Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq9207 489 2e-133 seq9254 123 2e-23 seq9325 98.7 1e-15 seq8899 98.7 1e-15 seq9240 86.0 6e-12 >seq9207 Length=1443628 Score = 489 bits (542), Expect = 2e-133 Identities = 1243/1870 (66%), Gaps = 58/1870 (3%) Strand=Plus/Minus Query 152685 TCAACGGTAAACTGTTGTGTGTGCGCCGCAGGCTTTGTGCGCAAATAATACATGCCCGTT 152744 || || |||||||| | || | | || ||||| ||||||| ||| ||||||||||| Sbjct 1179161 TCCACCGTAAACTGGATCGCGTTCACGGCCGGCTTGGTGCGCAGATAGTACATGCCCGTC 1179102 Query 152745 TTGAGGCCGCAGCG-CCACGAGTAATTGTGAATCGAAGTCATCACAGCGTACGTCGGTTG 152803 || ||||| || | ||| ||| ||||||||| |||| | |||| |||||| Sbjct 1179101 TTCAGGCC-CATCTTCCAGCCGTAGAAGTGAATCGACGTCAGCTTGCCGTAGTTCGGTTC 1179043 Query 152804 CGCCACGAACAGATTAAACGATTGGCTCTGATCTATGAAAGCGTTACGGTCGGCCGCCAT 152863 |||||| | || ||||| ||| |||||| ||||| || ||||| || ||||| Sbjct 1179042 GGCCACGTGAATGTTGAACGACTGGGACTGATCGATGAACGCACCCCGGTCCGCGGCCAT 1178983 Query 152864 CTCAAT-CATGCGTTTTG-CCTTCATCTCCCAGGCGGTTTTGTACAAATTTTTAACGCTA 152921 | || || |||||| || |||||||| | || ||||||| | | | Sbjct 1178982 TTTGATGCA--CGTTTTCACCGATATCTCCCACACCGTCTTGTACAGGTCGCGGATGTGC 1178925 Query 152922 TCCGGTATACCTTCAATGTTCTGAATAGAGCCCTTGTGTGCAAAAATAGCGTTTCGTATT 152981 | ||| || | || || ||| || || || ||||| |||| || ||| || Sbjct 1178924 TGCGGAATTTCCTCGATCCGCTGTATCGAACCGTTGTGCGCAAGGATTTGGTTCTTCATA 1178865 Query 152982 TCGGGCGTGTACACGTTCAGTTTAATGAGGTCATCGATCAAGTACTGGTTGACCACTTGA 153041 ||| ||| | |||| | || || | | || | ||||||||||| || Sbjct 1178864 TCGTCATCCCACAGGCCGAGTTCGGTCAGATCCTGCAGCAGATGGTGGTTGACCACCTGG 1178805 Query 153042 AACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAGGTTCAAAGGATTCG 153101 |||||||||| || ||| || | || || || |||| | || || || || ||| Sbjct 1178804 AACTCGCCCGACAGCACGCGCCGATTGTAGACGTTCGAAGTGTACGGCTCGAACGACTCG 1178745 Query 153102 TTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCACCAACAAAGAATTC 153161 || ||||| || ||||| ||||||| ||||||||||| |||| || | |||||| Sbjct 1178744 TTGTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGCATCGGTGCCAGCAGGAGCGAATTC 1178685 Query 153162 CGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCCACAGCGCCGACGGT 153221 || | || ||| ||| | ||||||| | | ||| | |||||| ||| || Sbjct 1178684 CGGATACCATGCTTGGCAATCTTTTCCTTCAGCTCGGCCCAGTTCCACAGGTCCGTTGGG 1178625 Query 153222 GTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGACTGCCGGCAAACGTA 153281 ||| | ||||||||||||||| | | ||| || | |||| ||| | |||| Sbjct 1178624 GTCTTCTCCCACATGTCGTACTGCAGGATTCCCTTGCTCACCGGACAGCCCTCGTACGTT 1178565 Query 153282 CTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATG 153341 ||| |||||||| ||||| || ||||||||||| || ||||||||||| ||| Sbjct 1178564 TCGTACGGACCGTCGCGGGCGGCCAACTCACAGCTAGCCTCCAGAGCGCCATAGTAGATG 1178505 Query 153342 GTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGC 153401 || || ||| || | || || ||||| || || |||||||| ||||| Sbjct 1178504 GTCTCAAAGATCTGCTGGTTCAGCTTTTGTGCTTCCTCACTTTCGTACGGATGGCGCATG 1178445 Query 153402 AGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGTCGATGCTTCTCGTTG 153461 || | || || ||||||| ||||| | |||| ||||| ||||| || | |||| Sbjct 1178444 AGAATGAACGCATCGGCCATTCCCTGCACGCCGATACCGATAGGTCGGTGGCGCATGTTG 1178385 Query 153462 CTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGC 153521 ||| |||| || | || |||| ||| ||||| |||||||| ||||||||| Sbjct 1178384 GAACGCTTCGCCTCCGGCACCGGGTAGTAGTTGATGTCGATGATTTTGTTCAGGTTGCGC 1178325 Query 153522 ACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGGT-CATTTCGTCGACGCG 153580 || | || | | | |||| || ||| |||| || || || | | || | | | Sbjct 1178324 GTGACGATCTTGGCGACCTCCTTCAGCTTCACGAAGTCGTACGTGCGATCCGGCCTCACA 1178265 Query 153581 TACGCATCGATTCACGGCAATAGACGCCAGATTACAGACGGC-----CGTCTCTTCGGCG 153635 || || |||| ||||| ||||||||||| || || || |||| ||||| || Sbjct 1178264 AAC--ATG--TTCAGCGCAATCGACGCCAGATTGCACACCGCAATTTCGTC-CTTCGACG 1178210 Query 153636 TCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGC 153695 ||||| |||||||| | ||| ||||| ||| || || ||||| || ||| Sbjct 1178209 A----GTACTCGACGATCTCCGTGCACAGGTTCGAGCACTTGATCGTGCCCACGTTCTGC 1178154 Query 153696 TGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACT 153755 || ||||| || || |||||||| || ||| ||||||||||||| |||| |||||||| Sbjct 1178153 TGGTTGCTCTTCCGGTTGCACGCATCCTTGTAGAGCATGTACGGCACGCCCGTCTCGACC 1178094 Query 153756 TGCGTTTCGACGATA---AACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGAT--AGC 153810 |||| |||| ||| |||| ||| |||||||| |||| || | ||| | | Sbjct 1178093 TGCGACTCGATGATCGCGAACCA---CAGATCCTGCGCCTTCACCTGCCG--GATGAACC 1178039 Query 153811 GGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGA 153870 | || || ||||||| | | |||||| ||||||||||| ||||| | | || | | Sbjct 1178038 GACCTTCCTTCTCGTAGCCCGTGTACAGCCGCTCAAACTCTTCGCCCCACGACTCCGACA 1177979 Query 153871 GGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCA 153930 | ||||| || | ||||||||||| || |||||| |||| || | || || || Sbjct 1177978 GCCCGGGGCAGTCGTGCGGACACATAAGGCTCCACATTTCGTTCGCCTCCACCCGCTTCA 1177919 Query 153931 TGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAATCCTCCGCGC 153990 ||||||||||||||||||| |||||||| | | ||| ||||| | |||||| || Sbjct 1177918 TGAACAGATCCGGCACCCACAGCGCGTAGAACATGTCACGCGCACGGACCTCCTCCTTGC 1177859 Query 153991 CCATGTTGCGTTTCAGATTGAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGA 154050 | |||| ||||||| ||| | | | | ||| | ||||| || || | ||||| Sbjct 1177858 CAGTGTTTTTCTTCAGATCGAGAAACTCAAACACATCGCCATGCCACGGCTCGAGGTAGA 1177799 Query 154051 CGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATCGACGTGGCGCACCATATTGTTGA 154107 ||| | ||||| |||| || |||||||| || || | || || | |||||| Sbjct 1177798 TGGCGAACGCACCGGGACGCTTGTTGCCGCCCTGGTCCACATACCGGGCCGTGTTGTTGT 1177739 Query 154108 AGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGT---CGAATTGATCTTGC 154164 |||| |||| ||| || ||| ||| | | | | ||||| || || | || | Sbjct 1177738 AGACACGCAGCATCGGAACCAACCCGTTGGAGATACCGTTCGTGCCCGCA---ATGTACG 1177682 Query 154165 TGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGG 154224 | || || || | |||||||| | |||||||| ||| || |||| || || Sbjct 1177681 TACCCTTCGCCCGGATGCAGTGCACGTTCAGACCAATGCCTCCGGCGGACTTGGAGATCA 1177622 Query 154225 CAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATCGTCGCGGACGCCG--AG 154282 ||||| | |||||| ||| || || ||||| || |||| | ||| || || Sbjct 1177621 GTGCGCACTGCTTCAGCGTGTCGTAAATTCCCTCGATACTGTCGT--CCGACATCGTTAG 1177564 Query 154283 CAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGC 154342 | || || || ||| ||| || |||| |||||| ||| | ||| || || Sbjct 1177563 GAGAAAGCAGGACGACAGTTGGGGCCGCTGCGTGGCCGCCGCAAACATGGTCGGCGAGGC 1177504 Query 154343 GTGCGTAAACAGTTTTTGGCTC----ATCATGCGGTACGTTTCGATGGCGTCTTCGATAT 154398 ||||||||| | | |||| | || |||||||||||| || | ||||| | Sbjct 1177503 GTGCGTAAA----GTATCGCTCCGAAAGCAAATTGTACGTTTCGATTGCCGCATCGATGT 1177448 Query 154399 CATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACGTTCGGCGACTC 154458 | |||||||| || |||| || |||||||| |||||||||||||| |||||| ||| Sbjct 1177447 CCTCGCCGTGGATCCCGATGGCAACGCGCATCAGCATGTGCTGCGGTCGTTCGACGA--- 1177391 Query 154459 TATTG---TCAATCTTCAAGAGATATCCATTTTCGAGGGTTTTGTAACCGAAATACTTGT 154515 | ||| | ||||||| || || |||||| |||||| | || ||||| |||| Sbjct 1177390 TCTTGCCCTTGATCTTCAGCAGGTAGGACCGTTCGAGCGTTTTGAAGCCAAAATAATTGT 1177331 Query 154516 ATTCAAAATC 154525 | |||| || Sbjct 1177330 ACCCAAAGTC 1177321 >seq9254 Length=4138565 Score = 123 bits (136), Expect = 2e-23 Identities = 289/431 (67%), Gaps = 15/431 (3%) Strand=Plus/Minus Query 52305 CTGCTGAATGCGTTCGAGCACG-TGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAA 52363 ||| | ||||| |||| ||| | ||||| || || |||||| | |||||| |||| Sbjct 2197472 CTGTTCAATGCCATCGAA-ACGCTACCGTGTGTGAAGAAGAAGGCTGACTGGGCACTGAA 2197414 Query 52364 GTGGATCGAGAGCGACACCGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGA 52423 ||||| |||| | | |||| | | |||||| | || || || ||| ||||| Sbjct 2197413 CTGGATTTCGAGCAAGAAAGCCAACTTCGGCGAGCGTGTTGTCGCGTTTGCCGCCGTCGA 2197354 Query 52424 GGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAAT 52483 ||| | || || ||||||||||||||| ||||| | |||| | | ||| | || Sbjct 2197353 GGGAATTTTCTTCAGCGGCAGCTTTGCCGCTATCTTCTGGCTTAAGAAGCGAGGACTGAT 2197294 Query 52484 GCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTT 52543 ||| ||| |||| ||| |||||| |||| ||||| ||||| || ||||| ||||| Sbjct 2197293 GCCAGGCTTGACCTTCTCGAACGAGCTGATTTCGCGTGACGAGGGCTTGCACTGTGACTT 2197234 Query 52544 TGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTG-- 52601 ||| ||||| | ||| | || |||| || || | ||| | || Sbjct 2197233 TGCTTGCCTTATGTTCAAATACCTGGT----TCAAAAGCCGA--CG--CGCGAGCGTGTG 2197182 Query 52602 ---AGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCG 52658 ||||| | || ||||||| |||||| ||||||| |||| |||||||| Sbjct 2197181 ACTAGCATCATTCGCGATGCGGTGGTAATCGAACAGGAGTTCCTTACCAAGGCGCTGCCA 2197122 Query 52659 GTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGAT 52718 ||||| |||||||||||||| | |||| ||||||||||||| || || || Sbjct 2197121 GTCGATATGCTGGGCATGAACTGTGACCTGATGTCGCAGTACATCGAGTTCGTTGCCGAC 2197062 Query 52719 CGTCTGTTGGT 52729 || ||| |||| Sbjct 2197061 CGGCTGCTGGT 2197051 >seq9325 Length=2359367 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| || || | | | || ||||| || |||||||||||| | Sbjct 261130 CCTCCGCGAAGACGAAGAACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAC 261071 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| |||||| || || || || | |||| | |||||| || || || || Sbjct 261070 AGAGTACGTCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGA 261011 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||| || ||||| ||| || || | | || | |||||| | | ||| ||| Sbjct 261010 ATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAAGGCTCGACC 260951 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || || |||||||| || || || ||||||||||| Sbjct 260950 TCGAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAAATCTGCAT 260904 >seq8899 Length=3132144 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459 |||| ||| | || | | | |||||||| |||||||||||||| | ||||| Sbjct 384465 CGCAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAAAGCGTACGGCCA 384524 Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 ||||| || || ||||||| |||| ||||||||||| || || || || ||||| || Sbjct 384525 TCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGTTGATCTGGCGGAATTCCTTCCTTA 384584 Query 138520 TCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAG 138578 || ||| |||| | || | | || | ||||| | || ||| ||||| | || | Sbjct 384585 TC-CTGAATTTTCGCCTTCACATTCTCGATCGTGTCCGACGGCTCGACCTCAAGGGTGAT 384643 Query 138579 CGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || ||||| || ||||| || ||||||||||| Sbjct 384644 GGTCTTGCCAGTGAGGGTTTTCACGAAAATCTGCAT 384679 >seq9240 Length=943838 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459 |||| || | ||| | | | |||||||| ||||||||||||||| || || || Sbjct 630369 CGCAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGTCCA 630428 Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 ||||| || || || |||| |||| |||||||| |||||||| || || || || ||| Sbjct 630429 TCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTG 630488 Query 138520 TCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579 || ||| || || | | || | || || | | ||| ||||| | || | Sbjct 630489 TCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATG 630548 Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || ||||| || || ||||| || || |||||||| Sbjct 630549 GTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 630583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496202898138240