Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 354 8e-93
seq9240 167 2e-36
seq9325 122 8e-23
seq8899 113 4e-20
seq8738 104 2e-17
seq9254 98.7 9e-16
>seq9207
Length=1443628
Score = 354 bits (392), Expect = 8e-93
Identities = 1197/1839 (65%), Gaps = 50/1839 (3%)
Strand=Plus/Minus
Query 144740 GCTGGCTTGGTGCGCAAATAGTACATGCCCGTTTTGAGTCCCGAGCGCCAAGTGTAGTCG 144799
|| ||||||||||||| ||||||||||||||| || || ||| ||| |||| |
Sbjct 1179134 GCCGGCTTGGTGCGCAGATAGTACATGCCCGTCTTCAGGCCCATCTTCCAGCCGTAGAAG 1179075
Query 144800 TGTATCGACGTCATCAGAGCGTACGTGGGCTCCGCCACAAACAAATTTAGCGATTGGCTT 144859
|| |||||||||| | |||| | || || ||||| | || | ||| |||
Sbjct 1179074 TGAATCGACGTCAGCTTGCCGTAGTTCGGTTCGGCCACGTGAATGTTGAACGACTGGGAC 1179015
Query 144860 TGATCAATGAAAGCGTTGCGGTCGGCGGCCATCTCAATCATACGTTTGCATTTC-ATTTC 144918
||||| ||||| || ||||| |||||||| | || |||||| || || ||
Sbjct 1179014 TGATCGATGAACGCACCCCGGTCCGCGGCCATTTTGATGC-ACGTTTTCACCGATATCTC 1178956
Query 144919 CCAAGCGGTCTTGTACAAACGTTTAATGTGGTCCGGAATGCCGTCAATCGCCTGAATCGA 144978
||| | |||||||||| ||||| | |||||| | || ||| ||| |||||
Sbjct 1178955 CCACACCGTCTTGTACAGGTCGCGGATGTGCTGCGGAATTTCCTCGATCCGCTGTATCGA 1178896
Query 144979 CCCCTTGTGCGCAAATATGGCGTTCCGCATTTCGGACGTGTACAGTTTTAACTTGATCAA 145038
|| |||||||||| || |||| ||| ||| |||| | | | |||
Sbjct 1178895 ACCGTTGTGCGCAAGGATTTGGTTCTTCATATCGTCATCCCACAGGCCGAGTTCGGTCAG 1178836
Query 145039 GTCGTCAATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATA 145098
|| | | | | || ||||| ||||| |||||||| | || ||| || || ||
Sbjct 1178835 ATCCTGCAGCAGATGGTGGTTGACCACCTGGAACTCGCCCGACAGCACGCGCCGATTGTA 1178776
Query 145099 CACGTTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGC 145158
||||| || ||| | || || || |||||||| |||||||| ||||| || || | ||
Sbjct 1178775 GACGTTCGAAGTGTACGGCTCGAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGAGGC 1178716
Query 145159 GGTGGGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTT 145218
||| ||||| |||| || | ||||| || | || ||||| || | ||||||
Sbjct 1178715 GGTCGGCATCGGTGCCAGCAGGAGCGAATTCCGGATACCATGCTTGGCAATCTTTTCCTT 1178656
Query 145219 TAGCGTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAAT 145278
||| |||| | ||| || || || || ||||||||||||||||||| ||
Sbjct 1178655 CAGCTCGGCCCAGTTCCACAGGTCCGTTGGGGTCTTCTCCCACATGTCGTACTGCAGGAT 1178596
Query 145279 GCCCTCGCTGGCGGGGCTGCCTTGAAAGGAACTGTA---ACTGCCCCAAGTTTTGGCGAG 145335
|||| ||| | || | ||| | | | ||| || | | | | ||| |
Sbjct 1178595 TCCCTTGCTCACCGGACAGCCCTCGTACGTTTCGTACGGACCGTCGCGGGC---GGCCAA 1178539
Query 145336 CTCGCAACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAG 145395
||| || || |||||||||||||| | || || ||||| || ||| ||| |||
Sbjct 1178538 CTCACAGCTAGCCTCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCAGCTT 1178479
Query 145396 CATCGCTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTG 145455
||||| || || |||||||| ||||| || | || |||||||| | |||||
Sbjct 1178478 TTGTGCTTCCTCACTTTCGTACGGATGGCGCATGAGAATGAACGCATCGGCCATTCCCTG 1178419
Query 145456 TATTCCCACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATA 145515
| || | ||||| || || || ||||||| | ||||| | | || ||
Sbjct 1178418 CACGCCGATACCGATAGGTCGGTGGCGCATGTTGGAACGCTTCGCCTCCGGCACCGGGTA 1178359
Query 145516 TCGATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAA 145575
|| |||||| ||||| |||| ||| ||| || | ||| | | | | ||
Sbjct 1178358 GTAGTTGATGTCGATGATTTTGTTCAGGTTGCGCGTGACGATCTTGGCGACCTCCTTCAG 1178299
Query 145576 CTTTTCAAAGTCAAAC---CGAGCCT-CGTCAACGACCACACAGCTATTGACGGCGATCG 145631
||| | ||||| || ||| || | ||| || ||| | || | || ||||
Sbjct 1178298 CTTCACGAAGTCGTACGTGCGATCCGGCCTCA-----CAAACA--TGTTCAGCGCAATCG 1178246
Query 145632 ACGCCAAATTACAAACTGCCGTCTCCTCGG-CGTCGCTGTATTGTACGATCTCGGCGCAC 145690
|||||| ||| || || || | || || || || ||| | |||||||| | ||||
Sbjct 1178245 ACGCCAGATTGCACACCGCAATTTCGTCCTTCGACGA-GTACTCGACGATCTCCGTGCAC 1178187
Query 145691 AAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCC 145750
| || || ||||| || |||| || ||||| || || |||| ||||||||| |||
Sbjct 1178186 AGGTTCGAGCACTTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCC 1178127
Query 145751 TTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT--AAAACGGTGCA 145808
||||||||||||||||| |||| ||||| ||||||| ||| | ||| ||| ||
Sbjct 1178126 TTGTAGAGCATGTACGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAAC--CACA 1178069
Query 145809 AGTCCTGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCT 145868
|||||||| ||||||| | | | || || || | ||||| | |||| |||
Sbjct 1178068 GATCCTGCGCCTTCACCTGCCGGATGAACCGACCTTCCTTCTCGTAGCCCGTGTACAGCC 1178009
Query 145869 CCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCG 145928
||||||| | || | | || ||||| ||||| || | || |||||||| ||
Sbjct 1178008 GCTCAAACTCTTCGCCCCACGACTCCGACAGCCCGGGGCAGTCGTGCGGACACATAAGGC 1177949
Query 145929 ACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACA 145988
||| | |||| || | || |||| ||| |||| ||| ||||||||||||||||| |
Sbjct 1177948 TCCACATTTCGTTCGCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAGCGCGTAGA 1177889
Query 145989 TCAAGTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACT-A 146047
|| ||| ||||| | ||||| || ||||| ||||| || || | ||| |
Sbjct 1177888 ACATGTCACGCGCACGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAG-AAACTCA 1177830
Query 146048 TAGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCA 146104
| | || | |||||||| || | |||| ||||| || || || |||||
Sbjct 1177829 AACACATCGCCATGCCACGGCTCGAGGTAGATGGCGAACGCACCGGGACGCTTGTTGCCG 1177770
Query 146105 CCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTG 146164
||||||||||| | || || ||||||| |||| |||| ||| || | | ||| ||
Sbjct 1177769 CCCTGGTCCACATACCGGGCCGTGTTGTTGTAGACACGCAGCATCGGAACCAACCCGTTG 1177710
Query 146165 GCTACGCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACG 146224
| | |||||||| || || || | || | ||| || || ||||
Sbjct 1177709 GAGATACCGTTCGTGCCCGCAATGTACGTACCCTTCGCCCGGATGCAGTGCACGTTCAGA 1177650
Query 146225 CCGAGACCGCCGCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCG 146284
|| | || ||| || ||||||| || ||||| | ||||| ||||| || ||
Sbjct 1177649 CCAATGCCTCCGGCGGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAAATTCCC 1177590
Query 146285 TCAATGCTATCGCTTCGA-ATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGT 146343
|| || || ||| | ||| || || |||||||| || ||| || | | | ||||
Sbjct 1177589 TCGATACTGTCG-TCCGACATCGTTAGGAGAAAGCAGGACGACAGTTGGGGCCGCTGCGT 1177531
Query 146344 CCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTC----ATCATCC 146399
|||||| |||| ||||| ||||||||||| | || |||| | ||
Sbjct 1177530 GGCCGCCGCAAACATGGTCGGCGAGGCGTGCGTAAA---GTATC-GCTCCGAAAGCAAAT 1177475
Query 146400 GATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGA 146459
||||||||||| || | | ||||| ||||| || || || | || |||||||| |
Sbjct 1177474 TGTACGTTTCGATTGCCGCATCGATGTCCTCGCCGTGGATCCCGATGGCAACGCGCATCA 1177415
Query 146460 GCATGTGTTGGGGCCGCTCCGCCA-CTTG--ATTGTCAATCTTTAACAAATAG--CCGTT 146514
||||||| || || || || | | |||| ||| ||||| | || ||| ||||
Sbjct 1177414 GCATGTGCTGCGGTCGTTCGACGATCTTGCCCTTG---ATCTTCAGCAGGTAGGACCGT- 1177359
Query 146515 CTCCAGGGTTTTGTATCCGAAAAATTTGTACGTATAGTC 146553
|| || |||||| | || ||| | |||||| | ||||
Sbjct 1177358 -TCGAGCGTTTTGAAGCCAAAATAATTGTACCCAAAGTC 1177321
>seq9240
Length=943838
Score = 167 bits (184), Expect = 2e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | |||||||| | ||| | |||||||||||| ||||||||||| ||| |
Sbjct 630357 CCACCACGGAGGCGCAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 630416
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| ||||||||||| ||| |||| | ||||||||||||||| |||
Sbjct 630417 AGCGTGCGTCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGG 630476
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| ||| ||| | | ||| | ||||| | || |||||
Sbjct 630477 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 630536
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||||| ||| ||||| || || ||||| ||||| ||||||||
Sbjct 630537 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 630583
>seq9325
Length=2359367
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| ||||| | ||| || || || || | |||||| ||||| || |||||||| ||| |
Sbjct 261130 CCTCCGCGAAGACGAAGAACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAC 261071
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || |||||| |||||||| || ||| |||| ||||||||||| || || ||
Sbjct 261070 AGAGTACGTCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGA 261011
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | ||| | || || | | |||||
Sbjct 261010 ATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAAGGCTCGACC 260951
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | ||| || || || || || || ||||||||||||||
Sbjct 260950 TCGAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAAATCTGCAT 260904
>seq8899
Length=3132144
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||||| || | || | |||||||||||| ||||||||||| ||
Sbjct 384453 CCACCACGAAGTCGCAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAA 384512
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| |||||||| || ||| |||| | |||||| || || || ||
Sbjct 384513 AGCGTACGGCCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGTTGATCTGGCGGA 384572
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|||||||| || || |||||| ||| | | ||| | || || | | |||||
Sbjct 384573 ATTCCTTCCTTATCCTGAATTTTCGCCTTCACATTCTCGATCGTGTCCGACGGCTCGACC 384632
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || || || || ||||| ||||||||||||||
Sbjct 384633 TCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACGAAAATCTGCAT 384679
>seq8738
Length=1280009
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||||| ||| || || | ||| | || |||||||| || |||||||||||
Sbjct 1177207 CCACCGCGCAGACGAAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGAA 1177266
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || || || ||||||||||| || |||| | ||||||||| || ||||||
Sbjct 1177267 AGGGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGG 1177326
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
||||| || ||||| || || ||| | | ||| | || || | | ||| |
Sbjct 1177327 ATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCTCAACC 1177386
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || || || || || || |||||||| |||||
Sbjct 1177387 TCCAACGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAAATTTGCAT 1177433
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||||| ||| || || | ||| | || |||||||| || |||||||||||
Sbjct 1177435 CCACCGCGCAGACGAAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGAA 1177494
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || || || ||||||||||| || |||| | ||||||||| || ||||||
Sbjct 1177495 AGAGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGG 1177554
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
||||| || ||||| || || ||| | | ||| | || || | | ||| |
Sbjct 1177555 ATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCTCCACC 1177614
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || || || || || || ||||||||||||||
Sbjct 1177615 TCCAACGTGATGGTCTTTCCCGTAAGGGTCTTGACGAAAATCTGCAT 1177661
>seq9254
Length=4138565
Score = 98.7 bits (108), Expect = 9e-16
Identities = 267/403 (66%), Gaps = 7/403 (2%)
Strand=Plus/Minus
Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACT 46146
||||| ||| ||||| | |||||||| |||| ||||| |||| | || |
Sbjct 2197448 CCGTGTGTGAAGAAGAAGGCTGACTGGGCACTGAACTGGATTTCGAGCAAGAAAGCCAAC 2197389
Query 46147 TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTT 46206
|||| ||||||| | || || ||||| || ||||| | || || ||||| |||
Sbjct 2197388 TTCGGCGAGCGTGTTGTCGCGTTTGCCGCCGTCGAGGGAATTTTCTTCAGCGGCAGCTTT 2197329
Query 46207 GCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGA 46265
||||| ||||| | | || || | ||| | | ||||| ||| |||| || |||||
Sbjct 2197328 GCCGCTATCTTCTGGCTTAAGAAGCGAGGAC-TGATGCCAGGCTTGACCTTCTCGAACGA 2197270
Query 46266 GCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTC-TCTACTATAACACTC 46324
|||||| ||||| ||||||||| |||| |||||||| || | | | | || || |
Sbjct 2197269 GCTGATTTCGCGTGACGAGGGCTTGCACTGTGACTTTGCTTGCCTTATGTTCAAATAC-C 2197211
Query 46325 GCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCA 46384
|| | | |||| ||| ||| ||| ||||| | || ||||||| |
Sbjct 2197210 TGGTTC---AAAAGCCGACGCGCGAGCGTGTGACTAGCATCATTCGCGATGCGGTGGTAA 2197154
Query 46385 TTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGT 46444
| || ||||||| |||| || ||||| | | |||||||||||||| |
Sbjct 2197153 TCGAACAGGAGTTCCTTACCAAGGCGCTGCCAGTCGATATGCTGGGCATGAACTGTGACC 2197094
Query 46445 CAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGT 46487
|||| | ||||||||||| || || ||||| ||||| ||
Sbjct 2197093 TGATGTCGCAGTACATCGAGTTCGTTGCCGACCGGCTGCTGGT 2197051
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471956205665280
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