ||| |||| | || ||||| | |||||| | || | ||| | |
Sbjct 1178981 TTGATGCACG--TTTTCACCGATATCTCCCACACCGTCTTGTACAGGTCGCGGATGTGCT 1178924
Query 147349 GTGGAATTTCATCAATATTTTGTACAGATCCGTTGTTTTTAATAATTTTTATCATGATAT 147408
| |||||||| || || |||| || ||||||| || |||| || | ||||
Sbjct 1178923 GCGGAATTTCCTCGATCCGCTGTATCGAACCGTTGTGCGCAAGGATTTGGTTCTTCATAT 1178864
Query 147409 CTGTCGAAT---ATACGTTGGTGTCTACGAGTTTATCGACGAGATGCTGATTGACCACTT 147465
| ||| || | | | | || || | | | ||||| || |||||||| |
Sbjct 1178863 C-GTC--ATCCCACAGGCCGAGTTCGGTCAGATCCTGCAGCAGATGGTGGTTGACCACCT 1178807
Query 147466 GATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAACGACT 147525
| ||||||||||||| || | || ||| | || ||| |||||||||||||||
Sbjct 1178806 GGAACTCGCCCGACAGCACGCGCCGATTGTAGACGTTCGAAGTGTACGGCTCGAACGACT 1178747
Query 147526 CGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAGCAATCAATAATGAAT 147585
||||||| || ||||| || || || | || |||||||| || | || | ||||
Sbjct 1178746 CGTTGTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGCATCGGTGCCAGCAGGAGCGAAT 1178687
Query 147586 TGCGTAAGCCGTGCATAGCCATTTCTCGCTTAAGCTCGTCCCAGTTCCAAAGATC 147640
| || | || ||| | || || | | ||| |||||| |||||||||| || ||
Sbjct 1178686 TCCGGATACCATGCTTGGCAATCTTTTCCTTCAGCTCGGCCCAGTTCCACAGGTC 1178632
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478605008378240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |