Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq9207 259 6e-64 >seq9207 Length=1443628 Score = 259 bits (286), Expect = 6e-64 Identities = 814/1253 (65%), Gaps = 21/1253 (2%) Strand=Plus/Minus Query 62465 TCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCT 62524 ||||| || ||||| | || || || || ||||| || ||||||| || || || | | Sbjct 1178537 TCACAGCTAGCCTCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCAGCTTT 1178478 Query 62525 TGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGA 62584 || |||||| || || | |||| | |||||| ||||| || || | ||| || Sbjct 1178477 TGTGCTTCCTCACTTTCGTACGGATGGCGCATGAGAATGAACGCATCGGCCATTCCCTGC 1178418 Query 62585 ACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAA 62644 || || ||||||||||||| || | | | || || | || || || | || || Sbjct 1178417 ACGCCGATACCGATAGGTCGGTGGCGCATGTTGGAACGCTTCGCCTCCGGCACCGGGTAG 1178358 Query 62645 TAATTAATATCTATAATTTTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTC 62701 || || || || || ||||| || || || | |||| || ||| | || |||||| Sbjct 1178357 TAGTTGATGTCGATGATTTTGTTCAGGTTGCGCGTGACGAT---CTTGGCGACCTCCTTC 1178301 Query 62702 AGTTTGAGAAAATCAAATCGCCCATC---TATTACAAACATGTTCAATGCAACAGATGCC 62758 || || | || || | | ||| | ||||||||||||| |||| || ||| Sbjct 1178300 AGCTTCACGAAGTCGTACGTGCGATCCGGCCTCACAAACATGTTCAGCGCAATCGACGCC 1178241 Query 62759 AGATTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATCTCAGTGCAAAGAT 62816 ||||| || || || | || | | || || || | | ||||| ||||| || | Sbjct 1178240 AGATTGCACACCGCAATTTCGT--CCTTCGACGAGTACTCGACGATCTCCGTGCACAGGT 1178183 Query 62817 TACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 62876 | |||||||| || || | || || || || ||||| ||| ||||||||||| | Sbjct 1178182 TCGAGCACTTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCCTTGT 1178123 Query 62877 AAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC 62936 | || ||| | || || || || | ||| || || || ||||| ||| | | Sbjct 1178122 AGAGCATGTACGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAACCACAGATCCT 1178063 Query 62937 GAGCCTTTA--TTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTC 62994 | ||||| | | || || | | ||| | ||||| || |||| || || Sbjct 1178062 GCGCCTTCACCTGCCGGA--TGAACCGACCTTCCTTCTCGTAGCCCGTGTACAGCCGCTC 1178005 Query 62995 GAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCA 63054 ||||| || ||||| | ||| || || || || | ||||||||| | ||| Sbjct 1178004 AAACTCTTCGCCCCACGACTCCGACAGCCCGGGGCAGTCGTGCGGACACATAAGGCTCCA 1177945 Query 63055 CTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 63114 | | ||| ||| ||| || ||||| || ||||| || | ||| || || || | Sbjct 1177944 CATTTCGTTCGCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAGCGCGTAGAACAT 1177885 Query 63115 ATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 63174 || | | | ||||| || || || || || || |||||||| ||| | | | Sbjct 1177884 GTCACGCGCACGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGAAACTCAAACAC 1177825 Query 63175 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTG 63234 ||| ||||||||| || | ||| ||||| | | || || || ||||| || ||||| Sbjct 1177824 ATCGCCATGCCACGGCTCGAGGTAGATGGCGAACGCACCGGGACGCTTGTTGCCGCCCTG 1177765 Query 63235 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGT 63294 || | || | || ||||| || || || | || ||| |||| | || ||||| | Sbjct 1177764 GTCCACATACCGGGCCGTGTTGTTGTAGACACGCAGCATCGGAACCAACCCGTTGGAGAT 1177705 Query 63295 ACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCT 63352 ||| || || || | || || | || | || || || | | | || ||||| Sbjct 1177704 ACCGTTCGTGCCCGCAATGTACGTACCCTTCGCCCGGATGCAGTGCACGTT--CAGACCA 1177647 Query 63353 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 63412 || || || || || ||||| | |||||| | || | ||| || || || ||||| Sbjct 1177646 ATGCCTCCGGCGGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAAATTCCCTCG 1177587 Query 63413 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 63472 ||||| || ||| ||| | || ||||| ||| |||| |||| | || || || Sbjct 1177586 ATACTGTCGTCCGACATCGTTAGGAGAAAGCAGGACGACAGTTGGGGCCGCTGCGTGGCC 1177527 Query 63473 GCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63532 || ||| | ||| || || ||||| ||||| || || ||||| | ||||||||| Sbjct 1177526 GCCGCAAACATGGTCGGCGAGGCGTGCGTAAAGTATCGCTCCGAAAGCAAATTGTACGTT 1177467 Query 63533 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 63592 || || || | || || ||| || || || | || || ||||| | ||||||| Sbjct 1177466 TCGATTGCCGCATCGATGTCCTCGCCGTGGATCCCGATGGCAACGCGCATCAGCATGTGC 1177407 Query 63593 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 63652 || |||| ||| ||||||||| || || |||| || |||||| ||| | ||||| Sbjct 1177406 TGCGGTCGTTCGACGATCTTGCCCTTGATCTTCAGCAGGTAGGACCGTTCGAGCGTTTTG 1177347 Query 63653 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63705 || |||||||| ||||| |||||| || ||||| || || ||||||| || Sbjct 1177346 AAGCCAAAATAATTGTACCCAAAGTCGCGATCGTAGATGATGGCCGAGTTCAG 1177294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633556027523200