Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq9233 93.3 5e-14
seq9175 93.3 5e-14
seq8743 93.3 5e-14
seq8679 93.3 5e-14
seq9240 91.5 2e-13
seq9245 89.7 6e-13
seq8994 89.7 6e-13
seq9210 87.8 2e-12
seq8936 87.8 2e-12
seq1640 87.8 2e-12
seq8778 86.0 7e-12
>seq9233
Length=3601930
Score = 93.3 bits (102), Expect = 5e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063
||||||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct 548863 TTTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 548922
Query 57064 CTATACTACCGAGGAT 57079
|||||||| |||||||
Sbjct 548923 CTATACTATCGAGGAT 548938
Score = 93.3 bits (102), Expect = 5e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063
||||||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct 550102 TTTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 550161
Query 57064 CTATACTACCGAGGAT 57079
|||||||| |||||||
Sbjct 550162 CTATACTATCGAGGAT 550177
Score = 93.3 bits (102), Expect = 5e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062
|||||||| || | | |||||||||| ||||||||||||||||||||| ||||| |||
Sbjct 551275 TTTTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 551334
Query 57063 ACTATACTACCGAGGA 57078
||||||||| ||||||
Sbjct 551335 ACTATACTATCGAGGA 551350
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 548396 TCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 548455
Query 57066 ATACTACCGAGGA 57078
|||||| ||||||
Sbjct 548456 ATACTATCGAGGA 548468
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064
|||||| || | | |||||||||| || |||||||||||||||||| ||||| |||||
Sbjct 550811 TTCTCCCCGACGGGGAATCGAACCCCGGCCTCCCGCGTGACAGGCGGGGATACTGACCAC 550870
Query 57065 TATACTACCGAGGA 57078
||||||| ||||||
Sbjct 550871 TATACTATCGAGGA 550884
>seq9175
Length=308091
Score = 93.3 bits (102), Expect = 5e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063
||||||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct 119309 TTTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 119368
Query 57064 CTATACTACCGAGGAT 57079
|||||||| |||||||
Sbjct 119369 CTATACTATCGAGGAT 119384
>seq8743
Length=814231
Score = 93.3 bits (102), Expect = 5e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063
||||||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct 132547 TTTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 132606
Query 57064 CTATACTACCGAGGAT 57079
|||||||| |||||||
Sbjct 132607 CTATACTATCGAGGAT 132622
>seq8679
Length=336329
Score = 93.3 bits (102), Expect = 5e-14
Identities = 73/86 (85%), Gaps = 1/86 (1%)
Strand=Plus/Plus
Query 56995 ATGAAAAAT-TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 57053
|| |||| | ||||||| || | | |||||||||| |||||||||||||||||||||
Sbjct 62472 ATAAAAAGTATTTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGG 62531
Query 57054 ATACTCACCACTATACTACCGAGGAT 57079
||||| |||||||||||| |||||||
Sbjct 62532 ATACTGACCACTATACTATCGAGGAT 62557
>seq9240
Length=943838
Score = 91.5 bits (100), Expect = 2e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053
|||| ||||| ||| | || |||||| ||||| ||||| || | ||| || || |
Sbjct 630369 CGCAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGTCCA 630428
Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113
|| || |||||||| || ||||| || || ||||||||||| | || | || |||||||
Sbjct 630429 TCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTG 630488
Query 42114 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 42173
||| ||| || || | || | | ||| || | || || || | || |||
Sbjct 630489 TCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATG 630548
Query 42174 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211
|| || ||||| || || || || ||||| ||||| ||
Sbjct 630549 GTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTT 630586
>seq9245
Length=1646812
Score = 89.7 bits (98), Expect = 6e-13
Identities = 69/82 (84%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
|| || || |||| || | | |||||||||| ||||||||||||||||||||| ||||
Sbjct 255706 AATAACTTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 255647
Query 57058 TCACCACTATACTACCGAGGAT 57079
| |||||||||||| |||||||
Sbjct 255646 TGACCACTATACTATCGAGGAT 255625
>seq8994
Length=320926
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064
|||||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||
Sbjct 247405 TTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 247464
Query 57065 TATACTACCGAGGA 57078
||||||| ||||||
Sbjct 247465 TATACTATCGAGGA 247478
>seq9210
Length=250497
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062
|| ||||| || | | |||||||||| ||||||||||||||||||||| ||||| |||
Sbjct 49909 TTCTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 49850
Query 57063 ACTATACTACCGAGGA 57078
||||||||| ||||||
Sbjct 49849 ACTATACTATCGAGGA 49834
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063
|| |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct 51658 TTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 51599
Query 57064 CTATACTACCGAGGA 57078
|||||||| ||||||
Sbjct 51598 CTATACTATCGAGGA 51584
>seq8936
Length=1869526
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 385878 TCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 385819
Query 57066 ATACTACCGAGGA 57078
|||||| ||||||
Sbjct 385818 ATACTATCGAGGA 385806
>seq1640
Length=1046
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063
|| |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct 459 TTACTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 518
Query 57064 CTATACTACCGAGGAT 57079
|||||||| |||||||
Sbjct 519 CTATACTATCGAGGAT 534
>seq8778
Length=62753
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 61927 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 61986
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 61987 TACTATCGAGGA 61998
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543147668785280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |