Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 489 2e-133
seq9254 123 2e-23
seq9325 98.7 1e-15
seq8899 98.7 1e-15
seq9240 86.0 6e-12
>seq9207
Length=1443628
Score = 489 bits (542), Expect = 2e-133
Identities = 1243/1870 (66%), Gaps = 58/1870 (3%)
Strand=Plus/Minus
Query 152685 TCAACGGTAAACTGTTGTGTGTGCGCCGCAGGCTTTGTGCGCAAATAATACATGCCCGTT 152744
|| || |||||||| | || | | || ||||| ||||||| ||| |||||||||||
Sbjct 1179161 TCCACCGTAAACTGGATCGCGTTCACGGCCGGCTTGGTGCGCAGATAGTACATGCCCGTC 1179102
Query 152745 TTGAGGCCGCAGCG-CCACGAGTAATTGTGAATCGAAGTCATCACAGCGTACGTCGGTTG 152803
|| ||||| || | ||| ||| ||||||||| |||| | |||| ||||||
Sbjct 1179101 TTCAGGCC-CATCTTCCAGCCGTAGAAGTGAATCGACGTCAGCTTGCCGTAGTTCGGTTC 1179043
Query 152804 CGCCACGAACAGATTAAACGATTGGCTCTGATCTATGAAAGCGTTACGGTCGGCCGCCAT 152863
|||||| | || ||||| ||| |||||| ||||| || ||||| || |||||
Sbjct 1179042 GGCCACGTGAATGTTGAACGACTGGGACTGATCGATGAACGCACCCCGGTCCGCGGCCAT 1178983
Query 152864 CTCAAT-CATGCGTTTTG-CCTTCATCTCCCAGGCGGTTTTGTACAAATTTTTAACGCTA 152921
| || || |||||| || |||||||| | || ||||||| | | |
Sbjct 1178982 TTTGATGCA--CGTTTTCACCGATATCTCCCACACCGTCTTGTACAGGTCGCGGATGTGC 1178925
Query 152922 TCCGGTATACCTTCAATGTTCTGAATAGAGCCCTTGTGTGCAAAAATAGCGTTTCGTATT 152981
| ||| || | || || ||| || || || ||||| |||| || ||| ||
Sbjct 1178924 TGCGGAATTTCCTCGATCCGCTGTATCGAACCGTTGTGCGCAAGGATTTGGTTCTTCATA 1178865
Query 152982 TCGGGCGTGTACACGTTCAGTTTAATGAGGTCATCGATCAAGTACTGGTTGACCACTTGA 153041
||| ||| | |||| | || || | | || | ||||||||||| ||
Sbjct 1178864 TCGTCATCCCACAGGCCGAGTTCGGTCAGATCCTGCAGCAGATGGTGGTTGACCACCTGG 1178805
Query 153042 AACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAGGTTCAAAGGATTCG 153101
|||||||||| || ||| || | || || || |||| | || || || || |||
Sbjct 1178804 AACTCGCCCGACAGCACGCGCCGATTGTAGACGTTCGAAGTGTACGGCTCGAACGACTCG 1178745
Query 153102 TTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCACCAACAAAGAATTC 153161
|| ||||| || ||||| ||||||| ||||||||||| |||| || | ||||||
Sbjct 1178744 TTGTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGCATCGGTGCCAGCAGGAGCGAATTC 1178685
Query 153162 CGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCCACAGCGCCGACGGT 153221
|| | || ||| ||| | ||||||| | | ||| | |||||| ||| ||
Sbjct 1178684 CGGATACCATGCTTGGCAATCTTTTCCTTCAGCTCGGCCCAGTTCCACAGGTCCGTTGGG 1178625
Query 153222 GTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGACTGCCGGCAAACGTA 153281
||| | ||||||||||||||| | | ||| || | |||| ||| | ||||
Sbjct 1178624 GTCTTCTCCCACATGTCGTACTGCAGGATTCCCTTGCTCACCGGACAGCCCTCGTACGTT 1178565
Query 153282 CTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATG 153341
||| |||||||| ||||| || ||||||||||| || ||||||||||| |||
Sbjct 1178564 TCGTACGGACCGTCGCGGGCGGCCAACTCACAGCTAGCCTCCAGAGCGCCATAGTAGATG 1178505
Query 153342 GTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGC 153401
|| || ||| || | || || ||||| || || |||||||| |||||
Sbjct 1178504 GTCTCAAAGATCTGCTGGTTCAGCTTTTGTGCTTCCTCACTTTCGTACGGATGGCGCATG 1178445
Query 153402 AGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGTCGATGCTTCTCGTTG 153461
|| | || || ||||||| ||||| | |||| ||||| ||||| || | ||||
Sbjct 1178444 AGAATGAACGCATCGGCCATTCCCTGCACGCCGATACCGATAGGTCGGTGGCGCATGTTG 1178385
Query 153462 CTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGC 153521
||| |||| || | || |||| ||| ||||| |||||||| |||||||||
Sbjct 1178384 GAACGCTTCGCCTCCGGCACCGGGTAGTAGTTGATGTCGATGATTTTGTTCAGGTTGCGC 1178325
Query 153522 ACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGGT-CATTTCGTCGACGCG 153580
|| | || | | | |||| || ||| |||| || || || | | || | | |
Sbjct 1178324 GTGACGATCTTGGCGACCTCCTTCAGCTTCACGAAGTCGTACGTGCGATCCGGCCTCACA 1178265
Query 153581 TACGCATCGATTCACGGCAATAGACGCCAGATTACAGACGGC-----CGTCTCTTCGGCG 153635
|| || |||| ||||| ||||||||||| || || || |||| ||||| ||
Sbjct 1178264 AAC--ATG--TTCAGCGCAATCGACGCCAGATTGCACACCGCAATTTCGTC-CTTCGACG 1178210
Query 153636 TCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGC 153695
||||| |||||||| | ||| ||||| ||| || || ||||| || |||
Sbjct 1178209 A----GTACTCGACGATCTCCGTGCACAGGTTCGAGCACTTGATCGTGCCCACGTTCTGC 1178154
Query 153696 TGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACT 153755
|| ||||| || || |||||||| || ||| ||||||||||||| |||| ||||||||
Sbjct 1178153 TGGTTGCTCTTCCGGTTGCACGCATCCTTGTAGAGCATGTACGGCACGCCCGTCTCGACC 1178094
Query 153756 TGCGTTTCGACGATA---AACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGAT--AGC 153810
|||| |||| ||| |||| ||| |||||||| |||| || | ||| | |
Sbjct 1178093 TGCGACTCGATGATCGCGAACCA---CAGATCCTGCGCCTTCACCTGCCG--GATGAACC 1178039
Query 153811 GGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGA 153870
| || || ||||||| | | |||||| ||||||||||| ||||| | | || | |
Sbjct 1178038 GACCTTCCTTCTCGTAGCCCGTGTACAGCCGCTCAAACTCTTCGCCCCACGACTCCGACA 1177979
Query 153871 GGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCA 153930
| ||||| || | ||||||||||| || |||||| |||| || | || || ||
Sbjct 1177978 GCCCGGGGCAGTCGTGCGGACACATAAGGCTCCACATTTCGTTCGCCTCCACCCGCTTCA 1177919
Query 153931 TGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAATCCTCCGCGC 153990
||||||||||||||||||| |||||||| | | ||| ||||| | |||||| ||
Sbjct 1177918 TGAACAGATCCGGCACCCACAGCGCGTAGAACATGTCACGCGCACGGACCTCCTCCTTGC 1177859
Query 153991 CCATGTTGCGTTTCAGATTGAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGA 154050
| |||| ||||||| ||| | | | | ||| | ||||| || || | |||||
Sbjct 1177858 CAGTGTTTTTCTTCAGATCGAGAAACTCAAACACATCGCCATGCCACGGCTCGAGGTAGA 1177799
Query 154051 CGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATCGACGTGGCGCACCATATTGTTGA 154107
||| | ||||| |||| || |||||||| || || | || || | ||||||
Sbjct 1177798 TGGCGAACGCACCGGGACGCTTGTTGCCGCCCTGGTCCACATACCGGGCCGTGTTGTTGT 1177739
Query 154108 AGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGT---CGAATTGATCTTGC 154164
|||| |||| ||| || ||| ||| | | | | ||||| || || | || |
Sbjct 1177738 AGACACGCAGCATCGGAACCAACCCGTTGGAGATACCGTTCGTGCCCGCA---ATGTACG 1177682
Query 154165 TGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGG 154224
| || || || | |||||||| | |||||||| ||| || |||| || ||
Sbjct 1177681 TACCCTTCGCCCGGATGCAGTGCACGTTCAGACCAATGCCTCCGGCGGACTTGGAGATCA 1177622
Query 154225 CAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATCGTCGCGGACGCCG--AG 154282
||||| | |||||| ||| || || ||||| || |||| | ||| || ||
Sbjct 1177621 GTGCGCACTGCTTCAGCGTGTCGTAAATTCCCTCGATACTGTCGT--CCGACATCGTTAG 1177564
Query 154283 CAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGC 154342
| || || || ||| ||| || |||| |||||| ||| | ||| || ||
Sbjct 1177563 GAGAAAGCAGGACGACAGTTGGGGCCGCTGCGTGGCCGCCGCAAACATGGTCGGCGAGGC 1177504
Query 154343 GTGCGTAAACAGTTTTTGGCTC----ATCATGCGGTACGTTTCGATGGCGTCTTCGATAT 154398
||||||||| | | |||| | || |||||||||||| || | ||||| |
Sbjct 1177503 GTGCGTAAA----GTATCGCTCCGAAAGCAAATTGTACGTTTCGATTGCCGCATCGATGT 1177448
Query 154399 CATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACGTTCGGCGACTC 154458
| |||||||| || |||| || |||||||| |||||||||||||| |||||| |||
Sbjct 1177447 CCTCGCCGTGGATCCCGATGGCAACGCGCATCAGCATGTGCTGCGGTCGTTCGACGA--- 1177391
Query 154459 TATTG---TCAATCTTCAAGAGATATCCATTTTCGAGGGTTTTGTAACCGAAATACTTGT 154515
| ||| | ||||||| || || |||||| |||||| | || ||||| ||||
Sbjct 1177390 TCTTGCCCTTGATCTTCAGCAGGTAGGACCGTTCGAGCGTTTTGAAGCCAAAATAATTGT 1177331
Query 154516 ATTCAAAATC 154525
| |||| ||
Sbjct 1177330 ACCCAAAGTC 1177321
>seq9254
Length=4138565
Score = 123 bits (136), Expect = 2e-23
Identities = 289/431 (67%), Gaps = 15/431 (3%)
Strand=Plus/Minus
Query 52305 CTGCTGAATGCGTTCGAGCACG-TGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAA 52363
||| | ||||| |||| ||| | ||||| || || |||||| | |||||| ||||
Sbjct 2197472 CTGTTCAATGCCATCGAA-ACGCTACCGTGTGTGAAGAAGAAGGCTGACTGGGCACTGAA 2197414
Query 52364 GTGGATCGAGAGCGACACCGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGA 52423
||||| |||| | | |||| | | |||||| | || || || ||| |||||
Sbjct 2197413 CTGGATTTCGAGCAAGAAAGCCAACTTCGGCGAGCGTGTTGTCGCGTTTGCCGCCGTCGA 2197354
Query 52424 GGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAAT 52483
||| | || || ||||||||||||||| ||||| | |||| | | ||| | ||
Sbjct 2197353 GGGAATTTTCTTCAGCGGCAGCTTTGCCGCTATCTTCTGGCTTAAGAAGCGAGGACTGAT 2197294
Query 52484 GCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTT 52543
||| ||| |||| ||| |||||| |||| ||||| ||||| || ||||| |||||
Sbjct 2197293 GCCAGGCTTGACCTTCTCGAACGAGCTGATTTCGCGTGACGAGGGCTTGCACTGTGACTT 2197234
Query 52544 TGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTG-- 52601
||| ||||| | ||| | || |||| || || | ||| | ||
Sbjct 2197233 TGCTTGCCTTATGTTCAAATACCTGGT----TCAAAAGCCGA--CG--CGCGAGCGTGTG 2197182
Query 52602 ---AGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCG 52658
||||| | || ||||||| |||||| ||||||| |||| ||||||||
Sbjct 2197181 ACTAGCATCATTCGCGATGCGGTGGTAATCGAACAGGAGTTCCTTACCAAGGCGCTGCCA 2197122
Query 52659 GTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGAT 52718
||||| |||||||||||||| | |||| ||||||||||||| || || ||
Sbjct 2197121 GTCGATATGCTGGGCATGAACTGTGACCTGATGTCGCAGTACATCGAGTTCGTTGCCGAC 2197062
Query 52719 CGTCTGTTGGT 52729
|| ||| ||||
Sbjct 2197061 CGGCTGCTGGT 2197051
>seq9325
Length=2359367
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||| | ||| || || | | | || ||||| || |||||||||||| |
Sbjct 261130 CCTCCGCGAAGACGAAGAACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAC 261071
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| |||||| |||||| || || || || | |||| | |||||| || || || ||
Sbjct 261070 AGAGTACGTCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGA 261011
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
||||| || ||||| ||| || || | | || | |||||| | | ||| |||
Sbjct 261010 ATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAAGGCTCGACC 260951
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| || | || || |||||||| || || || |||||||||||
Sbjct 260950 TCGAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAAATCTGCAT 260904
>seq8899
Length=3132144
Score = 98.7 bits (108), Expect = 1e-15
Identities = 153/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459
|||| ||| | || | | | |||||||| |||||||||||||| | |||||
Sbjct 384465 CGCAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAAAGCGTACGGCCA 384524
Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519
||||| || || ||||||| |||| ||||||||||| || || || || ||||| ||
Sbjct 384525 TCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGTTGATCTGGCGGAATTCCTTCCTTA 384584
Query 138520 TCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAG 138578
|| ||| |||| | || | | || | ||||| | || ||| ||||| | || |
Sbjct 384585 TC-CTGAATTTTCGCCTTCACATTCTCGATCGTGTCCGACGGCTCGACCTCAAGGGTGAT 384643
Query 138579 CGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| || ||||| || ||||| || |||||||||||
Sbjct 384644 GGTCTTGCCAGTGAGGGTTTTCACGAAAATCTGCAT 384679
>seq9240
Length=943838
Score = 86.0 bits (94), Expect = 6e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459
|||| || | ||| | | | |||||||| ||||||||||||||| || || ||
Sbjct 630369 CGCAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGTCCA 630428
Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519
||||| || || || |||| |||| |||||||| |||||||| || || || || |||
Sbjct 630429 TCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTG 630488
Query 138520 TCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579
|| ||| || || | | || | || || | | ||| ||||| | || |
Sbjct 630489 TCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATG 630548
Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| ||||| || || ||||| || || ||||||||
Sbjct 630549 GTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 630583
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496202898138240
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