Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq9207 257 2e-63 seq9325 132 5e-26 seq9240 127 2e-24 seq8899 107 2e-18 seq8738 91.5 1e-13 >seq9207 Length=1443628 Score = 257 bits (284), Expect = 2e-63 Identities = 1203/1868 (64%), Gaps = 79/1868 (4%) Strand=Plus/Minus Query 145719 GTCGACGGTGAACTGCGTCGCTTGAGCGGCCGGTTTTGTGCGCAGATAGTACATGCCGGT 145778 ||| || || ||||| |||| | ||||||| || |||||||||||||||||||| || Sbjct 1179162 GTCCACCGTAAACTGGATCGCGTTCACGGCCGGCTTGGTGCGCAGATAGTACATGCCCGT 1179103 Query 145779 CTTGAGCTGTTTCTGCCACGTGTAAAAGTGTATGCTCGACA--TGACCGAGTACGTGGGT 145836 ||| || ||| ||| ||| ||||| || || || | ||| || | ||| Sbjct 1179102 CTTCAGGCCCATCTTCCAGCCGTAGAAGTGAATCGACGTCAGCTTGCCG--TAGTTCGGT 1179045 Query 145837 TCGGCGACAAACAAATTTAGAGATTGGCTCTGATCAATGAAAGGAGCCCGGTCGGCGGCC 145896 ||||| || | || | || ||| |||||| ||||| | | ||||||| |||||| Sbjct 1179044 TCGGCCACGTGAATGTTGAACGACTGGGACTGATCGATGAACGCACCCCGGTCCGCGGCC 1178985 Query 145897 ATGTCTATCATGCAC--TTTGATTTA-ATTTCCCATGCGGTTTTAAAGAGATCCTTGACG 145953 || | | |||||| ||| | | || ||||| | || || | || || || | Sbjct 1178984 ATTT---TGATGCACGTTTTCACCGATATCTCCCACACCGTCTTGTACAGGTCGCGGATG 1178928 Query 145954 TGCTGGGGTATTTCGTCAATGTTCTGCACAGACCCATTTTCGGCCAATATTTTGTTGCGC 146013 ||||| || ||||| || || ||| | || || || | || | |||| ||| | Sbjct 1178927 TGCTGCGGAATTTCCTCGATCCGCTGTATCGAACCGTTGTGCGCAAGGATTTGGTTCTTC 1178868 Query 146014 AATTCTGGAGTGTAAATGTTCAAGTCTACGAGGGCCTTGATGAGATACTGGTTGACCACC 146073 | || | | | | | || || ||| | |||| |||||||||||| Sbjct 1178867 ATATCGTCATCCCACAGGCCGAGTTCGGTCAGATCCTGCAGCAGATGGTGGTTGACCACC 1178808 Query 146074 TGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCTCGAACGAC 146133 || |||||||| | || ||||||| || ||||| ||| |||||||||||||| Sbjct 1178807 TGGAACTCGCCCGACAGCACGCGCCGATTGTAGACGTTCGAAGTGTACGGCTCGAACGAC 1178748 Query 146134 TCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCACCAGCAAAGAG 146193 |||||||| || || || || ||||| | ||||| ||||| |||| ||| | || Sbjct 1178747 TCGTTGTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGCATCGGTGCCAGCAGGAGCGAA 1178688 Query 146194 TTTCTCACGCCGTGTCTTTG-AATCTTTTCCCGTAGTTTGGACCAATTCCACAAATGATC 146252 || | | || || ||| | |||||||||| || | || ||| ||||||| | || Sbjct 1178687 TTCCGGATACCATG-CTTGGCAATCTTTTCCTTCAGCTCGGCCCAGTTCCACA---GGTC 1178632 Query 146253 CGTGGGATAGATATTGT---AGTTGTCGTAATGCATAGTGCCGCGGAACAGGGGGCTATT 146309 ||| || | | || | | ||||||| |||| | || | || || | Sbjct 1178631 CGTTGG---GGTCTTCTCCCACATGTCGTACTGCAGGATTCCCTTGCTCACCGGACAGCC 1178575 Query 146310 CTCGTACGATTCATAAGGACCGTCGATCTTGGCCAGTTCGCAGCTAGCTTCCAGAGCCGA 146369 |||||||| ||| || ||||||||| ||||| || |||||||| |||||||| Sbjct 1178574 CTCGTACGTTTCGTACGGACCGTCGCGGGCGGCCAACTCACAGCTAGCCTCCAGAGCGCC 1178515 Query 146370 AAAGTATATGGTCTCCGCGATCATGTAGTTGACGCTCCTG-GCCTCCTCGCTGTCGTAGG 146428 | |||| |||||||| |||| | ||| | ||| || || ||||| || ||||| | Sbjct 1178514 ATAGTAGATGGTCTCAAAGATCTGCTGGTTCA-GCTTTTGTGCTTCCTCACTTTCGTACG 1178456 Query 146429 GGATATCG-AGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCGACACCAACGGGGCGG 146487 | || || | || | || || ||||| | ||||| | |||| ||| | || ||| Sbjct 1178455 G-ATGGCGCATGAGAATGAACGCATCGGCCATTCCCTGCACGCCGATACCGATAGGTCGG 1178397 Query 146488 TGTTTCTTGTT---ACTGTTCGCAGCGCCCGCAGTGGGATAGTGGTTGCTGTCGATGATC 146544 || | |||| || ||||| | || ||| ||| |||| |||| |||||||||| Sbjct 1178396 TGGCGCATGTTGGAACGCTTCGC--CTCCGGCACCGGG-TAGTAGTTGATGTCGATGATT 1178340 Query 146545 TTGTTGAGATTACGCACGACAATTTTCGTCAAACGATTCAGCAGGACATAGTCAAATGTT 146604 ||||| || || ||| ||| || || | | |||||| || |||| | || Sbjct 1178339 TTGTTCAGGTTGCGCGTGACGATCTTGGCGACCTCCTTCAGCTTCACGAAGTCGTACGTG 1178280 Query 146605 TTAGTTTTAACGTTGACGCACTTGTTGACGGCGATAGAGGCCAAGTTACATACGGCAGTC 146664 | | | || || |||| | || || || |||| || || || ||| | Sbjct 1178279 CGA---TCCGGCCTCACAAACATGTTCAGCGCAATCGACGCCAGATTGCACACCGCAATT 1178223 Query 146665 TCGTCCTT-GTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCC 146723 |||||||| | || | |||| || ||||| | ||| ||||| ||||||||| |||| Sbjct 1178222 TCGTCCTTCGACG-AGTACTCGACGATCTCCGTGCACAGGTTCGAGCACTTGATCGTGCC 1178164 Query 146724 CAAAtttttttGGTTACTAAACTTGTTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCC 146783 || || | ||||| || | |||||| | |||||||||||||||||||| | || Sbjct 1178163 CACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCCTTGTAGAGCATGTACGGCACGCC 1178104 Query 146784 GGTTTCGACATTGGTCTCGACGAT---GAATCTAAACAAATCTCTG-GCCTTTACTTGTC 146839 || ||||| | | ||||| ||| ||| | ||| ||| ||| ||||| || || | Sbjct 1178103 CGTCTCGACCTGCGACTCGATGATCGCGAACC---ACAGATC-CTGCGCCTTCACCTGCC 1178048 Query 146840 TTTCGTACAGTTTATTCTTTTCGTATTTCTCGTACAATATTTCAAAAC--TAGAACCGT- 146896 | || | | ||| ||||| | ||||| ||||| | | || Sbjct 1178047 GGATGAACCGACCTTCCTTCTCGTAGCCCGTGTACAGCCGCTCAAACTCTTCGCCCCACG 1177988 Query 146897 ACTCGTCGAGGAGGCCGGGATACTTTTTGGGACAGAACAGCGACCATTCTTTATTCTCCT 146956 |||| ||| || ||||| | | | ||||| | || ||| || ||| ||| Sbjct 1177987 ACTC--CGAC-AGCCCGGGGCAGTCGTGCGGACACATAAGGCTCCACATTTCGTTCGCCT 1177931 Query 146957 TCACGCGTTCCATAAACAAATCGGGAATCCAAAG-GCCCAGCATCAAGTCGCGAGCCTTG 147015 ||| || | ||| |||| ||| || | ||| || || || | || ||| || || | Sbjct 1177930 CCACCCGCTTCATGAACAGATCCGGCACCCACAGCGCGTAGAA-CATGTCACGCGCACGG 1177872 Query 147016 GCGTCCTCGGAGCCCATGTTGCGTCTCAAGTTGAGGACATCGTAAATTTCCGGATGCCAA 147075 | ||||| ||| |||| ||| | ||| | || | | || |||||| Sbjct 1177871 ACCTCCTCCTTGCCAGTGTTTTTCTTCAGATCGAGAAACTCAAACACATCGCCATGCCAC 1177812 Query 147076 GGCTCCACGTATGCGGCGAGTGCGCCTTTTCGCTTA---CCGCCCTGATCGACGTGGCGC 147132 ||||| | ||| ||||| || || ||||| |||||||| || || | || Sbjct 1177811 GGCTCGAGGTAGATGGCGAACGCACCGGGACGCTTGTTGCCGCCCTGGTCCACATACCGG 1177752 Query 147133 ACCATGTTATTGAAGACTCGTAACATGGACACGAGGCCGCCGGATTTTGTG---GTGCCG 147189 || |||| ||| |||| || | ||| | || | ||| ||| | | ||||| Sbjct 1177751 GCCGTGTTGTTGTAGACACGCAGCATCGGAACCAACCCGTTGGAGATACCGTTCGTGCCC 1177692 Query 147190 T---TGTATTGA------GCGCTGACGCTTTGCACGCTCAGCCCGAGACCTCCGCCCAGA 147240 |||| | || | || || |||||| |||| || | |||||| | Sbjct 1177691 GCAATGTACGTACCCTTCGCCCGGATGCAGTGCACGTTCAGACCAATGCCTCCGGCGGAC 1177632 Query 147241 TTCGAAATCAAAGCGGACTCGTGCAAGGTCTTGTAGATGCCGTCGATGCTGTCTTCCTTG 147300 || || |||| ||| ||| | || || | ||| || || ||||| ||||| ||| Sbjct 1177631 TTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAAATTCCCTCGATACTGTCGTCCGAC 1177572 Query 147301 ATGCATTGCAGGAAACACGAACACATTTGGGGACGACACGTGCCCGCCGCAAACAGCGTG 147360 || | | || || || || ||| |||||| || |||| |||||||||||| || Sbjct 1177571 ATCGTTAGGAGAAAGCAGGACGACAGTTGGGGCCGCTGCGTGGCCGCCGCAAACATGGTC 1177512 Query 147361 GGGCTGGCGTGCGTGAACGT---GCCCAGACTCATCAATTGATACGTTTCAATGGCGCTC 147417 || ||||||||| || || || | || | ||| | |||||||| || || | | Sbjct 1177511 GGCGAGGCGTGCGT-AAAGTATCGCTCCGA--AAGCAAATTGTACGTTTCGATTGC-CGC 1177456 Query 147418 AT-AACGTCATCGCCGTGAATGGCCAGGGCGACGCGCATGAGCATGTGCTGGGGTCGTTC 147476 || | ||| |||||||| || | | ||| |||||||| ||||||||||| |||||||| Sbjct 1177455 ATCGATGTCCTCGCCGTGGATCCCGATGGCAACGCGCATCAGCATGTGCTGCGGTCGTTC 1177396 Query 147477 CGCAATCACGTCATTGACTTTTAATAGATA--TCCATTGGTCAGAGTTTTGAAACCAAAG 147534 | ||| | | |||| || | || || || || | || |||||||| ||||| Sbjct 1177395 GACGATCTTGCCCTTGATCTTCAGCAGGTAGGACCGTTCG--AGCGTTTTGAAGCCAAAA 1177338 Query 147535 TACTTGTA 147542 || ||||| Sbjct 1177337 TAATTGTA 1177330 >seq9325 Length=2359367 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||| ||||| | || | ||||| || | || || || || || || ||||| ||| Sbjct 261131 TCCTCCGCGAAGACGAAGAACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGA 261072 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || || || || || ||||| ||||||||| ||||||| ||||||||||| || || Sbjct 261071 CAGAGTACGTCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGG 261012 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| || ||||| | |||| |||||||| | |||||| Sbjct 261011 AATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAAGGCTCGAC 260952 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || ||||| ||||| || || || ||||||||||| Sbjct 260951 CTCGAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAAATCTGCAT 260904 >seq9240 Length=943838 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | |||| ||||| ||| | || ||||| || ||||| ||||| ||| Sbjct 630354 GCACCACCACGGAGGCGCAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCG 630413 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 || |||||| ||| || ||||| || || ||| |||||| |||||||| || || Sbjct 630414 GACAGCGTGCGTCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGC 630473 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || ||||||||||||||| ||| ||| ||| | | |||| || |||| |||| Sbjct 630474 GGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCG 630533 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || | ||| | || || || || || ||||| || || |||||||| Sbjct 630534 ACCTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 630583 >seq8899 Length=3132144 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||| |||| || | || ||||| || ||||| ||||| || Sbjct 384453 CCACCACGAAGTCGCAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAA 384512 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| || ||| || ||||| || || ||| |||||| ||||| ||||| || || Sbjct 384513 AGCGTACGGCCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGTTGATCTGGCGGA 384572 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||| ||| |||||| ||| | | |||| ||||||| |||||| Sbjct 384573 ATTCCTTCCTTATCCTGAATTTTCGCCTTCACATTCTCGATCGTGTCCGACGGCTCGACC 384632 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || ||||| || || ||||| || ||||||||||| Sbjct 384633 TCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACGAAAATCTGCAT 384679 >seq8738 Length=1280009 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||||||||| | || | |||| ||| | |||||||| || || || |||||||| Sbjct 1177434 TCCACCGCGCAGACGAAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGA 1177493 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || || ||| || ||||| || || || |||| | ||||||||||| ||||| Sbjct 1177494 AAGAGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGG 1177553 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| || || ||| | | || | ||||||| | ||| || Sbjct 1177554 GATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCTCCAC 1177613 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || || || || || || ||||||||||| Sbjct 1177614 CTCCAACGTGATGGTCTTTCCCGTAAGGGTCTTGACGAAAATCTGCAT 1177661 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | |||| ||| | |||||||| || || || |||||||| Sbjct 1177207 CCACCGCGCAGACGAAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGAA 1177266 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || ||||| || || || |||| | ||||||||||| ||||| Sbjct 1177267 AGGGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGG 1177326 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| || || ||| | | || | ||||||| | ||| || Sbjct 1177327 ATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCTCAACC 1177386 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || ||||| || || || ||||| ||||| Sbjct 1177387 TCCAACGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAAATTTGCAT 1177433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475443787454080