Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 266 3e-66
seq8899 116 3e-21
seq9240 111 1e-19
seq8738 105 6e-18
seq9325 98.7 8e-16
>seq9207
Length=1443628
Score = 266 bits (294), Expect = 3e-66
Identities = 1053/1644 (64%), Gaps = 26/1644 (2%)
Strand=Plus/Minus
Query 128772 TTGCGACTTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTA 128831
|| ||| |||||||| ||||| | || |||| | | |||||||||||||||| ||||||
Sbjct 1179171 TTTCGATTTGTCCACCGTAAACTGGATCGCGTTCACGGCCGGCTTGGTGCGCAGATAGTA 1179112
Query 128832 CATGCCTGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTA 128891
|||||| || |||| || | ||||| || | |||||||| |||| | ||||
Sbjct 1179111 CATGCCCGTCTTCAGGCCCATCTTCCAGCCGTAGAAGTGAATCGACGTCAGCTTGCCGTA 1179052
Query 128892 GGTGGGTTGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATC 128951
| | |||| || ||| || || || || ||||| || || | || || ||
Sbjct 1179051 GTTCGGTTCGGCCACGTGAATGTTGAACGACTGGGACTGATCGATGAACGCACCCCGGTC 1178992
Query 128952 GGCAGCCATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCT 129011
|| ||||| || | ||||||| || ||||||||||| ||||| || || |
Sbjct 1178991 CGCGGCCATTTTGATGCACGTTTTCACCGATATCTCCCACACCGTCTTGTACAGGTCGCG 1178932
Query 129012 CACGTGTTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTT 129071
| ||| | || ||||| || || ||| | ||||||| |||| |||| |||
Sbjct 1178931 GATGTGCTGCGGAATTTCCTCGATCCGCTGTATCGAACCGTTGTGCGCAAGGATTTGGTT 1178872
Query 129072 TCGCATCTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTAT 129131
||| | || | ||| |||| | ||| ||| | || | | ||| |
Sbjct 1178871 CTTCATATCGTCATCCCACAGGCCGAGTTCGGTCAGATCCTGCAGCAGATGGTGGTTGAC 1178812
Query 129132 TACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAA 129191
|| || || || |||| || ||||||||| ||| | ||| ||| ||||||| ||
Sbjct 1178811 CACCTGGAACTCGCCCGACAGCACGCGCCGATTGTAGACGTTCGAAGTGTACGGCTCGAA 1178752
Query 129192 CGATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCA-AA 129250
||| || |||||||| | ||||| ||||| | ||||| ||||| |||| ||| |
Sbjct 1178751 CGACTCGTTGTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGCATCGGTGCCA-GCAGGA 1178693
Query 129251 GCGAGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACATCG 129310
|||| || || | ||| |||| ||| | || || | | | ||||| |||||
Sbjct 1178692 GCGAATTCCGGATACCATGCTTGGCAATCTTTTCCTTCAGCTCGGCCCAGTTCCACAGGT 1178633
Query 129311 ATGTGGGTGTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACTGGAAA 129370
|| || || | | ||||| |||||| |||| || ||| || | |||| |
Sbjct 1178632 CCGTTGGGGTCTTCTCCCACATGTCGTACTGCAGGATTCCCTTGCTCACCGGACAGCCCT 1178573
Query 129371 AGTAGGAATCGTGCACGCCGTAAGCTTTTGCCAATTCGCAACTCGCTTCCAATGCGCCAA 129430
||| | |||| | |||| ||||| || || || || |||| ||||||
Sbjct 1178572 CGTACGTTTCGTACGGACCGTCGCGGGCGGCCAACTCACAGCTAGCCTCCAGAGCGCCAT 1178513
Query 129431 AATAAATTGTTTCGGCAATTTTGGTGTTCAACACTTTGGCCTGGTCGCTTTCGTACGGCA 129490
| || || || || || | ||||| | || || | || |||||||||||
Sbjct 1178512 AGTAGATGGTCTCAAAGATCTGCTGGTTCAGCTTTTGTGCTTCCTCACTTTCGTACGGAT 1178453
Query 129491 TACGCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTCGATGTT 129550
|||| | || | ||||||| || || | || | |||||| ||||| ||
Sbjct 1178452 GGCGCATGAGAATGAACGCATCGGCCATTCCCTGCACGCCGATACCGATAGGTCGGTGGC 1178393
Query 129551 TTCTATTGGATTTTTGTGCCGACAACAAGGGATAGTAGTTGATGTCTATAATTTTGTTTA 129610
| ||||| | ||| | || || |||||||||||||| || |||||||| |
Sbjct 1178392 GCATGTTGGAACGCTTCGCCTCCGGCACCGGGTAGTAGTTGATGTCGATGATTTTGTTCA 1178333
Query 129611 AATT---CTTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTACTCGCCTA 129667
|| | || || || || | || | || | | | | || | |||| ||
Sbjct 1178332 GGTTGCGCGTG---ACGATCTTGGCGACCTCCTTCAGCTTCACGAAGTCGTACGTGCGAT 1178276
Query 129668 CATCGATGTCGACAAATTGATTGACACAAATCGAGGCCAAATTGCAGACGGCACTTTCGT 129727
| || || ||||| || | |||||| |||| |||||| || ||| ||||||
Sbjct 1178275 C--CGGCCTC-ACAAACATGTTCAGCGCAATCGACGCCAGATTGCACACCGCAATTTCGT 1178219
Query 129728 TTTTGTCACTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAAT 129787
|| ||||||||| || || | ||||| || || || ||||||| |
Sbjct 1178218 CCTTCGACGAGTACTCGACGATCTCCGTGCACAGGTTCGAGCACTTGATCGTGCCCACGT 1178159
Query 129788 GCTTTTGATTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTT 129847
|| || || || ||| |||||| ||||| ||||| | |||||||||| |||||| |
Sbjct 1178158 TCTGCTGGTTGCTCTTCCGGTTGCACGCATCCTTGTAGAGCATGTACGGCACGCCCGTCT 1178099
Query 129848 CGACTTGCGTTTCGACAATGGTCCTGA---ACAAGTCTCGAGCCTTGATCTGTCTTACAA 129904
|||| |||| ||| ||| || || ||| || | ||||| | ||| | | |
Sbjct 1178098 CGACCTGCGACTCG---ATGATCGCGAACCACAGATCCTGCGCCTTCACCTGCCGGATGA 1178042
Query 129905 ATTTGCCACATTTCTCGTATGCCACATACAGTTGTTCAAATTCTGAGCCGTGTACGGTGT 129964
| || |||||||| || ||||| | ||||| ||| ||| |||
Sbjct 1178041 ACCGACCTTCCTTCTCGTAGCCCGTGTACAGCCGCTCAAACTCTTCGCC--CCACGACTC 1177984
Query 129965 CG--AGCAACGGCGATTCACGCGGACACATCAAACTCCACATTCCATCCGCTTCGACTCG 130022
|| ||| || | || |||||||||| | ||||||||| | | ||| || || ||
Sbjct 1177983 CGACAGCCCGGGGCAGTCGTGCGGACACATAAGGCTCCACATTTCGTTCGCCTCCACCCG 1177924
Query 130023 TTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGCTTTTCTATCCTC 130082
||||| |||| ||| || |||||||| ||||| |||| || ||||| |||||
Sbjct 1177923 CTTCATGAACAGATCCGGCACCCACAGCGCGTAGAACATGTCACGCGCACGGACCTCCTC 1177864
Query 130083 GGCACCCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAAC 130142
|| |||| ||||| || || || || | | ||| | |||||||| || |
Sbjct 1177863 CTTGCCAGTGTTTTTCTTCAGATCGAGAAACTCAAACACATCGCCATGCCACGGCTCGAG 1177804
Query 130143 ATAAATTGCCATTGCGCCCTTCCG---TTTGCCCCCTTGGTCAACGTGGCGCACGGCATT 130199
|| || || | || || || ||||| || ||||| || | || | | ||
Sbjct 1177803 GTAGATGGCGAACGCACCGGGACGCTTGTTGCCGCCCTGGTCCACATACCGGGCCGTGTT 1177744
Query 130200 GTTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTTTGTGCTCTCAATGAA 130259
||||||||| |||| ||| | |||| ||||||| | ||||| |||| | ||||| |
Sbjct 1177743 GTTGTAGACACGCAGCATCGGAACCAACCCGTTGGAGATACCGTTCGTGCCCGCAATGTA 1177684
Query 130260 ACTGCCACGAGCCCGAACGTTATGAACGCTTAGACCTATGCCGCCGCCAAATTTTGATAT 130319
| || ||||| | | || ||| | ||||| ||||| ||| | | || || ||
Sbjct 1177683 CGTACCCTTCGCCCGGATGCAGTGCACGTTCAGACCAATGCCTCCGGCGGACTTGGAGAT 1177624
Query 130320 CAACGCGCAATCGCGT-AGCGTTTCATAAATGCCAACGATACTGTCTTCTTTAATGTTTA 130378
|| ||||| | || | ||||| || ||||| || |||||||||| || || |||
Sbjct 1177623 CAGTGCGCACT-GCTTCAGCGTGTCGTAAATTCCCTCGATACTGTCGTCCGACATCGTTA 1177565
Query 130379 GGAGGAAACACGAGGCCAATTGGG 130402
|||| || || || | || |||||
Sbjct 1177564 GGAGAAAGCAGGACGACAGTTGGG 1177541
>seq8899
Length=3132144
Score = 116 bits (128), Expect = 3e-21
Identities = 165/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||||||||| ||||| || ||||| | || || || || |||| ||||| || || |
Sbjct 384683 AAAGATGCAGATTTTCGTGAAAACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGCC 384624
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
| || || | || || | || |||||||| || ||||| || ||||| || ||
Sbjct 384623 GTCGGACACGATCGAGAATGTGAAGGCGAAAATTCAGGATAAGGAAGGAATTCCGCCAGA 384564
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
|||||| ||||| || || ||||| || ||| | |||||| ||| || | || || ||
Sbjct 384563 TCAACAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGATGGCCGTACGCTTTCGGACTA 384504
Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||||| || || || ||| | || | ||| ||||| | || || |||
Sbjct 384503 CAACATTCAGAAGGAGTCGACCCTTCACCTGGTTCTGCGACTTCGTGGTGGT 384452
>seq9240
Length=943838
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| || || || ||||| | || ||||| || | || ||||| || || ||
Sbjct 630586 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 630527
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| ||||| | || || | || || || || ||||||||||| || || || ||
Sbjct 630526 TCGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGAC 630467
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || ||||| || || |||||||| ||| | |||||| ||||| | ||||| |||
Sbjct 630466 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGACGCACGCTGTCCGACTAC 630407
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| || || || ||| | ||| | || |||| | || || |||
Sbjct 630406 AACATTCAGAAGGAGTCGACCCTCCATCTGGTGCTGCGCCTCCGTGGTGGT 630356
>seq8738
Length=1280009
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || || | || || || || |||| | || || || | |
Sbjct 1177433 ATGCAAATTTTCGTCAAGACCCTGACTGGAAAGACCATCACGTTGGAGGTTGAGCCTTCG 1177374
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || | || || ||||| ||||||||||| || || || |||||
Sbjct 1177373 GACACGATTGAGAATGTGAAGGCCAAGATTCAGGACAAGGAGGGAATCCCTCCAGATCAG 1177314
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || ||||||||||| ||| | || ||| ||| ||| | || |||||||||
Sbjct 1177313 CAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGTACCCTTTCGGATTACAAC 1177254
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449
|| || || || || || | ||| | || | || ||||||| ||||||
Sbjct 1177253 ATCCAGAAGGAGTCTACTCTCCATCTGGTCCTTCGTCTGCGCGGTGGTTTT 1177203
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| ||||| || || || | || || || || |||| | || ||||| |
Sbjct 1177664 AAGATGCAGATTTTCGTCAAGACCCTTACGGGAAAGACCATCACGTTGGAGGTGGAGCCT 1177605
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| || || | || || | || || ||||| ||||||||||| || || || |||
Sbjct 1177604 TCGGACACGATTGAGAATGTGAAGGCCAAGATTCAGGACAAGGAGGGAATCCCTCCAGAT 1177545
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || ||||| || ||||||||||| ||| | || ||| ||| || | || ||||||
Sbjct 1177544 CAGCAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGTACTCTTTCGGATTAC 1177485
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
||||| || || || || || | ||| | || | || ||||||| ||
Sbjct 1177484 AACATCCAGAAGGAGTCTACTCTCCATCTGGTCCTTCGTCTGCGCGGTGG 1177435
Score = 84.2 bits (92), Expect = 2e-11
Identities = 153/223 (69%), Gaps = 1/223 (0%)
Strand=Plus/Minus
Query 22211 TTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGG 22270
||| ||| |||||||||||||| || || | ||||| || ||| |||| || || || |
Sbjct 1179351 TTGCAAA-ATGCAAATTTTTGTGAAGACACTGACCGGCAAGACGATCACGCTAGACGTCG 1179293
Query 22271 AAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCAC 22330
|| |||| || || ||||| ||| ||||| |||| |||||||| |||
Sbjct 1179292 TGGCCTCCGAGACGGTCTTGGATATAAAAAGCAAAATCGAAGAGCGAGAGGGTATAGCAC 1179233
Query 22331 CCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCG 22390
| || || || ||| | || || || || || ||| | || ||| || | | | ||||
Sbjct 1179232 CGGACCAGCAGCGTATCATCTTCGCGGGAAAGCAGCTTGAAGATGGGCGGATCATTTCCG 1179173
Query 22391 ATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433
| |||||||| || | | ||| || || || || || ||||
Sbjct 1179172 ACTACAACATCCAGCACGGATCAACGATGCACTTGGTCCTGCG 1179130
>seq9325
Length=2359367
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || || | || || || || ||||||| || || || | |
Sbjct 260904 ATGCAGATTTTCGTGAAGACGCTGACTGGCAAGACCATCACTCTCGAGGTCGAGCCTTCG 260963
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | |||| || || || ||||||||||||||||| || |||||
Sbjct 260964 GACACCATCGAGAACGTCAAGGCTAAGATCCAGGACAAGGAGGGTATTCCCCCAGATCAG 261023
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || || || || || ||| | ||||| || || | ||||| ||||||
Sbjct 261024 CAGCGTTTGATCTTCGCTGGAAAGCAGCTGGAGGACGGACGTACTCTGTCCGACTACAAC 261083
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || ||||| ||| | || || ||| | || | ||||||||
Sbjct 261084 ATCCAGAAGGAATCGACCCTTCACTTGGTTCTTCGTCTTCGCGGAGG 261130
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419678932747480
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