Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq9195 161 7e-35 seq9591 140 2e-28 seq8091 140 2e-28 seq2764 140 2e-28 seq2747 140 2e-28 seq2665 140 2e-28 seq750 140 2e-28 seq2763 136 3e-27 seq8087 129 4e-25 seq9240 96.9 2e-15 seq8738 96.9 2e-15 seq8899 93.3 3e-14 seq9545 89.7 3e-13 seq9394 89.7 3e-13 seq3008 89.7 3e-13 seq9380 84.2 1e-11 >seq9195 Length=777379 Score = 161 bits (178), Expect = 7e-35 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 6162 ATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCG 6221 |||| ||| ||||||| ||||| ||||| | ||| |||||||||||||| |||||| Sbjct 119246 ATGGCAACCGTGAACGTGAATCGCAATGTCACCGACATTTTCTACCGCTACAAGATGCCG 119187 Query 6222 CGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATG 6281 || || ||| ||||| || ||||| |||||||| || || || || || || |||||| Sbjct 119186 CGTATTAACGCGAAGGTGGAAGGTAAAGGAAACGGCATCAAGACGGTTATCGTGAACATG 119127 Query 6282 CCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGC 6341 || || || | || | || || ||||| ||||| |||||||| || ||||| ||| Sbjct 119126 GTGGACGTGGCCAGAGCTATTGGGCGTCCTGCAACCTATCCGACGAAGTACTTCGGATGC 119067 Query 6342 GAACTTGGCGCTCAGACGCAGTTTGATCACAA 6373 ||||| || || || ||||||||||||||||| Sbjct 119066 GAACTGGGAGCGCAAACGCAGTTTGATCACAA 119035 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434 ||||| || |||||||| || ||||||||| | | ||||| ||||||| | || ||| Sbjct 118937 AACGAACGTTTCATCGTGAATGGATCGCATGATGCGACCAAGTTGCAGGATCTGCTCGAC 118878 Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATT 6494 || || ||||| |||| |||||||| | || ||||| || ||||| ||||| || | Sbjct 118877 GGGTTCATTCGTAAGTACGTGCTGTGCCCCGAGTGCGACAATCCGGAAACCGATCTGCTG 118818 Query 6495 GTGTCTACCAAGAGAAACACCATCTCTCAGGGCTGCAAAGCGTGCGGTTACCATGGCAAG 6554 || || |||||| |||||||| |||||||||||||| || |||| ||| || | Sbjct 118817 GTCTCGTCCAAGAAGGGAACCATCTCGCAGGGCTGCAAAGCCTGTGGTTTCCACGGTCCG 118758 Query 6555 CTGGATTTATCACACAAACTCAACACCTTCATACTGAAGAATCCTCC 6601 || || | ||||| | ||||| | ||| | |||||||| || Sbjct 118757 CTCGAGGTGAACCACAAGGTGAACACGTACATCATCAAGAATCCGCC 118711 >seq9591 Length=1065 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 395 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAGGGAATCTCGT 454 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 455 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 489 >seq8091 Length=1106 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 120 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAGGGAATCTCGT 61 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 60 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 26 >seq2764 Length=1155 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 547 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAGGGAATCTCGT 488 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 487 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 453 >seq2747 Length=1093 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 146 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAGGGAATCTCGT 205 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 206 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 240 >seq2665 Length=1087 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 218 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAGGGAATCTCGT 277 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 278 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 312 >seq750 Length=15139 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 11723 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAGGGAATCTCGT 11664 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 11663 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 11629 >seq2763 Length=1034 Score = 136 bits (150), Expect = 3e-27 Identities = 87/95 (92%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 982 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAGGGAATCTCGT 923 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| ||||||||||||||| |||||||||||| Sbjct 922 TAATCCATTCATGCGCGTCACTGATTAGATGACGA 888 >seq8087 Length=1008 Score = 129 bits (142), Expect = 4e-25 Identities = 82/89 (92%), Gaps = 5/89 (6%) Strand=Plus/Plus Query 25908 GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCC 25962 |||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct 1 GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAGGGAATCTCGTTAATCC 60 Query 25963 TTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||||||||||||||||| Sbjct 61 ATTCATGCGCGTCACTAATTAGATGACGA 89 >seq9240 Length=943838 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | | |||| ||||| ||| || || |||||| ||||| ||||| || || Sbjct 630356 ACCACCACGGAGGCGCAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGA 630415 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 || ||| | || || | || || ||||| || || || || || || || | || Sbjct 630416 CAGCGTGCGTCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGG 630475 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 || ||| || |||||| || || ||||||||||| || ||||| || || Sbjct 630476 GATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGAC 630535 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || | ||||| || |||||||| | |||||| ||||| |||||||| || Sbjct 630536 CTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTT 630586 >seq8738 Length=1280009 Score = 96.9 bits (106), Expect = 2e-15 Identities = 163/235 (69%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||| | || ||| | |||| ||| ||||| |||||| || || ||||||| Sbjct 1177431 CATT-CCACCGCGCAGACGAAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAAT 1177489 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | || | | ||| | || || | || || |||||||| || || || || ||||| | Sbjct 1177490 CCGAAAGAGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTG 1177549 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 |||| || || |||||| ||| || ||||||||||| | || || | | Sbjct 1177550 GAGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCT 1177609 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 | || || || || || || || ||||| | ||| || ||||| |||||||| || Sbjct 1177610 CCACCTCCAACGTGATGGTCTTTCCCGTAAGGGTCTTGACGAAAATCTGCATCTT 1177664 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | || ||| | |||| ||| ||||| |||||| || || |||||||| || Sbjct 1177206 ACCACCGCGCAGACGAAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGA 1177265 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 | ||| | || || | || || |||||||| || || || || ||||| | || Sbjct 1177266 AAGGGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGG 1177325 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 || || || |||||| ||| || ||||||||||| | || || | ||||| Sbjct 1177326 GATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCTCAAC 1177385 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || || || || || |||| ||| || ||||| || ||||| Sbjct 1177386 CTCCAACGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAAATTTGCAT 1177433 >seq8899 Length=3132144 Score = 93.3 bits (102), Expect = 3e-14 Identities = 163/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 38088 TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCA 38147 |||||||| | | |||| |||| ||||| || |||||| ||||| ||||| || Sbjct 384450 TTACCACCACGAAGTCGCAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCC 384509 Query 38148 GACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207 || | ||| | || || | || || ||||| || || || || |||||||| | Sbjct 384510 GAAAGCGTACGGCCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGTTGATCTGGC 384569 Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCAC-TTTC 38266 || | ||||| || ||| |||||| ||||||||||| || || || | || || Sbjct 384570 GGAATTCCTTCCTTATCCTGAATTTTCGCCTTCACATTCTCGATCGTGTC-CGACGGCTC 384628 Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321 || || | || || || || || || | |||||||||||| |||||||| ||| Sbjct 384629 GACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACGAAAATCTGCATCTTT 384683 >seq9545 Length=1028 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||| ||| ||||||||||||||| ||||||||||||| ||||||||||| Sbjct 683 CTCTCTATTCAGAGTGCTTTTCAACTTTCCCACACGGTACTTGTTTACTATCGGTCTCAT 624 Query 20007 GGTAATATTTAGCCTTA 20023 ||| |||||||| ||| Sbjct 623 GGTCGTATTTAGCTTTA 607 >seq9394 Length=1150 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||| ||| ||||||||||||||| ||||||||||||| ||||||||||| Sbjct 470 CTCTCTATTCAGAGTGCTTTTCAACTTTCCCACACGGTACTTGTTTACTATCGGTCTCAT 529 Query 20007 GGTAATATTTAGCCTTA 20023 ||| |||||||| ||| Sbjct 530 GGTCGTATTTAGCTTTA 546 >seq3008 Length=1035 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||| ||| ||||||||||||||| ||||||||||||| ||||||||||| Sbjct 448 CTCTCTATTCAGAGTGCTTTTCAACTTTCCCACACGGTACTTGTTTACTATCGGTCTCAT 507 Query 20007 GGTAATATTTAGCCTTA 20023 ||| |||||||| ||| Sbjct 508 GGTCGTATTTAGCTTTA 524 >seq9380 Length=1414 Score = 84.2 bits (92), Expect = 1e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTT-CTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCG 20005 |||||| |||| ||| ||||||||||||||| ||||||||||||| ||||||||||| Sbjct 525 CTCTCTATTCAGAGTCGCTTTTCAACTTTCCCACACGGTACTTGTTTACTATCGGTCTCA 466 Query 20006 CGGTAATATTTAGCCTTA 20023 ||| |||||||| ||| Sbjct 465 TGGTCGTATTTAGCTTTA 448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334908043834952