Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 309 3e-79
>seq9207
Length=1443628
Score = 309 bits (342), Expect = 3e-79
Identities = 1080/1666 (65%), Gaps = 55/1666 (3%)
Strand=Plus/Plus
Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777
||| |||| |||| ||||||||| || || ||| ||||| || ||||| | |||| |
Sbjct 1177330 TACAATTATTTTGGCTTCAAAACGCTCGAACGGTCCTACCTGCTGAAGATCAAGGGCAAG 1177389
Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837
| ||| |||||||| || ||||||||||||| ||||||||||| |||||| | |||
Sbjct 1177390 ATCGTCGAACGACCGCAGCACATGCTGATGCGCGTTGCCATCGGGATCCACGGCGAGGAC 1177449
Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAG--ACA---TGCGGGACAAGAGGTA---TACCA 93889
|| ||| ||||| | | | ||| ||| || | || |||
Sbjct 1177450 AT--CGA------TGCGGCAATCGAAACGTACAATTTGCTTTCGGAGCGATACTTTACGC 1177501
Query 93890 TGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCC 93949
||| | |||||| |||| |||| || | | ||| || |||| || || || |
Sbjct 1177502 ACGCCTCGCCGACCATGTTTGCGGCGGCCACGCAGCGGCCCCAACTGTCGTCCTGCTTTC 1177561
Query 93950 TGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGA 94009
| | |||| || |||| ||| ||||||| ||||| || ||| | || ||
Sbjct 1177562 TCCTAACGATGTCGGACGACAGTATCGAGGGAATTTACGACACGCTGAAGCAGTGCGCAC 1177621
Query 94010 CCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTT 94069
||||| || | ||| || || || || | | || ||| | | || || | ||||
Sbjct 1177622 TGATCTCCAAGTCCGCCGGAGGCATTGGTCTGAACGTGCACTGCATCCGGGCGAAGGGTA 1177681
Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129
| ||||| || || || || | ||||||||| | || || ||||| || |||| ||
Sbjct 1177682 CGTACATTGCGGGCACGAACGGTATCTCCAACGGGTTGGTTCCGATGCTGCGTGTCTACA 1177741
Query 94130 ACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCT 94189
||||| |||| || || ||||||||||| || | | | ||| | ||||| |||
Sbjct 1177742 ACAACACGGCCCGGTATGTGGACCAGGGCGGCAACAAGCGTCCCGGTGCGTTCGCCATCT 1177801
Query 94190 ATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249
| |||||||| ||||| | || ||| | || |||| ||| || ||| ||||
Sbjct 1177802 ACCTCGAGCCGTGGCATGGCGATGTGTTTGAGTTTCTCGATCTGAAGAAAAACACTGGCA 1177861
Query 94250 ACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309
| || || | || | ||| | |||||||| || |||||||| || || || ||||
Sbjct 1177862 AGGAGGAGGTCCGTGCGCGTGACATGTTCTACGCGCTGTGGGTGCCGGATCTGTTCATGA 1177921
Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT 94369
| || || ||| ||| ||||| ||| | ||||| | || || ||||| ||||
Sbjct 1177922 AGCGGGTGGAGGCGAACGAAATGTGGAGCCTTATGTGTCCGCACGACTGCCCCGGGCTGT 1177981
Query 94370 CCGACGTTTGTGGATCGCGT--TTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAA 94427
| || | |||| || ||||| |||| | | ||||| | | ||
Sbjct 1177982 CGGAG--TCGTGGGGCGAAGAGTTTGAGCGGCTGTACACGGGCTACGAGAAGGAAGGTCG 1178039
Query 94428 GGCCA---GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGT 94484
| || || |||| | || || |||| |||||| |||| | || |||||
Sbjct 1178040 GTTCATCCGGCAGGTGAAGGC-GC-AGGAT-CTGTGGTTCGCGATCATCGAGTCGCAGGT 1178096
Query 94485 GGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCA 94544
|||||||| ||| ||||| | | |||||| | |||| ||| |||||||||
Sbjct 1178097 CGAGACGGGCGTGCCGTACATGCTCTACAAGGATGCGTGCAACCGGAAGAGCAACCAGCA 1178156
Query 94545 GCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCC 94604
| || | || ||||||| ||||||| |||||||| ||||| |||||||| | ||
Sbjct 1178157 GAACGTGGGCACGATCAAGTGCTCGAACCTGTGCACGGAGATCGTCGAGTACTCGTCGAA 1178216
Query 94605 GGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGC 94664
|||||| ||||| ||||| || |||| || || ||| || || ||| | |
Sbjct 1178217 GGACGAAATTGCGGTGTGCAATCTGGCGTCGATTGCGCTGAACATGTTTGTGAGGCCGGA 1178276
Query 94665 CTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGT 94724
||||| || |||||| | ||| ||||| | | || ||| ||
Sbjct 1178277 TCGCACGT--ACGACTTCGTGA-AGCTGAAGGAGGTCGCCAA------------GATCGT 1178321
Query 94725 CTTG---AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAA 94781
| | |||||||||| | ||||||| |||| |||||| || ||||||||| ||
Sbjct 1178322 CACGCGCAACCTGAACAAAATCATCGACATCAACTACTACCCGGTGCCGGAGGCGAAGCG 1178381
Query 94782 CTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGT 94841
|| ||| || || || || ||||| |||||||| ||||| | || || ||| | |
Sbjct 1178382 TTCCAACATGCGCCACCGACCTATCGGTATCGGCGTGCAGGGAATGGCCGATGCGTTCAT 1178441
Query 94842 GATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGA 94901
| ||||| | || ||||| || || || |||| | | || || ||
Sbjct 1178442 TCTCATGCGCCATCCGTACGAAAGTGAGGAAGCACAAAAGCTGAACCAGCAGATCTTTGA 1178501
Query 94902 AAGCATTTATTACGGGGCCATGAAA-CAATCCGTCCACTTGGCCAGATCGGACGGCGGGC 94960
| ||| || || || || || | | | | || | |||||| | || || ||| |
Sbjct 1178502 GACCATCTACTATGGCGCTCTGGAGGCTAGCTGTG-AGTTGGCC-GCCCG--CGACGGTC 1178557
Query 94961 CACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGG 95020
| ||||| ||| | || | || || |||| || | |||| |||| | ||||
Sbjct 1178558 CGTACGAAACGTACGAGGGCTGTCCGGTGAGCAAGGGAATCCTGCAGTACGACATGTGGG 1178617
Query 95021 GTGTGAAGCCCTCGGGTCTGTACGACTGGGA--AGCTCTACGCGCTGATGTTATCAAACA 95078
|| || ||| |||| |||||| |||| | | ||| | ||| ||
Sbjct 1178618 AGAAGACCCCAACGGACCTGTGGAACTGGGCCGAGCTGAAGGAAAAGAT--TGCCAAGCA 1178675
Query 95079 CGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCT 95138
||| | || |||| || |||| || ||||| || ||||||||||| || || ||
Sbjct 1178676 TGGTATCCGGAATTCGCTCCTGCTGGCACCGATGCCGACCGCCTCCACGGCCCAAATTCT 1178735
Query 95139 TGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGC 95198
|||||||||||||||||||| || | ||| || ||||| ||||| |||| ||||| |
Sbjct 1178736 GGGCAACAACGAGTCGTTCGAGCCGTACACTTCGAACGTCTACAATCGGCGCGTGCTGTC 1178795
Query 95199 CGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTG 95258
|| || |||| || ||||| | || || || | ||| ||||| || || ||||
Sbjct 1178796 GGGCGAGTTCCAGGTGGTCAACCACCATCTGCTGCAGGATCTGACCGAACTCGGCCTGTG 1178855
Query 95259 GGGTGACAAGGTCAAGAACCAACTGCTACGCGC-CAACGGCTCCGTCCAGAACATCCCGC 95317
|| |||| | | ||||||||| | || |||| |||||| || | ||| ||| |
Sbjct 1178856 GGATGACGATATGAAGAACCAAATCCT-TGCGCACAACGGTTCGATACAGCGGATCGAGG 1178914
Query 95318 AAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGAT 95363
|||| ||| || ||||| | || |||||||| |||||||||||
Sbjct 1178915 AAATTCCGCAGCACATCCGCGACCTGTACAAGACGGTGTGGGAGAT 1178960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494663882688320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |