Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq8738 86.0 5e-12
>seq8738
Length=1280009
Score = 86.0 bits (94), Expect = 5e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| || || ||||| |||| || || ||||||| | || || ||| | ||
Sbjct 1177434 AATGCAAATTTTCGTCAAGACCCTGACTGGAAAGACCATCACGTTGGAGGTTGAGCCTTC 1177375
Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| || ||| ||||| | || | ||| ||||| || || || || || || |
Sbjct 1177374 GGACACGATTGAGAATGTGAAGGCCAAGATTCAG-GACAAGGAGGGAATCCCTCCAGATC 1177316
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||||| | || ||||||||||| || | ||||||| || || | |||||||
Sbjct 1177315 AGCAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGTACCCTTTCGGATTACA 1177256
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
| || || || || || || || ||| | || ||
Sbjct 1177255 ACATCCAGAAGGAGTCTACTCTCCATCTGGTCCT 1177222
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | || || || ||||||| | || |||||| | ||
Sbjct 1177661 ATGCAGATTTTCGTCAAGACCCTTACGGGAAAGACCATCACGTTGGAGGTGGAGCCTTCG 1177602
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || ||| ||||| | || | ||| ||||| || || || || || || ||
Sbjct 1177601 GACACGATTGAGAATGTGAAGGCCAAGATTCAG-GACAAGGAGGGAATCCCTCCAGATCA 1177543
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||| | || ||||||||||| || | ||||||| || ||| | ||||||||
Sbjct 1177542 GCAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGTACTCTTTCGGATTACAA 1177483
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || || || || || ||| | || ||
Sbjct 1177482 CATCCAGAAGGAGTCTACTCTCCATCTGGTCCT 1177450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433277342873480
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |