Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq9254 123 3e-23
seq9207 107 2e-18
seq9243 104 3e-17
seq9217 93.3 5e-14
>seq9254
Length=4138565
Score = 123 bits (136), Expect = 3e-23
Identities = 281/413 (68%), Gaps = 10/413 (2%)
Strand=Plus/Minus
Query 8526 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAG 8585
|| || ||||| | |||||| | | || || || |||| | || || ||||| |
Sbjct 2756672 TACCAGGCATCCACTTCGGAGCTTTACGGCAAGGTGGTGGAAACGCCACAGAATGAAAAA 2756613
Query 8586 ACACCCTTCTATCCACGATCCGTCTATGGCGTCT-CAAAGGT-TGCGGCACATTGGCTCG 8643
|||||||||||||| || || || | | | | | ||| | | |||| | ||| | |
Sbjct 2756612 ACACCCTTCTATCCGCGTTCGCCGTACG-CTTGTGCCAAGATGTACGGCT-ACTGGATTG 2756555
Query 8644 TGAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACG 8703
||| |||||||| ||| | || | | ||||| ||| || ||||| || |||||||
Sbjct 2756554 TGATAAATTACCGCGAAGCGTACGACATGTTTGCCTGCAATGGCATTCTTTTTAACCACG 2756495
Query 8704 AGTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACC--GATGGTATCAAACA 8761
|||| || || || || | |||| || || ||||| ||| | || | ||
Sbjct 2756494 AGTCTCCGCGGCGGGGAGAGAATTTTGTCACCCGCAAGATAACCCGGTCAGTGGCGAA-- 2756437
Query 8762 AATCGTCGCG-GGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACT 8820
|||| |||| || || ||||| | | || |||| || || || || || | ||||
Sbjct 2756436 AATC-TCGCTTGGCCAGCAGGAGTGCTTGGAGCTGGGCAATCTTGACTCCAAGCGTGACT 2756378
Query 8821 GGGGACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGAGGCGG 8880
|||| || ||||| ||||| || || ||||||||||| | | || || || | |||
Sbjct 2756377 GGGGGCATGCCAAAGACTACGTGGAGGCCATGTGGCTAATGATGCAGCAGGACAAACCGG 2756318
Query 8881 ACGAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 8933
| || | |||| |||| || |||||||| ||||| || ||||||| || |||
Sbjct 2756317 AAGATTTTGTCATCGCCACTGGGGAGACGCACTCGGTGCGGGAGTTTGTGGAG 2756265
>seq9207
Length=1443628
Score = 107 bits (118), Expect = 2e-18
Identities = 730/1162 (63%), Gaps = 19/1162 (2%)
Strand=Plus/Minus
Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656
|| || |||||||| |||||||| || ||| ||||||| | || | || ||||| | |
Sbjct 1179122 CGCAGATAGTACATGCCCGTCTTCAGGCCCATCTTCCAGCCGTAGAAGTGAATCGACGTC 1179063
Query 113657 AACTTGGAG-AGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 113715
| |||| | ||| | || ||| | | ||| | ||||| |||||||||||
Sbjct 1179062 AGCTTGCCGTAGT-TCGGTTCGGCCACGTGAATGTTGAACGACTGGGACTGATCGATGAA 1179004
Query 113716 GCGTCCACGATCCGCCGCCATATCAAT-CACATCCTTCATCTTGATTTCCCACACAGTTC 113774
|| || ||||| ||||| | || ||| | |||| | || |||||||| ||
Sbjct 1179003 CGCACCCCGGTCCGCGGCCATTTTGATGCACGTT-TTCACCGATATCTCCCACACCGTCT 1178945
Query 113775 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCT 113834
|||| |||| || | | || || ||| |||| || || || || |
Sbjct 1178944 TGTACAGGTCGCGGATGTGCTGCGGAATTTCCTCGATCCGCTGTATCGAACCGTTGTGCG 1178885
Query 113835 TGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGA 113894
| || | | ||||||||| | ||| || || | | | ||||||| || |
Sbjct 1178884 CAAGGATTTGGTTCTTCATATCGTCATCCCACAGGCCGAGTTCGGTCAGATCCTGCAGCA 1178825
Query 113895 GATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCG 113954
|||| | ||||| || ||||| |||| || ||| | |||| || | |
Sbjct 1178824 GATGGTGGTTGACCACCTGGAACTCGCCCGACAGCACGCGCCGATTGTAGACGTTCGAAG 1178765
Query 113955 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGG 114014
|||| ||||| || |||| ||||| |||| |||||||| |||||||| || ||||| |
Sbjct 1178764 TGTACGGCTCGAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGCATCG 1178705
Query 114015 GTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCC 114074
|||||| || || || |||| ||| | | ||| |||||| || || |||
Sbjct 1178704 GTGCCAGCAGGAGCGAATTCCGGATACCATGCTTGGCAATCTTTTCCTTCAGCTCGGCCC 1178645
Query 114075 AGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGG 114134
||| | | | ||| | || |||||| || |||| ||||| || | |
Sbjct 1178644 AGTTCCACAGGTCCGTTGGGGTCTTCTCCCACATGTCGTACTGCAGGATTCCCTTGCTCA 1178585
Query 114135 CTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCT 114194
| || | ||||| | || ||||| || || || | ||||| || |||| ||||
Sbjct 1178584 CCGGACAGCCCTCGTACGTTTCGTACGGACCGTCGCGGGCGGCCAACTCACAGCTAGCCT 1178525
Query 114195 CGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGG--CCTCGTC 114252
| || || | | || || |||||||| || | |||| || || | | || ||
Sbjct 1178524 CCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCA--GCTTTTGTGCTTCCTC 1178467
Query 114253 GGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCC 114312
|| ||| | || | ||| || |||| || | || || || |||| ||
Sbjct 1178466 ACTTTCGTACGGATGGCGCATGAGAATGAACGCATCGGCCATTCCCTGCACGCCGATACC 1178407
Query 114313 AATTGGGCGATGTCTCATATTAGACT--TTCGAGCGGTCTCCACGGGATAAAAATTCCTA 114370
|| || || || | ||| || || |||| | | ||| || || | || |
Sbjct 1178406 GATAGGTCGGTGGCGCATGTTGGAACGCTTCG--CCTCCGGCACCGGGTAGTAGTTGATG 1178349
Query 114371 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAA 114430
||||| | | || || || ||||| | ||| | || || | ||||| || |
Sbjct 1178348 TCGATGATTTTGTTCAGGTTGCGCGTGACGATCTTGGCGACCTCCTTCAGCTTCACGAAG 1178289
Query 114431 TCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACAC 114490
|| | ||||| || | ||| || | || || || ||||||||||| |||
Sbjct 1178288 TCGTACGTGCGA---TCCGGCCTCACAAACATGTTCAGCGCAATCGACGCCAGATTGCAC 1178232
Query 114491 ACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTA 114550
|| | | || ||||| | |||||| | || ||||| |||| || || | |||
Sbjct 1178231 ACCGCAATTTCGTCCTTCGACGAGTACTCGACGATCTCCGTGCACAGGTTCGAGCACTTG 1178172
Query 114551 ATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTAT 114610
|| ||||||| ||||| || || ||| ||| |||||||||||||| ||||||||
Sbjct 1178171 ATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCCTTGTAGAGCATGTAC 1178112
Query 114611 GGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACAT-CGGCGGCTGGCAC 114669
||| |||||||| || |||| || || || ||| | || | ||| || |||
Sbjct 1178111 GGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAACCACAGATCCTGCGCCT-TCAC 1178053
Query 114670 AGTGGC-GTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCAC 114728
|| | | || || || |||| |||||| ||||| || ||||||||||| |
Sbjct 1178052 -CTGCCGGATGAACCGACCTTCCTTCTCGTAGCCCGTGTACAGCCGCTCAAACTCTTCGC 1177994
Query 114729 CCACGGCCTCTGAGAGCCCTGG 114750
|| | ||| || ||||| ||
Sbjct 1177993 CCCACGACTCCGACAGCCCGGG 1177972
>seq9243
Length=2754563
Score = 104 bits (114), Expect = 3e-17
Identities = 283/423 (67%), Gaps = 24/423 (6%)
Strand=Plus/Plus
Query 10780 GATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTT 10839
||||| ||||| |||||||| ||||| ||||| || | ||| ||||| || | |||||
Sbjct 2616413 GATCTGCCGATCGAAGCGACCGGGGCGAAGGAGCGCCTTGTCTAGGATGTCCACCCGGTT 2616472
Query 10840 CGTCGCCGCGATGACAACGATGCCCGTC-TCGTTATCAAAGCCATCCATCTCAGTCAAG- 10897
||| ||||| | || || | |||| |||| || || || |||||||| | | ||
Sbjct 2616473 CGTTGCCGCCAGCACGACCACATTCGTCGTCGT-ATTGAATCCGTCCATCTC-GACGAGC 2616530
Query 10898 AGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGCATACCACCC--GCACT----G 10951
|| || |||| || |||| || | | ||| ||||| || || |
Sbjct 2616531 AGCTGGTTGAGCGT--------GTTC-TCTTGCTCGGAGTGTCCACCGAAGCTCTTCCCG 2616581
Query 10952 CGTTGCTT---ACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCA 11008
| |||| ||| |||||||| |||||||||||||| | || |||||| |||||
Sbjct 2616582 CCACGCTTTCGACCTACGGCGTCGATTTCATCGATGAACAAAATGCACGGTGCATTTTTG 2616641
Query 11009 CGGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACA 11068
|| || | | || ||||| || || | | | ||||||||| ||||||||||||| |
Sbjct 2616642 CGCGCCATGGCGAACATATCGCGCACACGCGACGGACCGACACCGACAAACATTTCCAAA 2616701
Query 11069 AAATTGGCGGCGGA-ACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGC 11127
|| | | | || || | |||||| || ||||| | ||| || ||| | || ||
Sbjct 2616702 AACTCCGATCCCGACACGGT-GATGAACGGTACGTTCGCTTCCCCAGCGGTCGCCTTCGC 2616760
Query 11128 GAGGAGGGTCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGC 11187
||| || || || || || || ||| || | || | |||||| ||||| | ||
Sbjct 2616761 GAGAAGCGTTTTTCCGGTACCGGGTGGGCCAGTCAGCATGGCACCTTTGGGGATTTTCGC 2616820
Query 11188 ACC 11190
|||
Sbjct 2616821 ACC 2616823
>seq9217
Length=1236993
Score = 93.3 bits (102), Expect = 5e-14
Identities = 287/435 (66%), Gaps = 18/435 (4%)
Strand=Plus/Plus
Query 171728 CCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGAAG 171787
|| || || ||||| |||| |||||||| || | ||| |||| | |||| ||| ||
Sbjct 55686 CCGGTACCGATACCGTCGGCACCGTTCACCAGTAGCATCGGAATGATGGGCAGATACCAG 55745
Query 171788 TCTGGTTCAATCGCACGCCCATCATCATCCAAATAGTT---GAGCACGGGGTCGTCCCTC 171844
||||||| || ||| || || || | | || ||||| || |||||| |
Sbjct 55746 ACTGGTTCGATG---CGCTGATTGTCCTCGTACTGGTACGCGAGCAGCGGATCGTCCAGC 55802
Query 171845 GGATCAAAGATTTTACGAGCATCCTTGGTGA--GTTTTGTGAAGATGTACCTCGTTTGAG 171902
|||| ||||| || | || | || | | ||||||||||| | || ||
Sbjct 55803 GGATGGAAGATGCAGCGCG--TCAGGGCCGACAGCATGGTGAAGATGTAACGCGGGCTAG 55860
Query 171903 ACGCA-TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGATTG 171961
||| || |||||||| | | ||||| || || ||||| | ||| | || ||||||
Sbjct 55861 -CGCTGTCCTTGCCACCGGTCAACCGCGTACCGAACTGACCGCCCGGGTACAGCAGATTG 55919
Query 171962 ATATTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCG-AGGGAGAC 172020
|| || || || | ||||| | ||||| || || ||||| || | || | |||
Sbjct 55920 ATGTTATTACTGCCGACGTAGTTCTGCGCCAAGTTAACGATCGT---CGAGCAGAGCGAC 55976
Query 172021 T--TCACCGTGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAACTGTGCCACCTTC 172078
| || ||||||||||| || ||| | ||||| || | | |||| ||| |||||||||
Sbjct 55977 TGCTCGCCGTGATGGTATGCGGACATTTCCGCCACCGAACCGGCCAGCTGGGCCACCTTC 56036
Query 172079 ATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTG 172138
| ||| |||| ||| | |||||| | ||| ||||| | ||| |||||
Sbjct 56037 ACCTCGCGCTTGTCGTTACGCTTGAAGCAGGTGAACAGCACCTTCCGCTGGCCCGGCTTC 56096
Query 172139 AGGCCGTCGGCCATG 172153
|| |||||| ||||
Sbjct 56097 AGCCCGTCGAGCATG 56111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597281977303360
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