Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq8738 170 4e-37
seq9325 163 5e-35
seq9254 163 5e-35
seq9240 152 9e-32
seq9207 89.7 9e-13
>seq8738
Length=1280009
Score = 170 bits (188), Expect = 4e-37
Identities = 175/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
|||| ||||| || || | |||| || || || ||||| || |||||||| ||||| |
Sbjct 1177433 TTCCACCGCGCAGACGAAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCG 1177492
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
| || || | |||||||| | |||||| ||||| || ||||| | || || || || |
Sbjct 1177493 AAAGAGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAG 1177552
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
| || || |||||||| |||||||| ||||| || ||| || ||||| | | || |
Sbjct 1177553 GGATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCTCCA 1177612
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| ||||| |||||||| |||||||| |||||||||||||| ||||||||
Sbjct 1177613 CCTCCAACGTGATGGTCTTTCCCGTAAGGGTCTTGACGAAAATCTGCAT 1177661
Score = 159 bits (176), Expect = 6e-34
Identities = 177/236 (75%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286
||||| || ||||| || || | |||| || || || ||||| || |||||||| |
Sbjct 1177199 TTTAAAAACCACCGCGCAGACGAAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGT 1177258
Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346
|||| || || || | |||||||| | |||||| ||||| || ||||| | || || |
Sbjct 1177259 AATCCGAAAGGGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGAT 1177318
Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406
| || || || || |||||||| |||||||| ||||| || ||| || ||||| | |
Sbjct 1177319 CTGGAGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATCGTGTCCGAAG 1177378
Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || ||||| |||||||| ||||| || |||||||||||||| || ||||||
Sbjct 1177379 GCTCAACCTCCAACGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAAATTTGCATT 1177434
>seq9325
Length=2359367
Score = 163 bits (180), Expect = 5e-35
Identities = 177/235 (75%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 68232 TTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCG 68291
|||||||||||||| || | |||||||| || || || || || |||||||| || |||
Sbjct 261133 TTTCCTCCGCGAAGACGAAGAACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCG 261074
Query 68292 GAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGT 68351
|| || || | || || || | |||||| || ||||| || | | || || || ||
Sbjct 261073 GACAGAGTACGTCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGG 261014
Query 68352 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCT 68411
||||| || |||||||| || ||||| ||||||||| |||||||||||| | | ||
Sbjct 261013 GGAATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAAGGCTCG 260954
Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGC 68466
|| || | |||||||| || || || || ||||| ||||| ||||||||| |||
Sbjct 260953 ACCTCGAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAAATCTGCATTCTGC 260899
>seq9254
Length=4138565
Score = 163 bits (180), Expect = 5e-35
Identities = 353/522 (68%), Gaps = 12/522 (2%)
Strand=Plus/Plus
Query 268209 CCCCAGTTGCAATCACAAAGTCCTCTGGCTCAGGAGACTGGAGCATTTTCCACATTGCTT 268268
||||||| || || ||||| || || || | ||| | |||| |||||| || |
Sbjct 2756294 CCCCAGTGGCGATGACAAAATCTTCCGGTTTGTCCTGCTGCATCATTAGCCACATGGCCT 2756353
Query 268269 CGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGC 268328
| || ||||| ||||| ||||| || ||||| | ||| | || || || || ||
Sbjct 2756354 CCACGTAGTCTTTGGCATGCCCCCAGTCACGCTTGGAGTCAAGATTGCCCAGCTCCAAGC 2756413
Query 268329 ATTTCTGCTTGCCGAGC----TTCACGCGTGCAA-GACCGCGAGTGATTTTTCGGGTCAC 268383
| | ||||| ||| ||| || ||| || ||||| | | || || ||||| ||
Sbjct 2756414 ACTCCTGCTGGCCAAGCGAGATTTTCGC---CACTGACCGGG--TTATCTTGCGGGTGAC 2756468
Query 268384 GAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACAT 268443
|| |||| || || | || ||||||||| || || ||||| ||||| || |||||
Sbjct 2756469 AAAATTCTCTCCCCGCCGCGGAGACTCGTGGTTAAAAAGAATGCCATTGCAGGCAAACAT 2756528
Query 268444 GCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTA 268503
| | || || || ||||| || | || ||||||| | ||||||| ||| |||||
Sbjct 2756529 GTCGTACGCTTCGCGGTAATTTATCACAATCCAGTAGCCGTACATCTTGGCACAAGCGTA 2756588
Query 268504 CGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACTTTGCCAAA 268563
||| ||||| |||| |||||| || | || || || |||| || ||||| |
Sbjct 2756589 CGGCGAACGCGGATAGAAGGGTGTTTTTTCATTCTGTGGCGTTTCCACCACCTTGCCGTA 2756648
Query 268564 GAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCA-GATTCGGA 268622
||||| || || ||||| |||||||| | ||||| | ||| || | | ||||
Sbjct 2756649 AAGCTCCGAAGTGGATGCCTGGTAGAATCGAACCGACTTTTCCA-ACCCCACGGTGCGGA 2756707
Query 268623 TTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCATCT 268682
| || || ||||| || || ||||| | ||||||| || || || || || || |
Sbjct 2756708 TGGCGTCCAGCAAGCGCAGTGTTCCGACCGCATCCACCTCGGCCGTGTATTCGCTCAAAT 2756767
Query 268683 CGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAA 268724
|||| || | | ||||| || ||||| ||||||||||||
Sbjct 2756768 CGAAGGAAATTTTCACATGACTTTGGGCAGCCAGGTTATAAA 2756809
>seq9240
Length=943838
Score = 152 bits (168), Expect = 9e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||||| |||| || || || ||||| || || ||||| || |||||
Sbjct 630357 CCACCACGGAGGCGCAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 630416
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| |||||||| || || | || ||||| || ||
Sbjct 630417 AGCGTGCGTCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGG 630476
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| ||||| || |||||| || || | | || ||
Sbjct 630477 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 630536
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||| ||||| || ||||||||||| |||||||| ||||||||
Sbjct 630537 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 630583
>seq9207
Length=1443628
Score = 89.7 bits (98), Expect = 9e-13
Identities = 131/183 (72%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 31701 CACACCGCCGTTTCGTCCGTAGAAGTGTATTCGACAATCTCGGCACAAAGATTGCTGCCC 31760
|||||||| |||||||| | || | ||| ||||| ||||| | || || || || |
Sbjct 1178234 CACACCGCAATTTCGTCCTTCGACGAGTACTCGACGATCTCCGTGCACAGGTTCGAGCAC 1178175
Query 31761 GTGATGGTGCCGGCATTGGACTGCATGTTCTTCACGTT-CACGCTGTCCTTGTTGAGCAC 31819
|||| ||||| | || ||| || ||||| ||| ||||| ||||||| |||||
Sbjct 1178174 TTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCA-TCCTTGTAGAGCAT 1178116
Query 31820 GTAAGGCATGCCCGTCTCGATCTGCGTGATGATCATCGCATTCCAGACATCGCGCGCTTT 31879
||| |||| ||||||||||| ||||| ||| ||||| ||| | ||| |||| ||
Sbjct 1178115 GTACGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAACCACAGATCCTGCGCCTT 1178056
Query 31880 GAC 31882
||
Sbjct 1178055 CAC 1178053
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921511897474240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |