Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 553 3e-152
seq9254 192 1e-43
>seq9207
Length=1443628
Score = 553 bits (612), Expect = 3e-152
Identities = 1289/1904 (68%), Gaps = 90/1904 (5%)
Strand=Plus/Minus
Query 243735 CCACGCTGAACTGGA-CGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTC 243793
|||| | ||||||| || || | ||||| | |||||| | ||| ||||||||||| |||
Sbjct 1179160 CCACCGTAAACTGGATCGCGTTC-ACGGCCGGCTTGGTGCGCAGATAGTACATGCCCGTC 1179102
Query 243794 TTGAGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTT 243853
|| || || | |||| ||| || ||| || | ||||||||| | | || ||
Sbjct 1179101 TTCAGGCCCATCTTCCAGCCGTAGAAGTGAATCGACGTCAGCTTGC----CGT-AG-TTC 1179048
Query 243854 GGGTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGC 243913
|| ||| || || ||| | |||| |||||| ||| |||| ||| | ||||
Sbjct 1179047 GGTTCGGCCACGT---GAATG---TTGAACGACTGGGACTGATCGATGAACGCACCCCGG 1178994
Query 243914 TCTGCGGCCATGGTGATG-AGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGG 243972
|| |||||||| ||||| | || ||| |||||||| || |||||||||| | |
Sbjct 1178993 TCCGCGGCCATTTTGATGCACGTT-TTCACCGATATCTCCCACACCGTCTTGTACAGGTC 1178935
Query 243973 CTTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTG 244032
|| ||||| || | | ||||| ||| | ||| || ||||| | | || ||
Sbjct 1178934 GCGGATGTGCTGCGGAATTTCCTCGATCCGCTGTATCGAACCGTTGTGCGCAAGGATTTG 1178875
Query 244033 GGTGCGCATGTTATCGTTCCACAGGCCCAAG-CGCTCCAGCGCCTCGACCAGGTGCCTGT 244091
| | ||| | || | ||||||||| | || || || ||| | ||| || ||
Sbjct 1178874 GTTCTTCATATCGTCATCCCACAGGCCGAGTTCGGTC-AGATCCTGCAGCAGATGGTGGT 1178816
Query 244092 TCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCT 244151
| |||||||| ||||| |||||||||||||| || | ||||| ||| || |||||
Sbjct 1178815 TGACCACCTGGAACTCGCCCGACAGCACGCGCCGATTGTAGACGTTCGAAGTGTACGGCT 1178756
Query 244152 CGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCA 244211
||| ||| |||||||||| || || |||||| || |||||||| || | || ||
Sbjct 1178755 CGAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGCATCGGTGCCAGCA 1178696
Query 244212 GCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACA 244271
| || |||| | || ||| | || | |||||| ||||| |||||
Sbjct 1178695 GGAGCGAATTCCGGATACCATGCTTGGCAATCTTTTCCTTCAGCTCGGCCCAGTTCCACA 1178636
Query 244272 TGCCCGA-GAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTG 244330
| ||| | |||| || | ||||||||| ||||||| | ||||||||
Sbjct 1178635 GGTCCGTTGGGGTCTTCTC----------CCACATGTCGTACTGCAGGATTCCCTTGCTC 1178586
Query 244331 ACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCG 244390
|| || | ||||||||| || ||| ||||||||||| ||||| || |||||| |
Sbjct 1178585 ACCGGACAGCCCTCGTACGTTTCGTACGGACCGTCGCGGGCGGCCAACTCACAGCTAGCC 1178526
Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG 244450
|| || ||| | |||||||||||||| |||||| || ||||| | | || | ||
Sbjct 1178525 TCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCAGCTTTTGTGCTT--CCT 1178468
Query 244451 CAGGT--GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGC 244508
|| | | | || || ||| | ||||| | ||||||| ||||||||||||||| |
Sbjct 1178467 CACTTTCGTACGGATGGCGCATGAGAATGAACGCATCGGCCATTCCCTGCACGCCGATAC 1178408
Query 244509 CGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568
|||| |||| ||| ||| ||||||| ||| | || || ||||| ||||| ||||| ||
Sbjct 1178407 CGATAGGTCGGTGGCGCATGTTGGAACGCTTCGCCTCCGGCACCGGGTAGTAGTTGATGT 1178348
Query 244569 CGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGT 244628
|||| | ||||| |||||||| |||| || | |||| || |||| | ||||
Sbjct 1178347 CGATGATTTTGTTCAGGTTGCGCGTGACGATCTTGGCGACCTCCTTCAGCTTCACGAAGT 1178288
Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGG 244688
||||| || | ||||| || |||||||||| ||| || || | |
Sbjct 1178287 CGTAC--GT-GCGATCC--------GG----CCTCACAAACATGTTCAGCGCAATCGACG 1178243
Query 244689 CCAGGTTGCAGACGGCCA---CCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGA 244745
|||| ||||| || || | | |||| ||| | ||||| ||| ||||| ||||| |
Sbjct 1178242 CCAGATTGCACACCGCAATTTCGTCCTTCGAC---GAGTACTCGACGATCTCCGTGCACA 1178186
Query 244746 GGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCT 244805
|||| ||||||||| ||||||| || ||| || ||| ||| |||||| || ||||
Sbjct 1178185 GGTTCGAGCACTTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCCT 1178126
Query 244806 TGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGG 244864
||||||||||| | ||| | || ||||||| ||| | ||| || ||| | ||| ||
Sbjct 1178125 TGTAGAGCATGTACGGCACGCCCGTCTCGACCTGCGACTCGATGATCGC-GAACCACAGA 1178067
Query 244865 TCCCTAGCCTTGACCGTCCTGC-GAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGC 244923
||| ||||| ||| || | || || || || |||||||| ||||||||
Sbjct 1178066 TCCTGCGCCTTCACCTGCCGGATGAACCGA-CCTTCCTTCTCGTAGCCCGTGTACAGCCG 1178008
Query 244924 CTCGAACTCGGGGCCCCA-GACCTCGTCTAGGCCGGGGCACGACGC-CGGGCACATGAGA 244981
||| ||||| |||||| ||| || | || |||||||| | || ||| ||||| ||
Sbjct 1178007 CTCAAACTCTTCGCCCCACGACTCCGAC-AGCCCGGGGCA-GTCGTGCGGACACATAAGG 1177950
Query 244982 CTCCAC---TCGC-CGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGC 245037
|||||| ||| |||| ||| |||| || |||||| || || || | ||| || ||
Sbjct 1177949 CTCCACATTTCGTTCGCC-TCC---ACCCGCTTCATGAACAGATCCGGCACCCACAGCGC 1177894
Query 245038 CTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAA 245097
| ||| | ||| | | | ||| ||| ||||||||| ||| |||| || | |||
Sbjct 1177893 GTAGAACATGTCACGCGCACGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGAAA 1177834
Query 245098 GTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTT 245157
||||| || ||| | ||||| ||||| | ||||| |||| || ||||| ||||||||
Sbjct 1177833 CTCAAACACATCGCCATGCCACGGCTCGAGGTAGATGGCGAACGCACCGGGACGCTTGTT 1177774
Query 245158 GCCTCCCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTA 245213
||| |||||||||| ||| | || || |||| ||| ||||| | || || |
Sbjct 1177773 GCCGCCCTGGTCCA-CATAC---CGGGCCGTGTTGTTGTAGACACGCAGCATCGGAACCA 1177718
Query 245214 TGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGA 245273
||||| ||| ||||| |||||| ||||| | ||||| ||| || | | |
Sbjct 1177717 ACCCGTTGGAGATACCGTTCGTGCCCGCAATGTACGTACCCTTCGCCCGGATGCAGTGCA 1177658
Query 245274 TGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTG 245333
| || || | || |||||| ||||||||| || ||||| ||| | |||||
Sbjct 1177657 CGTTCAGACCAATGCCTCCGGCGGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGT 1177598
Query 245334 CTATGCCCTCCATGCT---GTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGG 245390
|| ||||| || || ||||||| || ||| || ||||||||||| ||||| ||||
Sbjct 1177597 AAATTCCCTCGATACTGTCGTCCGACATC--GTT-AGGAGAAAGCAGGACGACAGTTGGG 1177541
Query 245391 GCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGA 245450
|| | || || |||| || || |||||| |||||||| || ||| |
Sbjct 1177540 GCCGCTGCGTGGCCGCCGCAAACATGGTCGGCGAGGCGTGCGTAAAGTATCGCTCCGAAA 1177481
Query 245451 GGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACC 245510
| || |||||| | || || ||||||| |||||||||||| | ||| |
Sbjct 1177480 GCAAATTGTACGTTTCGATTGCCGCATCGATGTCCTCGCCGTGGATCCCGATGGCAACGC 1177421
Query 245511 TCATGAGGGTGTGCTG-GGGCGT--CTCGATGGGTCCCTCGGGTCCCTTGAGCATGTAGG 245567
||| || ||||||| || ||| |||| |||| | ||| |||| |||||
Sbjct 1177420 GCATCAGCATGTGCTGCGGTCGTTCGACGATCTTGCCCTTG---ATCTTCAGCAGGTAGG 1177364
Query 245568 AGCGCTCGAGCGTCTTGAACCCAAAGTACGAGTAGCCAAAGTCG 245611
| || |||||||| ||||| ||||| || ||| |||||||||
Sbjct 1177363 ACCGTTCGAGCGTTTTGAAGCCAAAATAATTGTACCCAAAGTCG 1177320
>seq9254
Length=4138565
Score = 192 bits (212), Expect = 1e-43
Identities = 309/438 (71%), Gaps = 11/438 (3%)
Strand=Plus/Minus
Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668
|||||||| ||||| || ||| | || || | ||||||||||| |||||||| || |||
Sbjct 2197472 CTGTTCAATGCCATCGAAACGCTACCGTGTGTGAAGAAGAAGGCTGACTGGGCACTGAAC 2197413
Query 42669 TGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAG 42728
||||| ||| | || | ||||||||| | | || || ||| |||||||||||
Sbjct 2197412 TGGATTTCGAGCAAGAAAGCCAACTTCGGCGAGCGTGTTGTCGCGTTTGCCGCCGTCGAG 2197353
Query 42729 GGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGAT 42787
|| || |||||| ||| ||| ||| | ||||||||||| ||| || ||| | |||
Sbjct 2197352 GGAATTTTCTTCAGCGGCAGCTTTGCCGCTATCTTCTGGCTTAAGAAGCGAGGACT-GAT 2197294
Query 42788 GCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTT 42847
||| || | |||||||||||||| || || | |||||||| |||| | |||||
Sbjct 2197293 GCCAGGCTTGACCTTCTCGAACGAGCTGATTTCGCGTGACGAGGGCTTGCACTGTGACTT 2197234
Query 42848 TGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGC 42907
||| ||||| ||||| | |||| || ||||| || ||||| || | |
Sbjct 2197233 TGCTTGCCTTATGTTC---AAATACCTGGTTCAAAAGCCGACGCGCGAGCGTGT---GAC 2197180
Query 42908 CATCATCA--CG-GAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGT 42964
| ||||| || || || |||| ||||| |||||||||| || || ||||||| ||
Sbjct 2197179 TAGCATCATTCGCGATGCGGTGGTAATCGAACAGGAGTTCCTTACCAAGGCGCTGCCAGT 2197120
Query 42965 GTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCA 43024
|| | ||||||||| ||||| |||| |||||||| ||| ||| |||||||
Sbjct 2197119 CGATATGCTGGGCATGAACTGTGACCTGATGTCGCAGTACATCGAGTTCGTTGCCGACCG 2197060
Query 43025 TCTCCTGTGCCAGATGGG 43042
|| ||| | || ||||
Sbjct 2197059 GCTGCTGGTCGAGTTGGG 2197042
Score = 104 bits (114), Expect = 4e-17
Identities = 177/253 (70%), Gaps = 8/253 (3%)
Strand=Plus/Minus
Query 42335 CTGGACCGCCGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA 42394
|||||| | |||||| | ||||| | ||||||| | | ||||||||| || |||
Sbjct 2197825 CTGGACGGTAGAGGAGGTAGACCTCTCGAAGGACATGAAGGACTGGGAGTC---GT-TGA 2197770
Query 42395 GAACGA---AAAGTTT-TTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCA 42450
| ||| || || ||| || || | || || ||||||||||| || ||||| |
Sbjct 2197769 AACCGAGCGAACGTCACTTCATCTCGCACGTGCTCGCTTTCTTCGCCGCATCGGACGGAA 2197710
Query 42451 TAGTCAATGAGAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCT 42510
| ||||| ||||| |||| | | |||| | || |||||| || |||||||
Sbjct 2197709 TCGTCAACGAGAATCTGGTCGAACGATTCAGCCAGGAAGTGCAGGTGACCGAAGCGCGCT 2197650
Query 42511 GCTTCTACGGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGC 42570
||||||| || |||||||| || || || ||||| ||| ||| ||||| || |||
Sbjct 2197649 GCTTCTATGGTTTCCAGATCGCGATGGAAAACGTCCACAGCGAGATGTACTCCCTGCTGA 2197590
Query 42571 TCAACACGTACAT 42583
|| ||||||||||
Sbjct 2197589 TCGACACGTACAT 2197577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944225973729920
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