Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq9207 122 1e-22 seq9254 114 2e-20 seq9217 95.1 1e-14 >seq9207 Length=1443628 Score = 122 bits (134), Expect = 1e-22 Identities = 1004/1605 (63%), Gaps = 40/1605 (2%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 || || |||||||| |||||||| || ||| ||||||| | || | || || || | | Sbjct 1179122 CGCAGATAGTACATGCCCGTCTTCAGGCCCATCTTCCAGCCGTAGAAGTGAATCGACGTC 1179063 Query 115618 AACTTGGAG-AGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 115676 | |||| | ||| | || ||| | | ||| | ||||| ||||||||||| Sbjct 1179062 AGCTTGCCGTAGT-TCGGTTCGGCCACGTGAATGTTGAACGACTGGGACTGATCGATGAA 1179004 Query 115677 GCGTCCCCGATCCGCCGCCATATCAAT-CACATCCTTCATCTTGATTTCCCACACAGTTC 115735 ||||| ||||| ||||| | || ||| | |||| | || |||||||| || Sbjct 1179003 CGCACCCCGGTCCGCGGCCATTTTGATGCACGTT-TTCACCGATATCTCCCACACCGTCT 1178945 Query 115736 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCT 115795 |||| |||| || | | || || ||| |||| || || || || | Sbjct 1178944 TGTACAGGTCGCGGATGTGCTGCGGAATTTCCTCGATCCGCTGTATCGAACCGTTGTGCG 1178885 Query 115796 TGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGA 115855 | || | | ||||||||| | ||| || || | | | ||||||| || | Sbjct 1178884 CAAGGATTTGGTTCTTCATATCGTCATCCCACAGGCCGAGTTCGGTCAGATCCTGCAGCA 1178825 Query 115856 GGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCG 115915 | || | ||||| || ||||| |||| || ||| | |||| ||| | | Sbjct 1178824 GATGGTGGTTGACCACCTGGAACTCGCCCGACAGCACGCGCCGATTGTAGACGTTCGAAG 1178765 Query 115916 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGG 115975 |||| ||||| || |||| ||||| |||| |||||||| |||||||| || ||||| | Sbjct 1178764 TGTACGGCTCGAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGCATCG 1178705 Query 115976 GTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCC 116035 |||||| || || || |||| ||| | ||| |||||| || || ||| Sbjct 1178704 GTGCCAGCAGGAGCGAATTCCGGATACCATGCTTGGCAATCTTTTCCTTCAGCTCGGCCC 1178645 Query 116036 AGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACG 116095 ||| | | | ||| | ||||||||| || |||| ||||| || | | | Sbjct 1178644 AGTTCCACAGGTCCGTTGGGGTCTTCTCCCACATGTCGTACTGCAGGATTCCCTTGCTCA 1178585 Query 116096 CTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCT 116155 | || | ||||| | || || || || || || | ||||| || |||| |||| Sbjct 1178584 CCGGACAGCCCTCGTACGTTTCGTACGGACCGTCGCGGGCGGCCAACTCACAGCTAGCCT 1178525 Query 116156 CGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGG--CCTCGTC 116213 | || || | | || || |||||||| || | |||| || || | | || || Sbjct 1178524 CCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCA--GCTTTTGTGCTTCCTC 1178467 Query 116214 GGAATCAAACGCGAGACGGCACAA---AATAAATACATCCGCGAGACCTTGGACACCGAG 116270 || ||| || ||| || ||| || |||| || | || || || |||| Sbjct 1178466 ACTTTCGTACG---GATGGCGCATGAGAATGAACGCATCGGCCATTCCCTGCACGCCGAT 1178410 Query 116271 GCCAATTGGGCGATGTCTCATATTAGACT--TTCGAGCGGTCTCCACGGGATAAAAATTC 116328 || || || || || | ||| || || |||| | | ||| || || | || Sbjct 1178409 ACCGATAGGTCGGTGGCGCATGTTGGAACGCTTCG--CCTCCGGCACCGGGTAGTAGTTG 1178352 Query 116329 CTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCG 116388 | ||||| | | || || || ||||| | ||| | || || | ||||| || Sbjct 1178351 ATGTCGATGATTTTGTTCAGGTTGCGCGTGACGATCTTGGCGACCTCCTTCAGCTTCACG 1178292 Query 116389 TAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTA 116448 | || | ||||| || | ||| || | || || || ||||||||||| Sbjct 1178291 AAGTCGTACGTGCGA---TCCGGCCTCACAAACATGTTCAGCGCAATCGACGCCAGATTG 1178235 Query 116449 CACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTC 116508 ||||| | | || ||||| | |||||| | || ||||| |||| || || | | Sbjct 1178234 CACACCGCAATTTCGTCCTTCGACGAGTACTCGACGATCTCCGTGCACAGGTTCGAGCAC 1178175 Query 116509 TTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATA 116568 || || ||||||| ||||| || || ||| ||| |||||||||||||||||||| Sbjct 1178174 TTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCCTTGTAGAGCATG 1178115 Query 116569 TATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACAT-CGGCGGCTGG 116627 || ||| |||||||| || |||| || || || ||| | || | ||| || Sbjct 1178114 TACGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAACCACAGATCCTGCGCCT-T 1178056 Query 116628 CACAGTGGC-GTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTT 116686 ||| || | | || || || |||| |||||| ||||| || ||||||||||| Sbjct 1178055 CAC-CTGCCGGATGAACCGACCTTCCTTCTCGTAGCCCGTGTACAGCCGCTCAAACTCTT 1177997 Query 116687 CACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCAC 116746 | ||| | ||| || ||||| || | | ||||| | || ||| | Sbjct 1177996 CGCCCCACGACTCCGACAGCCCGGGGCAGTCGTGCGGACACATAAGGCTCCACATTTCGT 1177937 Query 116747 CCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCG-A 116805 | |||| |||||||||||||| || || || | ||| ||||| |||| | || || Sbjct 1177936 TCGCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAGCGCGTAGAACATGTCACGCG 1177877 Query 116806 CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCG 116865 || || || || | | || || || || || | ||| || | | ||| | Sbjct 1177876 CACGGACCTCCTCCTTGCCAGTG-TTTTTCTTCAGATCGAGAAACTCAAACACATCGCCA 1177818 Query 116866 TGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG------ACCAGCCTGGTTT 116919 |||||||| || ||||| | |||| || | | |||| || |||||| Sbjct 1177817 TGCCACGGCTCGAGGTAGATGGCGA---ACGCACCGGGACGCTTGTTGCCGCCCTGGTCC 1177761 Query 116920 ACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCA 116979 ||||||| ||||| ||| | || || ||||| |||| | || | || || Sbjct 1177760 ACATACCGGGCCGTGTTGTTGTAGACACGCAGCATCGGAACCAACCCGTTGGAGATACCG 1177701 Query 116980 TTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATAC 117037 || || ||| || |||| || || || | || ||| | || || |||||| | Sbjct 1177700 TTCGTGCCCGCAATGTACG-TAC-CCTTCGCCCGGATGCAGTGCACGTTCAGACCAATGC 1177643 Query 117038 CCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCG 117097 | || || |||| ||||| ||||||||| | | || || |||| || || ||||| Sbjct 1177642 CTCCGGCGGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAAATTCCCTCGATAC 1177583 Query 117098 AGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCC 117142 ||| || | | | ||| |||||| ||||| ||| |||| Sbjct 1177582 TGTCGTCCGACATCGTTAGGAGAAAGCAGGACGACAGTTGGGGCC 1177538 >seq9254 Length=4138565 Score = 114 bits (126), Expect = 2e-20 Identities = 277/412 (67%), Gaps = 8/412 (2%) Strand=Plus/Minus Query 10441 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCACAAAATGAGGAG 10500 || || ||||| | |||||| | | || || || |||| | ||||| ||||| | Sbjct 2756672 TACCAGGCATCCACTTCGGAGCTTTACGGCAAGGTGGTGGAAACGCCACAGAATGAAAAA 2756613 Query 10501 ACGCCCTTCTATCCACGATCCGTCTATGGCGTCT-CAAAGGT-TGCGGCACATTGGCTCG 10558 || ||||||||||| || || || | | | | | ||| | | |||| | ||| | | Sbjct 2756612 ACACCCTTCTATCCGCGTTCGCCGTACG-CTTGTGCCAAGATGTACGGCT-ACTGGATTG 2756555 Query 10559 TGAAGAATTATCGCGAATCCTATGGTCTCTTTGTGTGCTCCGGTATTCTCTTCAACCACG 10618 ||| ||||| |||||| | || | | |||| ||| || ||||| || ||||||| Sbjct 2756554 TGATAAATTACCGCGAAGCGTACGACATGTTTGCCTGCAATGGCATTCTTTTTAACCACG 2756495 Query 10619 AGTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACC--GATGGTATCAAACA 10676 |||| || || || || | |||| || || ||||| ||| | || | || Sbjct 2756494 AGTCTCCGCGGCGGGGAGAGAATTTTGTCACCCGCAAGATAACCCGGTCAGTGGCGAA-- 2756437 Query 10677 AATCGTGGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTG 10736 |||| | || || ||||| | | || |||| || || || || || | ||||| Sbjct 2756436 AATCTCGCTTGGCCAGCAGGAGTGCTTGGAGCTGGGCAATCTTGACTCCAAGCGTGACTG 2756377 Query 10737 GGGACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTCCAACAAGAAGAGGCGGA 10796 ||| || ||||| ||||| || || ||||||||||| | | || || || | |||| Sbjct 2756376 GGGGCATGCCAAAGACTACGTGGAGGCCATGTGGCTAATGATGCAGCAGGACAAACCGGA 2756317 Query 10797 CGAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 10848 || | |||| |||| || |||||||| ||||| || ||||||| || ||| Sbjct 2756316 AGATTTTGTCATCGCCACTGGGGAGACGCACTCGGTGCGGGAGTTTGTGGAG 2756265 Score = 82.4 bits (90), Expect = 9e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| || ||| | ||||||||||| || || || || ||||||||| || || Sbjct 2197230 AGCAAAGTCACAGTGCAAGCCCTCGTCACGCGAAATCAGCTCGTTCGAGAAGGTCAAGCC 2197289 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 |||||| || || |||||||| | |||||| || || ||| ||| |||||| || Sbjct 2197290 TGGCATCAGTCCTCGCTTCTTAAGCCAGAAGATAGCGGCAAAGCTGCCGCTGAAGAAAAT 2197349 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAG 127678 ||||| || || ||||| | | ||||||| | ||| Sbjct 2197350 TCCCTCGACGGCGGCAAACGCGACAACACGCTCGCCGAAG 2197389 >seq9217 Length=1236993 Score = 95.1 bits (104), Expect = 1e-14 Identities = 287/433 (66%), Gaps = 14/433 (3%) Strand=Plus/Plus Query 175748 CCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGAAG 175807 || || || ||||| |||| |||||||| || | ||| |||| | |||| ||| || Sbjct 55686 CCGGTACCGATACCGTCGGCACCGTTCACCAGTAGCATCGGAATGATGGGCAGATACCAG 55745 Query 175808 TCTGGTTCAATCGCAC-GCCCATCATCGTCCAAATAGTTGAGCACGGGGTCATCCCTCGG 175866 ||||||| || || | | || |||| | || ||||| || || ||| ||| Sbjct 55746 ACTGGTTCGAT-GCGCTGATTGTCCTCGTACTGGTACGCGAGCAGCGGATCGTCCAGCGG 55804 Query 175867 ATCAAAGATTTTACGAGCATCCTTGGTGA--GTTTTGTGAAGATGTACCTCGTTTGAGAC 175924 || ||||| || | || | || | | ||||||||||| | || || | Sbjct 55805 ATGGAAGATGCAGCGCG--TCAGGGCCGACAGCATGGTGAAGATGTAACGCGGGCTAG-C 55861 Query 175925 GCA-TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGAT 175983 || || |||||||| | | ||||| || || ||||| | || | || |||||||| Sbjct 55862 GCTGTCCTTGCCACCGGTCAACCGCGTACCGAACTGACCGCCCGGGTACAGCAGATTGAT 55921 Query 175984 ATTGTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGTATCCGCG-AGGGAGACT- 176041 || || ||| | |||| | |||||| || || ||||| || | || | |||| Sbjct 55922 GTTATTACTGCCGACGTAGTTCTGCGCCAAGTTAACGATCGT---CGAGCAGAGCGACTG 55978 Query 176042 -TCACCGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCAT 176100 || ||||||||||| || ||| | |||||||| | | |||| ||| |||||||||| Sbjct 55979 CTCGCCGTGATGGTATGCGGACATTTCCGCCACCGAACCGGCCAGCTGGGCCACCTTCAC 56038 Query 176101 CTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAG 176160 ||| |||| ||| | |||||| | ||| ||||| | ||| ||||| || Sbjct 56039 CTCGCGCTTGTCGTTACGCTTGAAGCAGGTGAACAGCACCTTCCGCTGGCCCGGCTTCAG 56098 Query 176161 GCCGTCGGCCATG 176173 |||||| |||| Sbjct 56099 CCCGTCGAGCATG 56111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613433640486720