Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_008953.1
Length=3935
Score E
Sequences producing significant alignments: (Bits) Value
seq9181 100 7e-18
seq9069 80.6 7e-12
>seq9181
Length=525874
Score = 100 bits (110), Expect = 7e-18
Identities = 211/312 (68%), Gaps = 7/312 (2%)
Strand=Plus/Minus
Query 3198 CTGCGAGCTGCTAAACTTTGTCAACGTTGTCGCACAGATATGCTTCATGAATGCCTTTAT 3257
||||||| | | |||||||||||||| ||| ||||| | ||||||| | ||| |
Sbjct 20183 CTGCGAGGCGTTGAACTTTGTCAACGTGCTCGGTCAGATCTACTTCATGGACTTCTTCCT 20124
Query 3258 AGGCGAAGACTTTTTGTTGTACGGAATCTATGTTACCTTCTTCAACCAG--GAAGCCGCC 3315
| || || || | | |||||| | | | || ||||| | || | |||||
Sbjct 20123 CGACGGCGAGTTCTCGACGTACGGTAGCGACGTGGTGCGCTTCACCGAGATGGAGCCGGA 20064
Query 3316 CATCCGAACATGACGAACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTT 3375
|| | || ||| ||| ||| ||| || || || | | |||| ||||| ||
Sbjct 20063 G----GAGCGTGGCGA-CCCGATGGCGCGGGTGTTCCCGAAAGTCACCAAGTGTACCTTC 20009
Query 3376 CACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAG 3435
||||| |||||| | || || | || | || | ||| || | ||| | || ||| |
Sbjct 20008 CACAAGTACGGTGCGTCCGGAAGCGTGCAGAAGTTCGACGGTTTGTGCGTGCTGCCGCTG 19949
Query 3436 AACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCTACGTGCTAGCCATC 3495
||| | |||||||||||||||||| | ||||| |||||||||||| | |||| |||||
Sbjct 19948 AACATCGTCAACGAGAAGATCTACGTGTTCCTGTGGTTCTGGTTCATCCTGCTCACCATC 19889
Query 3496 ATCAGCGGTATC 3507
| | ||| |||
Sbjct 19888 CTGACCGGCATC 19877
>seq9069
Length=72923
Score = 80.6 bits (88), Expect = 7e-12
Identities = 84/109 (77%), Gaps = 1/109 (1%)
Strand=Plus/Plus
Query 3370 ACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTC 3429
|||||| |||| |||||||| | ||||| | | || |||| | ||||||||| |
Sbjct 26576 ACTTTT-ACAAGTACGGTCCGACCGGCTCGATTCAGAAACACGACGCACTCTGCATTATG 26634
Query 3430 CCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGT 3478
|| ||||||| ||||||||||||||| || || |||||||||||||
Sbjct 26635 GCGCTGAACGTGATCAACGAGAAGATCTTCACGTTTCTCTGGTTCTGGT 26683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 12478690692000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |