Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq8738 125 7e-24
seq9207 120 3e-22
seq8899 105 7e-18
seq9240 104 2e-17
>seq8738
Length=1280009
Score = 125 bits (138), Expect = 7e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||||| | ||| || ||||| | || || || || || ||||||||||| |
Sbjct 1177206 ACCACCGCGCAGACGAAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGA 1177265
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| || | ||||| ||||||||||||||| | ||||| |||||||| || |||||
Sbjct 1177266 AAGGGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGG 1177325
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||| || || || || || || ||| ||| ||| | || || | || ||
Sbjct 1177326 GATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCTCAAC 1177385
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|| | || | |||||| || |||| || || |||||||||||||||
Sbjct 1177386 CTCCAACGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAAATTTGCATT 1177434
Score = 114 bits (126), Expect = 1e-20
Identities = 165/233 (71%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| ||||||| | ||| || ||||| | || || || || || ||||||||||| |
Sbjct 1177435 CCACCGCGCAGACGAAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGAA 1177494
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| || || | ||||| ||||||||||||||| | ||||| |||||||| || |||||
Sbjct 1177495 AGAGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGG 1177554
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
||||| || || || || || || ||| ||| ||| | || || | |||||
Sbjct 1177555 ATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCTCCACC 1177614
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAAT 64449
|| | || | |||||| || || | || || |||||||| ||||| || ||
Sbjct 1177615 TCCAACGTGATGGTCTTTCCCGTAAGGGTCTTGACGAAAATCTGCATCTTGAT 1177667
Score = 93.3 bits (102), Expect = 4e-14
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|| ||||| ||| | | || |||||||| || | | | | ||| | ||||||||||||
Sbjct 1179142 TGCATCGTTGATCCGTGCTGGATGTTGTAGTCGGAAATGATCCGCCCATCTTCAAGCTGC 1179201
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|| || || | |||| ||||||||||| || | || || ||| |||| |||||
Sbjct 1179202 TTTCCCGCGAAGATGATACGCTGCTGGTCCGGTGCTATACCCTCTCGCTCTTCGATTTTG 1179261
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
|||| | || || || || ||| | || |||| || | ||||||||||||
Sbjct 1179262 CTTTTTATATCCAAGACCGTCTCGGAGGCCACGACGTCTAGCGTGATCGTCTTGCCGGTC 1179321
Query 64421 AAAGTTTTTACGAAAATTTGCATTTT 64446
| || || || ||||||||||||||
Sbjct 1179322 AGTGTCTTCACAAAAATTTGCATTTT 1179347
>seq9207
Length=1443628
Score = 120 bits (132), Expect = 3e-22
Identities = 541/847 (64%), Gaps = 13/847 (2%)
Strand=Plus/Minus
Query 154587 GACGCCAAGTTGCAAACGGCAATTTCTTCAGAACTACT-GTATTGCACAATTTCTGCGCA 154645
||||||| ||||| || |||||||| || | || ||| | || || || | |||
Sbjct 1178246 GACGCCAGATTGCACACCGCAATTTCGTCCTT-CGACGAGTACTCGACGATCTCCGTGCA 1178188
Query 154646 CAAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTC 154705
|| || ||| || ||||||| ||| | ||| || || |||||| || ||
Sbjct 1178187 CAGGTTCGAGCACTTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATC 1178128
Query 154706 TTTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTGTGCGAAACAG 154765
||||| | |||||||| |||||| || || || | || || || | |||| ||
Sbjct 1178127 CTTGTAGAGCATGTACGGCACGCCCGTCTCGACCTGCGACTCGATGATCG--CGAACCAC 1178070
Query 154766 ACTTC--GCGCCTCAACTTGACAAGTAAATCGATTTTCGCTCTCATATTGTTCGTACAGT 154823
| || |||||| || || | | || ||| ||| |||| || ||||||
Sbjct 1178069 AGATCCTGCGCCTTCACCTGCCGGATGAACCGACCTTCCTTCTCGTAGCCCGTGTACAGC 1178010
Query 154824 TTTTCAAACTCTAAACTGTACACGTCCGACAAACCGGGACAGCGGTCGGGACACATCAAT 154883
||||||||| | || ||||||| ||||| ||| || |||||||| |
Sbjct 1178009 CGCTCAAACTCTTCGCCCCACGACTCCGACAGCCCGGGGCAGTCGTGCGGACACATAAGG 1177950
Query 154884 GACCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTAC 154943
|||||||||||| | || || ||||| |||| |||||||||||||| |||||
Sbjct 1177949 CTCCACATTTCGTTCGCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAGCGCGTAG 1177890
Query 154944 AACAAATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAAAATCA 155003
|||| |||||||| || || ||| ||||| ||| | || | ||| |||
Sbjct 1177889 AACATGTCACGCGCACGGACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGAAACTCA 1177830
Query 155004 TATATGTCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCCTTTGCG---TTTTCCT 155060
| | ||| | ||||||||||| | || | ||| | ||| || || || ||
Sbjct 1177829 AACACATCGCCATGCCACGGCTCGAGGTAGATGGCGAACGCACCGGGACGCTTGTTGCCG 1177770
Query 155061 CCTTGATCCACGTGACGCACACAATTATTGTACACGCGCAACAATGGTTCCACGCCGCTG 155120
|| || ||||| | || | || ||||| || |||| || || ||| ||| ||
Sbjct 1177769 CCCTGGTCCACATACCGGGCCGTGTTGTTGTAGACACGCAGCATCGGAACCAACCCGTTG 1177710
Query 155121 GCCGTGCCGTTGGTGCCACGTATCGCGC-TGCCGCGAGCACGCGCTTTA-TGAACATTAA 155178
| | ||||| ||||| || | | | | || || || | | | || || || |
Sbjct 1177709 GAGATACCGTTCGTGCC-CGCAATGTACGTACCCTTCGCCCG-GATGCAGTGCACGTTCA 1177652
Query 155179 CGCCCAAACCTCCGCCGTATTTAGATATTTGCGCACAGTCCGCCAAAGTTTCGTACATTC 155238
|| | |||||| || | || || || | || || | | || || ||||| ||||
Sbjct 1177651 GACCAATGCCTCCGGCGGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAAATTC 1177592
Query 155239 CTTTGATGCTGTCTTCTTTCAACGTCAACAAGAAACACGAAGATAATTGAGGTTGAGGGC 155298
| | ||| ||||| || || ||| | | || || || || | ||| || | |
Sbjct 1177591 CCTCGATACTGTCGTCCGACATCGTTAGGAGAAAGCAGGACGACAGTTGGGGCCGCTGCG 1177532
Query 155299 AGCCGGCCGCAAATAATGTAGGACTAGCGTGTGTAAACATTTTGTTGGCGGTTAAGTTGT 155358
| | |||||||| | || || ||||| ||||| | | | || ||||
Sbjct 1177531 TGGCCGCCGCAAACATGGTCGGCGAGGCGTGCGTAAAGTATCGCTCCGAAAGCAAATTGT 1177472
Query 155359 AAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCATCAGCA 155418
| |||||||| || || || ||||| ||||| || ||||| || |||||||||||||
Sbjct 1177471 ACGTTTCGATTGCCGCATCGATGTCCTCGCCGTGGATCCCGATGGCAACGCGCATCAGCA 1177412
Query 155419 TGTGTTG 155425
|||| ||
Sbjct 1177411 TGTGCTG 1177405
Score = 84.2 bits (92), Expect = 2e-11
Identities = 205/311 (66%), Gaps = 0/311 (0%)
Strand=Plus/Minus
Query 154071 GTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATA 154130
||| ||||||||||||| ||||||||||| | ||||| || || | || || |||||
Sbjct 1178765 GTGTACGGCTCGAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGCATC 1178706
Query 154131 TACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCC 154190
|||| || | || || || | ||| || || ||||| || | || |||
Sbjct 1178705 GGTGCCAGCAGGAGCGAATTCCGGATACCATGCTTGGCAATCTTTTCCTTCAGCTCGGCC 1178646
Query 154191 CAATTCCACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTC 154250
|| ||||||| || || || | | |||||||||||| |||| | ||| |||
Sbjct 1178645 CAGTTCCACAGGTCCGTTGGGGTCTTCTCCCACATGTCGTACTGCAGGATTCCCTTGCTC 1178586
Query 154251 GCCGGACTGTCACTATAACTAGAGTACGGCCCGTTCAGTTTTGCCAAGTCGCAACTGGCT 154310
|||||| | | || | |||||| |||| | ||||| || || || ||
Sbjct 1178585 ACCGGACAGCCCTCGTACGTTTCGTACGGACCGTCGCGGGCGGCCAACTCACAGCTAGCC 1178526
Query 154311 TCTAACGCCGCATAGTATACGGTTTCGGCAATTTGTTTGTTTAACATTTTGGCTTTGTCA 154370
|| | || ||||||| | ||| || || || | ||| | | ||| |||| |||
Sbjct 1178525 TCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCAGCTTTTGTGCTTCCTCA 1178466
Query 154371 CTTTCGTACGG 154381
|||||||||||
Sbjct 1178465 CTTTCGTACGG 1178455
>seq8899
Length=3132144
Score = 105 bits (116), Expect = 7e-18
Identities = 164/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | || || || || |||| ||||| || || ||||||||||| || |
Sbjct 384452 ACCACCACGAAGTCGCAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCGA 384511
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || || | || || |||||||| ||||| | || || ||||| || || || ||
Sbjct 384512 AAGCGTACGGCCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGTTGATCTGGCGG 384571
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTAT-CACCGGCGTCCA 64394
||||||||| || || || ||||| ||| ||| ||| | || | | |||| || |
Sbjct 384572 AATTCCTTCCTTATCCTGAATTTTCGCCTTCACATTCTCGATCGTGTCCGACGGC-TCGA 384630
Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
| || | || | ||||||||| || | ||||| |||||||| ||||| ||
Sbjct 384631 CCTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACGAAAATCTGCATCTT 384682
>seq9240
Length=943838
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| ||||| | ||||| || || ||||||||||| || | | ||||| | ||
Sbjct 630372 AGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGTCCATCC 630431
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||||||||| | || || ||||||||||| || || || || || || ||
Sbjct 630432 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 630491
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| ||| | ||||| || || || || | || | ||||
Sbjct 630492 TGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTC 630551
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| || || | ||||| ||||| || ||||| ||
Sbjct 630552 TTACCCGTGAGGGTTTTGACGAAGATCTGCATCTT 630586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499584892588480
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