Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 259 6e-64
>seq9207
Length=1443628
Score = 259 bits (286), Expect = 6e-64
Identities = 814/1253 (65%), Gaps = 21/1253 (2%)
Strand=Plus/Minus
Query 62465 TCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCT 62524
||||| || ||||| | || || || || ||||| || ||||||| || || || | |
Sbjct 1178537 TCACAGCTAGCCTCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCAGCTTT 1178478
Query 62525 TGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGA 62584
|| |||||| || || | |||| | |||||| ||||| || || | ||| ||
Sbjct 1178477 TGTGCTTCCTCACTTTCGTACGGATGGCGCATGAGAATGAACGCATCGGCCATTCCCTGC 1178418
Query 62585 ACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAA 62644
|| || ||||||||||||| || | | | || || | || || || | || ||
Sbjct 1178417 ACGCCGATACCGATAGGTCGGTGGCGCATGTTGGAACGCTTCGCCTCCGGCACCGGGTAG 1178358
Query 62645 TAATTAATATCTATAATTTTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTC 62701
|| || || || || ||||| || || || | |||| || ||| | || ||||||
Sbjct 1178357 TAGTTGATGTCGATGATTTTGTTCAGGTTGCGCGTGACGAT---CTTGGCGACCTCCTTC 1178301
Query 62702 AGTTTGAGAAAATCAAATCGCCCATC---TATTACAAACATGTTCAATGCAACAGATGCC 62758
|| || | || || | | ||| | ||||||||||||| |||| || |||
Sbjct 1178300 AGCTTCACGAAGTCGTACGTGCGATCCGGCCTCACAAACATGTTCAGCGCAATCGACGCC 1178241
Query 62759 AGATTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATCTCAGTGCAAAGAT 62816
||||| || || || | || | | || || || | | ||||| ||||| || |
Sbjct 1178240 AGATTGCACACCGCAATTTCGT--CCTTCGACGAGTACTCGACGATCTCCGTGCACAGGT 1178183
Query 62817 TACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 62876
| |||||||| || || | || || || || ||||| ||| ||||||||||| |
Sbjct 1178182 TCGAGCACTTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCCTTGT 1178123
Query 62877 AAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC 62936
| || ||| | || || || || | ||| || || || ||||| ||| | |
Sbjct 1178122 AGAGCATGTACGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAACCACAGATCCT 1178063
Query 62937 GAGCCTTTA--TTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTC 62994
| ||||| | | || || | | ||| | ||||| || |||| || ||
Sbjct 1178062 GCGCCTTCACCTGCCGGA--TGAACCGACCTTCCTTCTCGTAGCCCGTGTACAGCCGCTC 1178005
Query 62995 GAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCA 63054
||||| || ||||| | ||| || || || || | ||||||||| | |||
Sbjct 1178004 AAACTCTTCGCCCCACGACTCCGACAGCCCGGGGCAGTCGTGCGGACACATAAGGCTCCA 1177945
Query 63055 CTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 63114
| | ||| ||| ||| || ||||| || ||||| || | ||| || || || |
Sbjct 1177944 CATTTCGTTCGCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAGCGCGTAGAACAT 1177885
Query 63115 ATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 63174
|| | | | ||||| || || || || || || |||||||| ||| | | |
Sbjct 1177884 GTCACGCGCACGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGAAACTCAAACAC 1177825
Query 63175 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTG 63234
||| ||||||||| || | ||| ||||| | | || || || ||||| || |||||
Sbjct 1177824 ATCGCCATGCCACGGCTCGAGGTAGATGGCGAACGCACCGGGACGCTTGTTGCCGCCCTG 1177765
Query 63235 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGT 63294
|| | || | || ||||| || || || | || ||| |||| | || ||||| |
Sbjct 1177764 GTCCACATACCGGGCCGTGTTGTTGTAGACACGCAGCATCGGAACCAACCCGTTGGAGAT 1177705
Query 63295 ACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCT 63352
||| || || || | || || | || | || || || | | | || |||||
Sbjct 1177704 ACCGTTCGTGCCCGCAATGTACGTACCCTTCGCCCGGATGCAGTGCACGTT--CAGACCA 1177647
Query 63353 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 63412
|| || || || || ||||| | |||||| | || | ||| || || || |||||
Sbjct 1177646 ATGCCTCCGGCGGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAAATTCCCTCG 1177587
Query 63413 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 63472
||||| || ||| ||| | || ||||| ||| |||| |||| | || || ||
Sbjct 1177586 ATACTGTCGTCCGACATCGTTAGGAGAAAGCAGGACGACAGTTGGGGCCGCTGCGTGGCC 1177527
Query 63473 GCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63532
|| ||| | ||| || || ||||| ||||| || || ||||| | |||||||||
Sbjct 1177526 GCCGCAAACATGGTCGGCGAGGCGTGCGTAAAGTATCGCTCCGAAAGCAAATTGTACGTT 1177467
Query 63533 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 63592
|| || || | || || ||| || || || | || || ||||| | |||||||
Sbjct 1177466 TCGATTGCCGCATCGATGTCCTCGCCGTGGATCCCGATGGCAACGCGCATCAGCATGTGC 1177407
Query 63593 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 63652
|| |||| ||| ||||||||| || || |||| || |||||| ||| | |||||
Sbjct 1177406 TGCGGTCGTTCGACGATCTTGCCCTTGATCTTCAGCAGGTAGGACCGTTCGAGCGTTTTG 1177347
Query 63653 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63705
|| |||||||| ||||| |||||| || ||||| || || ||||||| ||
Sbjct 1177346 AAGCCAAAATAATTGTACCCAAAGTCGCGATCGTAGATGATGGCCGAGTTCAG 1177294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633556027523200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |