Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq9207 309 3e-79 >seq9207 Length=1443628 Score = 309 bits (342), Expect = 3e-79 Identities = 1080/1666 (65%), Gaps = 55/1666 (3%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| |||| |||| ||||||||| || || ||| ||||| || ||||| | |||| | Sbjct 1177330 TACAATTATTTTGGCTTCAAAACGCTCGAACGGTCCTACCTGCTGAAGATCAAGGGCAAG 1177389 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 | ||| |||||||| || ||||||||||||| ||||||||||| |||||| | ||| Sbjct 1177390 ATCGTCGAACGACCGCAGCACATGCTGATGCGCGTTGCCATCGGGATCCACGGCGAGGAC 1177449 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAG--ACA---TGCGGGACAAGAGGTA---TACCA 93889 || ||| ||||| | | | ||| ||| || | || ||| Sbjct 1177450 AT--CGA------TGCGGCAATCGAAACGTACAATTTGCTTTCGGAGCGATACTTTACGC 1177501 Query 93890 TGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCC 93949 ||| | |||||| |||| |||| || | | ||| || |||| || || || | Sbjct 1177502 ACGCCTCGCCGACCATGTTTGCGGCGGCCACGCAGCGGCCCCAACTGTCGTCCTGCTTTC 1177561 Query 93950 TGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGA 94009 | | |||| || |||| ||| ||||||| ||||| || ||| | || || Sbjct 1177562 TCCTAACGATGTCGGACGACAGTATCGAGGGAATTTACGACACGCTGAAGCAGTGCGCAC 1177621 Query 94010 CCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTT 94069 ||||| || | ||| || || || || | | || ||| | | || || | |||| Sbjct 1177622 TGATCTCCAAGTCCGCCGGAGGCATTGGTCTGAACGTGCACTGCATCCGGGCGAAGGGTA 1177681 Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129 | ||||| || || || || | ||||||||| | || || ||||| || |||| || Sbjct 1177682 CGTACATTGCGGGCACGAACGGTATCTCCAACGGGTTGGTTCCGATGCTGCGTGTCTACA 1177741 Query 94130 ACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCT 94189 ||||| |||| || || ||||||||||| || | | | ||| | ||||| ||| Sbjct 1177742 ACAACACGGCCCGGTATGTGGACCAGGGCGGCAACAAGCGTCCCGGTGCGTTCGCCATCT 1177801 Query 94190 ATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249 | |||||||| ||||| | || ||| | || |||| ||| || ||| |||| Sbjct 1177802 ACCTCGAGCCGTGGCATGGCGATGTGTTTGAGTTTCTCGATCTGAAGAAAAACACTGGCA 1177861 Query 94250 ACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309 | || || | || | ||| | |||||||| || |||||||| || || || |||| Sbjct 1177862 AGGAGGAGGTCCGTGCGCGTGACATGTTCTACGCGCTGTGGGTGCCGGATCTGTTCATGA 1177921 Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT 94369 | || || ||| ||| ||||| ||| | ||||| | || || ||||| |||| Sbjct 1177922 AGCGGGTGGAGGCGAACGAAATGTGGAGCCTTATGTGTCCGCACGACTGCCCCGGGCTGT 1177981 Query 94370 CCGACGTTTGTGGATCGCGT--TTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAA 94427 | || | |||| || ||||| |||| | | ||||| | | || Sbjct 1177982 CGGAG--TCGTGGGGCGAAGAGTTTGAGCGGCTGTACACGGGCTACGAGAAGGAAGGTCG 1178039 Query 94428 GGCCA---GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGT 94484 | || || |||| | || || |||| |||||| |||| | || ||||| Sbjct 1178040 GTTCATCCGGCAGGTGAAGGC-GC-AGGAT-CTGTGGTTCGCGATCATCGAGTCGCAGGT 1178096 Query 94485 GGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCA 94544 |||||||| ||| ||||| | | |||||| | |||| ||| ||||||||| Sbjct 1178097 CGAGACGGGCGTGCCGTACATGCTCTACAAGGATGCGTGCAACCGGAAGAGCAACCAGCA 1178156 Query 94545 GCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCC 94604 | || | || ||||||| ||||||| |||||||| ||||| |||||||| | || Sbjct 1178157 GAACGTGGGCACGATCAAGTGCTCGAACCTGTGCACGGAGATCGTCGAGTACTCGTCGAA 1178216 Query 94605 GGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGC 94664 |||||| ||||| ||||| || |||| || || ||| || || ||| | | Sbjct 1178217 GGACGAAATTGCGGTGTGCAATCTGGCGTCGATTGCGCTGAACATGTTTGTGAGGCCGGA 1178276 Query 94665 CTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGT 94724 ||||| || |||||| | ||| ||||| | | || ||| || Sbjct 1178277 TCGCACGT--ACGACTTCGTGA-AGCTGAAGGAGGTCGCCAA------------GATCGT 1178321 Query 94725 CTTG---AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAA 94781 | | |||||||||| | ||||||| |||| |||||| || ||||||||| || Sbjct 1178322 CACGCGCAACCTGAACAAAATCATCGACATCAACTACTACCCGGTGCCGGAGGCGAAGCG 1178381 Query 94782 CTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGT 94841 || ||| || || || || ||||| |||||||| ||||| | || || ||| | | Sbjct 1178382 TTCCAACATGCGCCACCGACCTATCGGTATCGGCGTGCAGGGAATGGCCGATGCGTTCAT 1178441 Query 94842 GATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGA 94901 | ||||| | || ||||| || || || |||| | | || || || Sbjct 1178442 TCTCATGCGCCATCCGTACGAAAGTGAGGAAGCACAAAAGCTGAACCAGCAGATCTTTGA 1178501 Query 94902 AAGCATTTATTACGGGGCCATGAAA-CAATCCGTCCACTTGGCCAGATCGGACGGCGGGC 94960 | ||| || || || || || | | | | || | |||||| | || || ||| | Sbjct 1178502 GACCATCTACTATGGCGCTCTGGAGGCTAGCTGTG-AGTTGGCC-GCCCG--CGACGGTC 1178557 Query 94961 CACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGG 95020 | ||||| ||| | || | || || |||| || | |||| |||| | |||| Sbjct 1178558 CGTACGAAACGTACGAGGGCTGTCCGGTGAGCAAGGGAATCCTGCAGTACGACATGTGGG 1178617 Query 95021 GTGTGAAGCCCTCGGGTCTGTACGACTGGGA--AGCTCTACGCGCTGATGTTATCAAACA 95078 || || ||| |||| |||||| |||| | | ||| | ||| || Sbjct 1178618 AGAAGACCCCAACGGACCTGTGGAACTGGGCCGAGCTGAAGGAAAAGAT--TGCCAAGCA 1178675 Query 95079 CGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCT 95138 ||| | || |||| || |||| || ||||| || ||||||||||| || || || Sbjct 1178676 TGGTATCCGGAATTCGCTCCTGCTGGCACCGATGCCGACCGCCTCCACGGCCCAAATTCT 1178735 Query 95139 TGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGC 95198 |||||||||||||||||||| || | ||| || ||||| ||||| |||| ||||| | Sbjct 1178736 GGGCAACAACGAGTCGTTCGAGCCGTACACTTCGAACGTCTACAATCGGCGCGTGCTGTC 1178795 Query 95199 CGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTG 95258 || || |||| || ||||| | || || || | ||| ||||| || || |||| Sbjct 1178796 GGGCGAGTTCCAGGTGGTCAACCACCATCTGCTGCAGGATCTGACCGAACTCGGCCTGTG 1178855 Query 95259 GGGTGACAAGGTCAAGAACCAACTGCTACGCGC-CAACGGCTCCGTCCAGAACATCCCGC 95317 || |||| | | ||||||||| | || |||| |||||| || | ||| ||| | Sbjct 1178856 GGATGACGATATGAAGAACCAAATCCT-TGCGCACAACGGTTCGATACAGCGGATCGAGG 1178914 Query 95318 AAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGAT 95363 |||| ||| || ||||| | || |||||||| ||||||||||| Sbjct 1178915 AAATTCCGCAGCACATCCGCGACCTGTACAAGACGGTGTGGGAGAT 1178960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494663882688320