Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 277 5e-69
seq9041 96.9 9e-15
>seq9207
Length=1443628
Score = 277 bits (306), Expect = 5e-69
Identities = 1127/1751 (64%), Gaps = 45/1751 (3%)
Strand=Plus/Plus
Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489
||||| || | || || ||||| |||||||| ||| | ||||| ||||| || || |||
Sbjct 1177378 ATCAAGGGCAAGATCGTCGAACGACCGCAGCACATGCTGATGCGCGTTGCCATCGGGATC 1177437
Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTC 363549
|| || ||| | ||||| || || ||||| || || | || | || ||
Sbjct 1177438 CACGGCGAGGACATCGATGCGGCAATCGAAACGTACAATTTGCTTTCGGAGCGATACTTT 1177497
Query 363550 ACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGC 363609
||||||||| |||| || |||| || | || | || || |||| || |||
Sbjct 1177498 ACGCACGCCTCGCCGACCATGTTTGCGGCGGCCACGCAGCGGCCCCAACTGTCGTCCTGC 1177557
Query 363610 TTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGT 363669
||||| |||| ||| |||||| |||||||| || | ||||| || ||| | ||
Sbjct 1177558 TTTCTCCTAACGATGTCGGACGACAGTATCGAGGGAATTTACGACACGCTGAAGCAGTGC 1177617
Query 363670 GCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGCACA 363728
|| || || |||||| || || || |||||| | | || | ||| | || || |
Sbjct 1177618 GCACTGATCTCCAAGTCCGCCGGAGGCATTGGTCTGAACG-TGCACTGCATCCGGGCGAA 1177676
Query 363729 GAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTG 363787
| | |||||| ||||| | || || ||| || ||| ||||||| ||||| ||||
Sbjct 1177677 GGGTACGTACATTGCGGGCACGAACGGTAT-CTCCAACGGGTTGGTTCCGATGCTGCGTG 1177735
Query 363788 TGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTG 363847
| | |||| || || |||| || |||||||| || ||||| || ||||| |
Sbjct 1177736 TCTACAACAACACGGCCCGGTATGTGGACCAGGGCGGCAACAAGCGTCCCGGTGCGTTCG 1177795
Query 363848 CTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACA 363907
| || || |||||||| |||| |||| | ||||||||||| || || ||||||||
Sbjct 1177796 CCATCTACCTCGAGCCGTGGCATGGCGATGTGTTTGAGTTTCTCGATCTGAAGAAAAACA 1177855
Query 363908 CGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATT 363967
| || || ||||| | ||||| ||||| ||||||| || || ||||| | || | |
Sbjct 1177856 CTGGCAAGGAGGAGGTCCGTGCGCGTGACATGTTCTACGCGCTGTGGGTGCCGGATCTGT 1177915
Query 363968 TTATGAAGCGCGTGGAGGCAGGTAAGAA--TTGGTCACTCTTTTGCCCACACGAATGTCC 364025
| |||||||| |||||||| | | ||| ||| || | || || ||||| || ||
Sbjct 1177916 TCATGAAGCGGGTGGAGGC--GAACGAAATGTGGAGCCTTATGTGTCCGCACGACTGCCC 1177973
Query 364026 AGGTCTTTCCGATGTATGGGGTGACGACTAT--GTTGCTCTATACGAAAAGTATGAATCG 364083
|| || || || ||||| || || | | | ||| || ||| || || |
Sbjct 1177974 CGGGCTGTCGGAGTCGTGGGGCGAAGAGTTTGAGCGGCTGTACACG--GGCTACGAGAAG 1178031
Query 364084 GAGGGAAAGGCTCGTAAGACA-ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTC 364142
|| || || || | | || | || ||| | || ||||| || ||||| || ||
Sbjct 1178032 GAAGG-TCGGTTCATCCGGCAGGTGAAGGCGCAGGATCTGTGGTTCGCGATCATCGAGTC 1178090
Query 364143 GCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAA 364202
|||| | ||||| || || || ||| | ||||| ||| |||||||||| ||| |||
Sbjct 1178091 GCAGGTCGAGACGGGCGTGCCGTACATGCTCTACAAGGATGCGTGCAACCGGAAGAGCAA 1178150
Query 364203 CCAGCAGCACCTTGGTACAATTCAGCAGAGC---AACCTATGTACCGAGATTATTGAATA 364259
||||||| || | || || | ||| || || ||||| || || ||||| | || ||
Sbjct 1178151 CCAGCAGAACGTGGGCACGA-TCA--AGTGCTCGAACCTGTGCACGGAGATCGTCGAGTA 1178207
Query 364260 CACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319
| | | ||||| | ||| || || || || |||||||| ||||| ||||||
Sbjct 1178208 CTCGTCGAAGGACGAAATTGCGGTGTGCAATCTGGCGTCGATTGCGCTGAACATGTTTGT 1178267
Query 364320 AA---AAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTG 364376
| ||| | || | ||| | | | || | || || || | | || |
Sbjct 1178268 GAGGCCGGATCGCACGTACGACTTCGTGAAGCTGAAGGAGGTCGCCAAGATCGTCACGCG 1178327
Query 364377 CAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAA 364436
||| || |||| | ||||||| || || || || | || || || ||||||| ||
Sbjct 1178328 CAACCTGAACAAAATCATCGACATCAACTACTACCCGGTGCCGGAGGCGAAGCGTTCCAA 1178387
Query 364437 TATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGA--CGTT-TTTATGAT 364493
||||| || || || || ||| | || || ||||| | || || |||| || | ||
Sbjct 1178388 CATGCGCCACCGACCTATCGGTATCGGCGTGCAGGGAATGGCCGATGCGTTCATTCTCAT 1178447
Query 364494 GCTCAA---GATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGA 364550
|| | | | | | ||| || || | || || || ||||||||||
Sbjct 1178448 GCGCCATCCGTACGAAAGTGA------GGAAGCACAAAAGCTGAACCAGCAGATCTTTGA 1178501
Query 364551 AACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTA 364610
|| || || | || ||| || ||| ||||| ||||| | | || |||
Sbjct 1178502 GACCATCTACTATGGCGCTCTGGAGGCTAGCTGTGAGTTGGCCGCCCGCGACGGTCCGTA 1178561
Query 364611 CTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGT 364670
| || || ||||| | || | |||||| | |||| || | ||| |
Sbjct 1178562 CGAAACGTACGAGGGCTGTCCGGTGAGCAAGGGAATCCTGCAGTACGACATGTGGGAGAA 1178621
Query 364671 CACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTAC 364730
|| ||| | | || |||||||||| ||| || || ||||||||||
Sbjct 1178622 GACCCCAACGGACCTGTGGAACTGGGCCGAGCTGAAGGAAAAGATTGCCAAGCATGGTAT 1178681
Query 364731 TCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAA 364790
|| || || ||| | || || ||||| || || || || || || || || || ||
Sbjct 1178682 CCGGAATTCGCTCCTGCTGGCACCGATGCCGACCGCCTCCACGGCCCAAATTCTGGGCAA 1178741
Query 364791 CAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGA 364850
|||||||| ||||| |||| || || | || || || || || || || ||
Sbjct 1178742 CAACGAGTCGTTCGAGCCGTACACTTCGAACGTCTACAATCGGCGCGTGCTGTCGGGCGA 1178801
Query 364851 ATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGA 364910
|| | ||| || || | | || | ||||||| |||| | ||| ||||||| |||
Sbjct 1178802 GTTCCAGGTGGTCAACCACCATCTGCTGCAGGATCTGACCGAACTCGGCCTGTGGGATGA 1178861
Query 364911 CAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGG-ATTTC 364969
| ||||||||| | ||| | || || ||||| | ||| | || ||| | |||
Sbjct 1178862 CGATATGAAGAACCAAATCCTTGCGCACAACGGTTCGATACAGCGGA-TCGAGGAAATTC 1178920
Query 364970 --CAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCAT 365027
||| | ||| | || | ||||| || || ||||| || || || ||| |||
Sbjct 1178921 CGCAGCACATCCGCGACC--TGTACAAGACGGTGTGGGAGATATCGGTGAAAACGTGCAT 1178978
Query 365028 TGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA- 365086
| ||||| || || || ||||| || ||| |||| ||||||||| ||| |||||
Sbjct 1178979 CAAAATGGCCGCGGACCGGGGTGCGTTCATCGATCAGTCCCAGTCGTTCAAC--ATTCAC 1179036
Query 365087 -TGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGT 365145
|| | | || | || || |||||| || || || || |||||||| ||||| ||
Sbjct 1179037 GTGGCCGAACCGAACTACGGCAAGCTGACGTCGATTCACTTCTACGGCTGGAAGATGGGC 1179096
Query 365146 CTTAAGACAGG 365156
|| ||||| ||
Sbjct 1179097 CTGAAGACGGG 1179107
>seq9041
Length=338010
Score = 96.9 bits (106), Expect = 9e-15
Identities = 197/285 (69%), Gaps = 6/285 (2%)
Strand=Plus/Plus
Query 111513 TTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATG-CACGACTCATATGATTCACA 111571
||||||||||| ||||||||||| ||| ||| ||| ||||| ||| || |
Sbjct 58659 TTTCAATGGCGACACTTTGGTGCGAGCTATGGAAC-ATGTCACGATGATTATAATGGTAA 58717
Query 111572 GGGAACTGATCAATTA-CAGAATGTCATTGATCAAATTAAGAACAACCCAACTTCTCGTC 111630
|| | |||||| | | ||| || || || | || |||||||| || |||||
Sbjct 58718 AGGTATTGATCAGCTGGCTGAA-GTAATCGACAAGATAAAGAACAATCCTTACGATCGTC 58776
Query 111631 GCATTATTATGAGTGCATGGAACCCAAATG-CATTGGAAAAAATGGCACTTCCACCATGT 111689
| || || ||||| |||||||| |||| | |||| || | ||||||| || || ||
Sbjct 58777 GAATCATCATGAGCGCATGGAATCCAATCGACATTCCGAACA-TGGCACTACCCCCTTGC 58835
Query 111690 CATCTTATGTGCCAGTTTTATGTACACGACGGGATGCTTTCATGCCAAATGTATCAGCGA 111749
||| | || ||| ||||| ||| || ||| || || ||||| |||||||| ||
Sbjct 58836 CATTGTTTGGCCCAATTTTACGTAGCAGATGGGGAACTGTCCTGCCAGATGTATCAACGG 58895
Query 111750 TCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTAC 111794
|| || || | || || || || || || ||||||||||| |||
Sbjct 58896 TCGGCCGACGTAGGACTAGGAGTACCCTTCAATATTGCAAGCTAC 58940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303193421100944
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |