Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq9207 354 8e-93 seq9240 167 2e-36 seq9325 122 8e-23 seq8899 113 4e-20 seq8738 104 2e-17 seq9254 98.7 9e-16 >seq9207 Length=1443628 Score = 354 bits (392), Expect = 8e-93 Identities = 1197/1839 (65%), Gaps = 50/1839 (3%) Strand=Plus/Minus Query 144740 GCTGGCTTGGTGCGCAAATAGTACATGCCCGTTTTGAGTCCCGAGCGCCAAGTGTAGTCG 144799 || ||||||||||||| ||||||||||||||| || || ||| ||| |||| | Sbjct 1179134 GCCGGCTTGGTGCGCAGATAGTACATGCCCGTCTTCAGGCCCATCTTCCAGCCGTAGAAG 1179075 Query 144800 TGTATCGACGTCATCAGAGCGTACGTGGGCTCCGCCACAAACAAATTTAGCGATTGGCTT 144859 || |||||||||| | |||| | || || ||||| | || | ||| ||| Sbjct 1179074 TGAATCGACGTCAGCTTGCCGTAGTTCGGTTCGGCCACGTGAATGTTGAACGACTGGGAC 1179015 Query 144860 TGATCAATGAAAGCGTTGCGGTCGGCGGCCATCTCAATCATACGTTTGCATTTC-ATTTC 144918 ||||| ||||| || ||||| |||||||| | || |||||| || || || Sbjct 1179014 TGATCGATGAACGCACCCCGGTCCGCGGCCATTTTGATGC-ACGTTTTCACCGATATCTC 1178956 Query 144919 CCAAGCGGTCTTGTACAAACGTTTAATGTGGTCCGGAATGCCGTCAATCGCCTGAATCGA 144978 ||| | |||||||||| ||||| | |||||| | || ||| ||| ||||| Sbjct 1178955 CCACACCGTCTTGTACAGGTCGCGGATGTGCTGCGGAATTTCCTCGATCCGCTGTATCGA 1178896 Query 144979 CCCCTTGTGCGCAAATATGGCGTTCCGCATTTCGGACGTGTACAGTTTTAACTTGATCAA 145038 || |||||||||| || |||| ||| ||| |||| | | | ||| Sbjct 1178895 ACCGTTGTGCGCAAGGATTTGGTTCTTCATATCGTCATCCCACAGGCCGAGTTCGGTCAG 1178836 Query 145039 GTCGTCAATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATA 145098 || | | | | || ||||| ||||| |||||||| | || ||| || || || Sbjct 1178835 ATCCTGCAGCAGATGGTGGTTGACCACCTGGAACTCGCCCGACAGCACGCGCCGATTGTA 1178776 Query 145099 CACGTTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGC 145158 ||||| || ||| | || || || |||||||| |||||||| ||||| || || | || Sbjct 1178775 GACGTTCGAAGTGTACGGCTCGAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGAGGC 1178716 Query 145159 GGTGGGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTT 145218 ||| ||||| |||| || | ||||| || | || ||||| || | |||||| Sbjct 1178715 GGTCGGCATCGGTGCCAGCAGGAGCGAATTCCGGATACCATGCTTGGCAATCTTTTCCTT 1178656 Query 145219 TAGCGTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAAT 145278 ||| |||| | ||| || || || || ||||||||||||||||||| || Sbjct 1178655 CAGCTCGGCCCAGTTCCACAGGTCCGTTGGGGTCTTCTCCCACATGTCGTACTGCAGGAT 1178596 Query 145279 GCCCTCGCTGGCGGGGCTGCCTTGAAAGGAACTGTA---ACTGCCCCAAGTTTTGGCGAG 145335 |||| ||| | || | ||| | | | ||| || | | | | ||| | Sbjct 1178595 TCCCTTGCTCACCGGACAGCCCTCGTACGTTTCGTACGGACCGTCGCGGGC---GGCCAA 1178539 Query 145336 CTCGCAACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAG 145395 ||| || || |||||||||||||| | || || ||||| || ||| ||| ||| Sbjct 1178538 CTCACAGCTAGCCTCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCAGCTT 1178479 Query 145396 CATCGCTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTG 145455 ||||| || || |||||||| ||||| || | || |||||||| | ||||| Sbjct 1178478 TTGTGCTTCCTCACTTTCGTACGGATGGCGCATGAGAATGAACGCATCGGCCATTCCCTG 1178419 Query 145456 TATTCCCACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATA 145515 | || | ||||| || || || ||||||| | ||||| | | || || Sbjct 1178418 CACGCCGATACCGATAGGTCGGTGGCGCATGTTGGAACGCTTCGCCTCCGGCACCGGGTA 1178359 Query 145516 TCGATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAA 145575 || |||||| ||||| |||| ||| ||| || | ||| | | | | || Sbjct 1178358 GTAGTTGATGTCGATGATTTTGTTCAGGTTGCGCGTGACGATCTTGGCGACCTCCTTCAG 1178299 Query 145576 CTTTTCAAAGTCAAAC---CGAGCCT-CGTCAACGACCACACAGCTATTGACGGCGATCG 145631 ||| | ||||| || ||| || | ||| || ||| | || | || |||| Sbjct 1178298 CTTCACGAAGTCGTACGTGCGATCCGGCCTCA-----CAAACA--TGTTCAGCGCAATCG 1178246 Query 145632 ACGCCAAATTACAAACTGCCGTCTCCTCGG-CGTCGCTGTATTGTACGATCTCGGCGCAC 145690 |||||| ||| || || || | || || || || ||| | |||||||| | |||| Sbjct 1178245 ACGCCAGATTGCACACCGCAATTTCGTCCTTCGACGA-GTACTCGACGATCTCCGTGCAC 1178187 Query 145691 AAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCC 145750 | || || ||||| || |||| || ||||| || || |||| ||||||||| ||| Sbjct 1178186 AGGTTCGAGCACTTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCC 1178127 Query 145751 TTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT--AAAACGGTGCA 145808 ||||||||||||||||| |||| ||||| ||||||| ||| | ||| ||| || Sbjct 1178126 TTGTAGAGCATGTACGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAAC--CACA 1178069 Query 145809 AGTCCTGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCT 145868 |||||||| ||||||| | | | || || || | ||||| | |||| ||| Sbjct 1178068 GATCCTGCGCCTTCACCTGCCGGATGAACCGACCTTCCTTCTCGTAGCCCGTGTACAGCC 1178009 Query 145869 CCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCG 145928 ||||||| | || | | || ||||| ||||| || | || |||||||| || Sbjct 1178008 GCTCAAACTCTTCGCCCCACGACTCCGACAGCCCGGGGCAGTCGTGCGGACACATAAGGC 1177949 Query 145929 ACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACA 145988 ||| | |||| || | || |||| ||| |||| ||| ||||||||||||||||| | Sbjct 1177948 TCCACATTTCGTTCGCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAGCGCGTAGA 1177889 Query 145989 TCAAGTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACT-A 146047 || ||| ||||| | ||||| || ||||| ||||| || || | ||| | Sbjct 1177888 ACATGTCACGCGCACGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAG-AAACTCA 1177830 Query 146048 TAGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCA 146104 | | || | |||||||| || | |||| ||||| || || || ||||| Sbjct 1177829 AACACATCGCCATGCCACGGCTCGAGGTAGATGGCGAACGCACCGGGACGCTTGTTGCCG 1177770 Query 146105 CCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTG 146164 ||||||||||| | || || ||||||| |||| |||| ||| || | | ||| || Sbjct 1177769 CCCTGGTCCACATACCGGGCCGTGTTGTTGTAGACACGCAGCATCGGAACCAACCCGTTG 1177710 Query 146165 GCTACGCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACG 146224 | | |||||||| || || || | || | ||| || || |||| Sbjct 1177709 GAGATACCGTTCGTGCCCGCAATGTACGTACCCTTCGCCCGGATGCAGTGCACGTTCAGA 1177650 Query 146225 CCGAGACCGCCGCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCG 146284 || | || ||| || ||||||| || ||||| | ||||| ||||| || || Sbjct 1177649 CCAATGCCTCCGGCGGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAAATTCCC 1177590 Query 146285 TCAATGCTATCGCTTCGA-ATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGT 146343 || || || ||| | ||| || || |||||||| || ||| || | | | |||| Sbjct 1177589 TCGATACTGTCG-TCCGACATCGTTAGGAGAAAGCAGGACGACAGTTGGGGCCGCTGCGT 1177531 Query 146344 CCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTC----ATCATCC 146399 |||||| |||| ||||| ||||||||||| | || |||| | || Sbjct 1177530 GGCCGCCGCAAACATGGTCGGCGAGGCGTGCGTAAA---GTATC-GCTCCGAAAGCAAAT 1177475 Query 146400 GATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGA 146459 ||||||||||| || | | ||||| ||||| || || || | || |||||||| | Sbjct 1177474 TGTACGTTTCGATTGCCGCATCGATGTCCTCGCCGTGGATCCCGATGGCAACGCGCATCA 1177415 Query 146460 GCATGTGTTGGGGCCGCTCCGCCA-CTTG--ATTGTCAATCTTTAACAAATAG--CCGTT 146514 ||||||| || || || || | | |||| ||| ||||| | || ||| |||| Sbjct 1177414 GCATGTGCTGCGGTCGTTCGACGATCTTGCCCTTG---ATCTTCAGCAGGTAGGACCGT- 1177359 Query 146515 CTCCAGGGTTTTGTATCCGAAAAATTTGTACGTATAGTC 146553 || || |||||| | || ||| | |||||| | |||| Sbjct 1177358 -TCGAGCGTTTTGAAGCCAAAATAATTGTACCCAAAGTC 1177321 >seq9240 Length=943838 Score = 167 bits (184), Expect = 2e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | |||||||| | ||| | |||||||||||| ||||||||||| ||| | Sbjct 630357 CCACCACGGAGGCGCAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 630416 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | ||||||||||||||| ||| Sbjct 630417 AGCGTGCGTCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGG 630476 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | ||| | ||||| | || ||||| Sbjct 630477 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 630536 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||| ||||| || || ||||| ||||| |||||||| Sbjct 630537 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 630583 >seq9325 Length=2359367 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || ||||| | ||| || || || || | |||||| ||||| || |||||||| ||| | Sbjct 261130 CCTCCGCGAAGACGAAGAACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAC 261071 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| |||||||| || ||| |||| ||||||||||| || || || Sbjct 261070 AGAGTACGTCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGA 261011 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | ||| | || || | | ||||| Sbjct 261010 ATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAAGGCTCGACC 260951 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || || || || |||||||||||||| Sbjct 260950 TCGAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAAATCTGCAT 260904 >seq8899 Length=3132144 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| || | || | |||||||||||| ||||||||||| || Sbjct 384453 CCACCACGAAGTCGCAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAA 384512 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| |||||||| || ||| |||| | |||||| || || || || Sbjct 384513 AGCGTACGGCCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGTTGATCTGGCGGA 384572 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| || || |||||| ||| | | ||| | || || | | ||||| Sbjct 384573 ATTCCTTCCTTATCCTGAATTTTCGCCTTCACATTCTCGATCGTGTCCGACGGCTCGACC 384632 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || || ||||| |||||||||||||| Sbjct 384633 TCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACGAAAATCTGCAT 384679 >seq8738 Length=1280009 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| ||| || || | ||| | || |||||||| || ||||||||||| Sbjct 1177207 CCACCGCGCAGACGAAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGAA 1177266 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || || || ||||||||||| || |||| | ||||||||| || |||||| Sbjct 1177267 AGGGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGG 1177326 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| || || ||| | | ||| | || || | | ||| | Sbjct 1177327 ATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCTCAACC 1177386 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || || |||||||| ||||| Sbjct 1177387 TCCAACGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAAATTTGCAT 1177433 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| ||| || || | ||| | || |||||||| || ||||||||||| Sbjct 1177435 CCACCGCGCAGACGAAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGAA 1177494 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || ||||||||||| || |||| | ||||||||| || |||||| Sbjct 1177495 AGAGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGG 1177554 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| || || ||| | | ||| | || || | | ||| | Sbjct 1177555 ATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCTCCACC 1177614 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || || |||||||||||||| Sbjct 1177615 TCCAACGTGATGGTCTTTCCCGTAAGGGTCTTGACGAAAATCTGCAT 1177661 >seq9254 Length=4138565 Score = 98.7 bits (108), Expect = 9e-16 Identities = 267/403 (66%), Gaps = 7/403 (2%) Strand=Plus/Minus Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACT 46146 ||||| ||| ||||| | |||||||| |||| ||||| |||| | || | Sbjct 2197448 CCGTGTGTGAAGAAGAAGGCTGACTGGGCACTGAACTGGATTTCGAGCAAGAAAGCCAAC 2197389 Query 46147 TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTT 46206 |||| ||||||| | || || ||||| || ||||| | || || ||||| ||| Sbjct 2197388 TTCGGCGAGCGTGTTGTCGCGTTTGCCGCCGTCGAGGGAATTTTCTTCAGCGGCAGCTTT 2197329 Query 46207 GCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGA 46265 ||||| ||||| | | || || | ||| | | ||||| ||| |||| || ||||| Sbjct 2197328 GCCGCTATCTTCTGGCTTAAGAAGCGAGGAC-TGATGCCAGGCTTGACCTTCTCGAACGA 2197270 Query 46266 GCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTC-TCTACTATAACACTC 46324 |||||| ||||| ||||||||| |||| |||||||| || | | | | || || | Sbjct 2197269 GCTGATTTCGCGTGACGAGGGCTTGCACTGTGACTTTGCTTGCCTTATGTTCAAATAC-C 2197211 Query 46325 GCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCA 46384 || | | |||| ||| ||| ||| ||||| | || ||||||| | Sbjct 2197210 TGGTTC---AAAAGCCGACGCGCGAGCGTGTGACTAGCATCATTCGCGATGCGGTGGTAA 2197154 Query 46385 TTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGT 46444 | || ||||||| |||| || ||||| | | |||||||||||||| | Sbjct 2197153 TCGAACAGGAGTTCCTTACCAAGGCGCTGCCAGTCGATATGCTGGGCATGAACTGTGACC 2197094 Query 46445 CAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGT 46487 |||| | ||||||||||| || || ||||| ||||| || Sbjct 2197093 TGATGTCGCAGTACATCGAGTTCGTTGCCGACCGGCTGCTGGT 2197051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471956205665280