Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq9195 161 7e-35
seq9591 140 2e-28
seq8091 140 2e-28
seq2764 140 2e-28
seq2747 140 2e-28
seq2665 140 2e-28
seq750 140 2e-28
seq2763 136 3e-27
seq8087 129 4e-25
seq9240 96.9 2e-15
seq8738 96.9 2e-15
seq8899 93.3 3e-14
seq9545 89.7 3e-13
seq9394 89.7 3e-13
seq3008 89.7 3e-13
seq9380 84.2 1e-11
>seq9195
Length=777379
Score = 161 bits (178), Expect = 7e-35
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 6162 ATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCG 6221
|||| ||| ||||||| ||||| ||||| | ||| |||||||||||||| ||||||
Sbjct 119246 ATGGCAACCGTGAACGTGAATCGCAATGTCACCGACATTTTCTACCGCTACAAGATGCCG 119187
Query 6222 CGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATG 6281
|| || ||| ||||| || ||||| |||||||| || || || || || || ||||||
Sbjct 119186 CGTATTAACGCGAAGGTGGAAGGTAAAGGAAACGGCATCAAGACGGTTATCGTGAACATG 119127
Query 6282 CCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGC 6341
|| || || | || | || || ||||| ||||| |||||||| || ||||| |||
Sbjct 119126 GTGGACGTGGCCAGAGCTATTGGGCGTCCTGCAACCTATCCGACGAAGTACTTCGGATGC 119067
Query 6342 GAACTTGGCGCTCAGACGCAGTTTGATCACAA 6373
||||| || || || |||||||||||||||||
Sbjct 119066 GAACTGGGAGCGCAAACGCAGTTTGATCACAA 119035
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434
||||| || |||||||| || ||||||||| | | ||||| ||||||| | || |||
Sbjct 118937 AACGAACGTTTCATCGTGAATGGATCGCATGATGCGACCAAGTTGCAGGATCTGCTCGAC 118878
Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATT 6494
|| || ||||| |||| |||||||| | || ||||| || ||||| ||||| || |
Sbjct 118877 GGGTTCATTCGTAAGTACGTGCTGTGCCCCGAGTGCGACAATCCGGAAACCGATCTGCTG 118818
Query 6495 GTGTCTACCAAGAGAAACACCATCTCTCAGGGCTGCAAAGCGTGCGGTTACCATGGCAAG 6554
|| || |||||| |||||||| |||||||||||||| || |||| ||| || |
Sbjct 118817 GTCTCGTCCAAGAAGGGAACCATCTCGCAGGGCTGCAAAGCCTGTGGTTTCCACGGTCCG 118758
Query 6555 CTGGATTTATCACACAAACTCAACACCTTCATACTGAAGAATCCTCC 6601
|| || | ||||| | ||||| | ||| | |||||||| ||
Sbjct 118757 CTCGAGGTGAACCACAAGGTGAACACGTACATCATCAAGAATCCGCC 118711
>seq9591
Length=1065
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 395 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAGGGAATCTCGT 454
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 455 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 489
>seq8091
Length=1106
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 120 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAGGGAATCTCGT 61
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 60 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 26
>seq2764
Length=1155
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 547 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAGGGAATCTCGT 488
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 487 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 453
>seq2747
Length=1093
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 146 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAGGGAATCTCGT 205
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 206 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 240
>seq2665
Length=1087
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 218 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAGGGAATCTCGT 277
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 278 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 312
>seq750
Length=15139
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 11723 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAGGGAATCTCGT 11664
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 11663 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 11629
>seq2763
Length=1034
Score = 136 bits (150), Expect = 3e-27
Identities = 87/95 (92%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 982 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAGGGAATCTCGT 923
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||| ||||||||||||
Sbjct 922 TAATCCATTCATGCGCGTCACTGATTAGATGACGA 888
>seq8087
Length=1008
Score = 129 bits (142), Expect = 4e-25
Identities = 82/89 (92%), Gaps = 5/89 (6%)
Strand=Plus/Plus
Query 25908 GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCC 25962
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 1 GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAGGGAATCTCGTTAATCC 60
Query 25963 TTTCATGCGCGTCACTAATTAGATGACGA 25991
||||||||||||||||||||||||||||
Sbjct 61 ATTCATGCGCGTCACTAATTAGATGACGA 89
>seq9240
Length=943838
Score = 96.9 bits (106), Expect = 2e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||| | | |||| ||||| ||| || || |||||| ||||| ||||| || ||
Sbjct 630356 ACCACCACGGAGGCGCAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGA 630415
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
|| ||| | || || | || || ||||| || || || || || || || | ||
Sbjct 630416 CAGCGTGCGTCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGG 630475
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
|| ||| || |||||| || || ||||||||||| || ||||| || ||
Sbjct 630476 GATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGAC 630535
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| | ||||| || |||||||| | |||||| ||||| |||||||| ||
Sbjct 630536 CTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTT 630586
>seq8738
Length=1280009
Score = 96.9 bits (106), Expect = 2e-15
Identities = 163/235 (69%), Gaps = 1/235 (0%)
Strand=Plus/Plus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| ||||| | || ||| | |||| ||| ||||| |||||| || || |||||||
Sbjct 1177431 CATT-CCACCGCGCAGACGAAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAAT 1177489
Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
| || | | ||| | || || | || || |||||||| || || || || ||||| |
Sbjct 1177490 CCGAAAGAGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTG 1177549
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
|||| || || |||||| ||| || ||||||||||| | || || | |
Sbjct 1177550 GAGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCT 1177609
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
| || || || || || || || ||||| | ||| || ||||| |||||||| ||
Sbjct 1177610 CCACCTCCAACGTGATGGTCTTTCCCGTAAGGGTCTTGACGAAAATCTGCATCTT 1177664
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||| | || ||| | |||| ||| ||||| |||||| || || |||||||| ||
Sbjct 1177206 ACCACCGCGCAGACGAAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGA 1177265
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
| ||| | || || | || || |||||||| || || || || ||||| | ||
Sbjct 1177266 AAGGGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGG 1177325
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
|| || || |||||| ||| || ||||||||||| | || || | |||||
Sbjct 1177326 GATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCTCAAC 1177385
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || || || || || || |||| ||| || ||||| || |||||
Sbjct 1177386 CTCCAACGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAAATTTGCAT 1177433
>seq8899
Length=3132144
Score = 93.3 bits (102), Expect = 3e-14
Identities = 163/235 (69%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 38088 TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCA 38147
|||||||| | | |||| |||| ||||| || |||||| ||||| ||||| ||
Sbjct 384450 TTACCACCACGAAGTCGCAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCC 384509
Query 38148 GACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207
|| | ||| | || || | || || ||||| || || || || |||||||| |
Sbjct 384510 GAAAGCGTACGGCCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGTTGATCTGGC 384569
Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCAC-TTTC 38266
|| | ||||| || ||| |||||| ||||||||||| || || || | || ||
Sbjct 384570 GGAATTCCTTCCTTATCCTGAATTTTCGCCTTCACATTCTCGATCGTGTC-CGACGGCTC 384628
Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321
|| || | || || || || || || | |||||||||||| |||||||| |||
Sbjct 384629 GACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACGAAAATCTGCATCTTT 384683
>seq9545
Length=1028
Score = 89.7 bits (98), Expect = 3e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||| ||| ||||||||||||||| ||||||||||||| |||||||||||
Sbjct 683 CTCTCTATTCAGAGTGCTTTTCAACTTTCCCACACGGTACTTGTTTACTATCGGTCTCAT 624
Query 20007 GGTAATATTTAGCCTTA 20023
||| |||||||| |||
Sbjct 623 GGTCGTATTTAGCTTTA 607
>seq9394
Length=1150
Score = 89.7 bits (98), Expect = 3e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||| ||| ||||||||||||||| ||||||||||||| |||||||||||
Sbjct 470 CTCTCTATTCAGAGTGCTTTTCAACTTTCCCACACGGTACTTGTTTACTATCGGTCTCAT 529
Query 20007 GGTAATATTTAGCCTTA 20023
||| |||||||| |||
Sbjct 530 GGTCGTATTTAGCTTTA 546
>seq3008
Length=1035
Score = 89.7 bits (98), Expect = 3e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||| ||| ||||||||||||||| ||||||||||||| |||||||||||
Sbjct 448 CTCTCTATTCAGAGTGCTTTTCAACTTTCCCACACGGTACTTGTTTACTATCGGTCTCAT 507
Query 20007 GGTAATATTTAGCCTTA 20023
||| |||||||| |||
Sbjct 508 GGTCGTATTTAGCTTTA 524
>seq9380
Length=1414
Score = 84.2 bits (92), Expect = 1e-11
Identities = 66/78 (85%), Gaps = 1/78 (1%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTT-CTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCG 20005
|||||| |||| ||| ||||||||||||||| ||||||||||||| |||||||||||
Sbjct 525 CTCTCTATTCAGAGTCGCTTTTCAACTTTCCCACACGGTACTTGTTTACTATCGGTCTCA 466
Query 20006 CGGTAATATTTAGCCTTA 20023
||| |||||||| |||
Sbjct 465 TGGTCGTATTTAGCTTTA 448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334908043834952
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