Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq9207 277 5e-69 seq9041 96.9 9e-15 >seq9207 Length=1443628 Score = 277 bits (306), Expect = 5e-69 Identities = 1127/1751 (64%), Gaps = 45/1751 (3%) Strand=Plus/Plus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 ||||| || | || || ||||| |||||||| ||| | ||||| ||||| || || ||| Sbjct 1177378 ATCAAGGGCAAGATCGTCGAACGACCGCAGCACATGCTGATGCGCGTTGCCATCGGGATC 1177437 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTC 363549 || || ||| | ||||| || || ||||| || || | || | || || Sbjct 1177438 CACGGCGAGGACATCGATGCGGCAATCGAAACGTACAATTTGCTTTCGGAGCGATACTTT 1177497 Query 363550 ACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGC 363609 ||||||||| |||| || |||| || | || | || || |||| || ||| Sbjct 1177498 ACGCACGCCTCGCCGACCATGTTTGCGGCGGCCACGCAGCGGCCCCAACTGTCGTCCTGC 1177557 Query 363610 TTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGT 363669 ||||| |||| ||| |||||| |||||||| || | ||||| || ||| | || Sbjct 1177558 TTTCTCCTAACGATGTCGGACGACAGTATCGAGGGAATTTACGACACGCTGAAGCAGTGC 1177617 Query 363670 GCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGCACA 363728 || || || |||||| || || || |||||| | | || | ||| | || || | Sbjct 1177618 GCACTGATCTCCAAGTCCGCCGGAGGCATTGGTCTGAACG-TGCACTGCATCCGGGCGAA 1177676 Query 363729 GAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTG 363787 | | |||||| ||||| | || || ||| || ||| ||||||| ||||| |||| Sbjct 1177677 GGGTACGTACATTGCGGGCACGAACGGTAT-CTCCAACGGGTTGGTTCCGATGCTGCGTG 1177735 Query 363788 TGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTG 363847 | | |||| || || |||| || |||||||| || ||||| || ||||| | Sbjct 1177736 TCTACAACAACACGGCCCGGTATGTGGACCAGGGCGGCAACAAGCGTCCCGGTGCGTTCG 1177795 Query 363848 CTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACA 363907 | || || |||||||| |||| |||| | ||||||||||| || || |||||||| Sbjct 1177796 CCATCTACCTCGAGCCGTGGCATGGCGATGTGTTTGAGTTTCTCGATCTGAAGAAAAACA 1177855 Query 363908 CGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATT 363967 | || || ||||| | ||||| ||||| ||||||| || || ||||| | || | | Sbjct 1177856 CTGGCAAGGAGGAGGTCCGTGCGCGTGACATGTTCTACGCGCTGTGGGTGCCGGATCTGT 1177915 Query 363968 TTATGAAGCGCGTGGAGGCAGGTAAGAA--TTGGTCACTCTTTTGCCCACACGAATGTCC 364025 | |||||||| |||||||| | | ||| ||| || | || || ||||| || || Sbjct 1177916 TCATGAAGCGGGTGGAGGC--GAACGAAATGTGGAGCCTTATGTGTCCGCACGACTGCCC 1177973 Query 364026 AGGTCTTTCCGATGTATGGGGTGACGACTAT--GTTGCTCTATACGAAAAGTATGAATCG 364083 || || || || ||||| || || | | | ||| || ||| || || | Sbjct 1177974 CGGGCTGTCGGAGTCGTGGGGCGAAGAGTTTGAGCGGCTGTACACG--GGCTACGAGAAG 1178031 Query 364084 GAGGGAAAGGCTCGTAAGACA-ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTC 364142 || || || || | | || | || ||| | || ||||| || ||||| || || Sbjct 1178032 GAAGG-TCGGTTCATCCGGCAGGTGAAGGCGCAGGATCTGTGGTTCGCGATCATCGAGTC 1178090 Query 364143 GCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAA 364202 |||| | ||||| || || || ||| | ||||| ||| |||||||||| ||| ||| Sbjct 1178091 GCAGGTCGAGACGGGCGTGCCGTACATGCTCTACAAGGATGCGTGCAACCGGAAGAGCAA 1178150 Query 364203 CCAGCAGCACCTTGGTACAATTCAGCAGAGC---AACCTATGTACCGAGATTATTGAATA 364259 ||||||| || | || || | ||| || || ||||| || || ||||| | || || Sbjct 1178151 CCAGCAGAACGTGGGCACGA-TCA--AGTGCTCGAACCTGTGCACGGAGATCGTCGAGTA 1178207 Query 364260 CACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 | | | ||||| | ||| || || || || |||||||| ||||| |||||| Sbjct 1178208 CTCGTCGAAGGACGAAATTGCGGTGTGCAATCTGGCGTCGATTGCGCTGAACATGTTTGT 1178267 Query 364320 AA---AAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTG 364376 | ||| | || | ||| | | | || | || || || | | || | Sbjct 1178268 GAGGCCGGATCGCACGTACGACTTCGTGAAGCTGAAGGAGGTCGCCAAGATCGTCACGCG 1178327 Query 364377 CAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAA 364436 ||| || |||| | ||||||| || || || || | || || || ||||||| || Sbjct 1178328 CAACCTGAACAAAATCATCGACATCAACTACTACCCGGTGCCGGAGGCGAAGCGTTCCAA 1178387 Query 364437 TATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGA--CGTT-TTTATGAT 364493 ||||| || || || || ||| | || || ||||| | || || |||| || | || Sbjct 1178388 CATGCGCCACCGACCTATCGGTATCGGCGTGCAGGGAATGGCCGATGCGTTCATTCTCAT 1178447 Query 364494 GCTCAA---GATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGA 364550 || | | | | | ||| || || | || || || |||||||||| Sbjct 1178448 GCGCCATCCGTACGAAAGTGA------GGAAGCACAAAAGCTGAACCAGCAGATCTTTGA 1178501 Query 364551 AACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTA 364610 || || || | || ||| || ||| ||||| ||||| | | || ||| Sbjct 1178502 GACCATCTACTATGGCGCTCTGGAGGCTAGCTGTGAGTTGGCCGCCCGCGACGGTCCGTA 1178561 Query 364611 CTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGT 364670 | || || ||||| | || | |||||| | |||| || | ||| | Sbjct 1178562 CGAAACGTACGAGGGCTGTCCGGTGAGCAAGGGAATCCTGCAGTACGACATGTGGGAGAA 1178621 Query 364671 CACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTAC 364730 || ||| | | || |||||||||| ||| || || |||||||||| Sbjct 1178622 GACCCCAACGGACCTGTGGAACTGGGCCGAGCTGAAGGAAAAGATTGCCAAGCATGGTAT 1178681 Query 364731 TCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAA 364790 || || || ||| | || || ||||| || || || || || || || || || || Sbjct 1178682 CCGGAATTCGCTCCTGCTGGCACCGATGCCGACCGCCTCCACGGCCCAAATTCTGGGCAA 1178741 Query 364791 CAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGA 364850 |||||||| ||||| |||| || || | || || || || || || || || Sbjct 1178742 CAACGAGTCGTTCGAGCCGTACACTTCGAACGTCTACAATCGGCGCGTGCTGTCGGGCGA 1178801 Query 364851 ATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGA 364910 || | ||| || || | | || | ||||||| |||| | ||| ||||||| ||| Sbjct 1178802 GTTCCAGGTGGTCAACCACCATCTGCTGCAGGATCTGACCGAACTCGGCCTGTGGGATGA 1178861 Query 364911 CAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGG-ATTTC 364969 | ||||||||| | ||| | || || ||||| | ||| | || ||| | ||| Sbjct 1178862 CGATATGAAGAACCAAATCCTTGCGCACAACGGTTCGATACAGCGGA-TCGAGGAAATTC 1178920 Query 364970 --CAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCAT 365027 ||| | ||| | || | ||||| || || ||||| || || || ||| ||| Sbjct 1178921 CGCAGCACATCCGCGACC--TGTACAAGACGGTGTGGGAGATATCGGTGAAAACGTGCAT 1178978 Query 365028 TGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA- 365086 | ||||| || || || ||||| || ||| |||| ||||||||| ||| ||||| Sbjct 1178979 CAAAATGGCCGCGGACCGGGGTGCGTTCATCGATCAGTCCCAGTCGTTCAAC--ATTCAC 1179036 Query 365087 -TGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGT 365145 || | | || | || || |||||| || || || || |||||||| ||||| || Sbjct 1179037 GTGGCCGAACCGAACTACGGCAAGCTGACGTCGATTCACTTCTACGGCTGGAAGATGGGC 1179096 Query 365146 CTTAAGACAGG 365156 || ||||| || Sbjct 1179097 CTGAAGACGGG 1179107 >seq9041 Length=338010 Score = 96.9 bits (106), Expect = 9e-15 Identities = 197/285 (69%), Gaps = 6/285 (2%) Strand=Plus/Plus Query 111513 TTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATG-CACGACTCATATGATTCACA 111571 ||||||||||| ||||||||||| ||| ||| ||| ||||| ||| || | Sbjct 58659 TTTCAATGGCGACACTTTGGTGCGAGCTATGGAAC-ATGTCACGATGATTATAATGGTAA 58717 Query 111572 GGGAACTGATCAATTA-CAGAATGTCATTGATCAAATTAAGAACAACCCAACTTCTCGTC 111630 || | |||||| | | ||| || || || | || |||||||| || ||||| Sbjct 58718 AGGTATTGATCAGCTGGCTGAA-GTAATCGACAAGATAAAGAACAATCCTTACGATCGTC 58776 Query 111631 GCATTATTATGAGTGCATGGAACCCAAATG-CATTGGAAAAAATGGCACTTCCACCATGT 111689 | || || ||||| |||||||| |||| | |||| || | ||||||| || || || Sbjct 58777 GAATCATCATGAGCGCATGGAATCCAATCGACATTCCGAACA-TGGCACTACCCCCTTGC 58835 Query 111690 CATCTTATGTGCCAGTTTTATGTACACGACGGGATGCTTTCATGCCAAATGTATCAGCGA 111749 ||| | || ||| ||||| ||| || ||| || || ||||| |||||||| || Sbjct 58836 CATTGTTTGGCCCAATTTTACGTAGCAGATGGGGAACTGTCCTGCCAGATGTATCAACGG 58895 Query 111750 TCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTAC 111794 || || || | || || || || || || ||||||||||| ||| Sbjct 58896 TCGGCCGACGTAGGACTAGGAGTACCCTTCAATATTGCAAGCTAC 58940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303193421100944