Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq9239 147 2e-30 seq9207 113 4e-20 >seq9239 Length=1433044 Score = 147 bits (162), Expect = 2e-30 Identities = 215/304 (71%), Gaps = 0/304 (0%) Strand=Plus/Minus Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729 ||||||| || || || ||||| || || |||| ||| | || ||||| || || | Sbjct 683545 AAACGCACGACGATCTGTGGAACGCCGCCCAGCTGCAGATGGTGAAGGAGGGCAAGATGC 683486 Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGC 71789 | |||| ||| || ||||||||||| || ||||| |||||||||| |||| |||||| Sbjct 683485 ATGGATTCCTGCGGATGTACTGGGCGAAGAAGATACTCGAGTGGAGCAAAACGCCCGAGG 683426 Query 71790 AGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTA 71849 | ||||||||| | || || || |||||| | ||||| || || || ||||| || | Sbjct 683425 AAGCGCTCGAGGCGGCGATCTACCTGAACGATCGTTACAGCCTAGATGGGCGCGACCCGA 683366 Query 71850 ACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGATAGAAGCTTTTTAGAAC 71909 |||| || ||||||||||||||| || || |||||||| | | |||| Sbjct 683365 ACGGGTACGTCGGTTGCATGTGGTCGATCGCTGGAATTCACGATCAGGGATGGAAGGAAC 683306 Query 71910 GTCAAGTGTTTGGTAAAATTCGCTATATGAATCGTAATGGTTGCGAACGCAAGTTCAATG 71969 | | | || |||||||| | || ||||| | ||||| || | |||||| ||| Sbjct 683305 GGGACATCTTCGGTAAAATAAGATACATGAACTACGAAGGTTGTAAAAGGAAGTTCGATG 683246 Query 71970 TGAA 71973 |||| Sbjct 683245 TGAA 683242 >seq9207 Length=1443628 Score = 113 bits (124), Expect = 4e-20 Identities = 351/535 (66%), Gaps = 14/535 (3%) Strand=Plus/Minus Query 147113 CACGGTGAATTGAATCGTGTTTGCTGCGGGTTTGGTTCTCAAATAGTACATGCCCGTTTT 147172 ||| || || || |||| ||| | || || ||||| | || ||||||||||||||| || Sbjct 1179159 CACCGTAAACTGGATCGCGTTCACGGCCGGCTTGGTGCGCAGATAGTACATGCCCGTCTT 1179100 Query 147173 TAAACCCTTTTCCCAAGAATAGTCGTGAATGGATGATAAAACTTTA--TAGGTTGGATTG 147230 | ||| | | ||| ||| |||||| || | | ||| ||| | || | | Sbjct 1179099 CAGGCCCATCTTCCAGCCGTAGAAGTGAATCGACGTCAG--CTTGCCGTAGTTCGGTTCG 1179042 Query 147231 GCCACAAAAAGATTGAGCGATTGGCTCTGATCGATGTAAGGTCCCCGCTCTGCGGCCATG 147290 ||||| || |||| ||| ||| |||||||||| | | ||||| || |||||||| Sbjct 1179041 GCCACGTGAATGTTGAACGACTGGGACTGATCGATGAACGCACCCCGGTCCGCGGCCATT 1178982 Query 147291 TCCAA-CACTACTTTTTGTTTA-ATTTCCCAAGCGGTCTTGAAGAGCGCCTTGATATTGT 147348 | | ||| |||| | || ||||| | |||||| | || | ||| | | Sbjct 1178981 TTGATGCACG--TTTTCACCGATATCTCCCACACCGTCTTGTACAGGTCGCGGATGTGCT 1178924 Query 147349 GTGGAATTTCATCAATATTTTGTACAGATCCGTTGTTTTTAATAATTTTTATCATGATAT 147408 | |||||||| || || |||| || ||||||| || |||| || | |||| Sbjct 1178923 GCGGAATTTCCTCGATCCGCTGTATCGAACCGTTGTGCGCAAGGATTTGGTTCTTCATAT 1178864 Query 147409 CTGTCGAAT---ATACGTTGGTGTCTACGAGTTTATCGACGAGATGCTGATTGACCACTT 147465 | ||| || | | | | || || | | | ||||| || |||||||| | Sbjct 1178863 C-GTC--ATCCCACAGGCCGAGTTCGGTCAGATCCTGCAGCAGATGGTGGTTGACCACCT 1178807 Query 147466 GATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAACGACT 147525 | ||||||||||||| || | || ||| | || ||| ||||||||||||||| Sbjct 1178806 GGAACTCGCCCGACAGCACGCGCCGATTGTAGACGTTCGAAGTGTACGGCTCGAACGACT 1178747 Query 147526 CGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAGCAATCAATAATGAAT 147585 ||||||| || ||||| || || || | || |||||||| || | || | |||| Sbjct 1178746 CGTTGTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGCATCGGTGCCAGCAGGAGCGAAT 1178687 Query 147586 TGCGTAAGCCGTGCATAGCCATTTCTCGCTTAAGCTCGTCCCAGTTCCAAAGATC 147640 | || | || ||| | || || | | ||| |||||| |||||||||| || || Sbjct 1178686 TCCGGATACCATGCTTGGCAATCTTTTCCTTCAGCTCGGCCCAGTTCCACAGGTC 1178632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478605008378240