Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 122 1e-22
seq9254 114 2e-20
seq9217 95.1 1e-14
>seq9207
Length=1443628
Score = 122 bits (134), Expect = 1e-22
Identities = 1004/1605 (63%), Gaps = 40/1605 (2%)
Strand=Plus/Minus
Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617
|| || |||||||| |||||||| || ||| ||||||| | || | || || || | |
Sbjct 1179122 CGCAGATAGTACATGCCCGTCTTCAGGCCCATCTTCCAGCCGTAGAAGTGAATCGACGTC 1179063
Query 115618 AACTTGGAG-AGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 115676
| |||| | ||| | || ||| | | ||| | ||||| |||||||||||
Sbjct 1179062 AGCTTGCCGTAGT-TCGGTTCGGCCACGTGAATGTTGAACGACTGGGACTGATCGATGAA 1179004
Query 115677 GCGTCCCCGATCCGCCGCCATATCAAT-CACATCCTTCATCTTGATTTCCCACACAGTTC 115735
||||| ||||| ||||| | || ||| | |||| | || |||||||| ||
Sbjct 1179003 CGCACCCCGGTCCGCGGCCATTTTGATGCACGTT-TTCACCGATATCTCCCACACCGTCT 1178945
Query 115736 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCT 115795
|||| |||| || | | || || ||| |||| || || || || |
Sbjct 1178944 TGTACAGGTCGCGGATGTGCTGCGGAATTTCCTCGATCCGCTGTATCGAACCGTTGTGCG 1178885
Query 115796 TGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGA 115855
| || | | ||||||||| | ||| || || | | | ||||||| || |
Sbjct 1178884 CAAGGATTTGGTTCTTCATATCGTCATCCCACAGGCCGAGTTCGGTCAGATCCTGCAGCA 1178825
Query 115856 GGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCG 115915
| || | ||||| || ||||| |||| || ||| | |||| ||| | |
Sbjct 1178824 GATGGTGGTTGACCACCTGGAACTCGCCCGACAGCACGCGCCGATTGTAGACGTTCGAAG 1178765
Query 115916 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGG 115975
|||| ||||| || |||| ||||| |||| |||||||| |||||||| || ||||| |
Sbjct 1178764 TGTACGGCTCGAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGCATCG 1178705
Query 115976 GTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCC 116035
|||||| || || || |||| ||| | ||| |||||| || || |||
Sbjct 1178704 GTGCCAGCAGGAGCGAATTCCGGATACCATGCTTGGCAATCTTTTCCTTCAGCTCGGCCC 1178645
Query 116036 AGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACG 116095
||| | | | ||| | ||||||||| || |||| ||||| || | | |
Sbjct 1178644 AGTTCCACAGGTCCGTTGGGGTCTTCTCCCACATGTCGTACTGCAGGATTCCCTTGCTCA 1178585
Query 116096 CTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCT 116155
| || | ||||| | || || || || || || | ||||| || |||| ||||
Sbjct 1178584 CCGGACAGCCCTCGTACGTTTCGTACGGACCGTCGCGGGCGGCCAACTCACAGCTAGCCT 1178525
Query 116156 CGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGG--CCTCGTC 116213
| || || | | || || |||||||| || | |||| || || | | || ||
Sbjct 1178524 CCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCA--GCTTTTGTGCTTCCTC 1178467
Query 116214 GGAATCAAACGCGAGACGGCACAA---AATAAATACATCCGCGAGACCTTGGACACCGAG 116270
|| ||| || ||| || ||| || |||| || | || || || ||||
Sbjct 1178466 ACTTTCGTACG---GATGGCGCATGAGAATGAACGCATCGGCCATTCCCTGCACGCCGAT 1178410
Query 116271 GCCAATTGGGCGATGTCTCATATTAGACT--TTCGAGCGGTCTCCACGGGATAAAAATTC 116328
|| || || || || | ||| || || |||| | | ||| || || | ||
Sbjct 1178409 ACCGATAGGTCGGTGGCGCATGTTGGAACGCTTCG--CCTCCGGCACCGGGTAGTAGTTG 1178352
Query 116329 CTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCG 116388
| ||||| | | || || || ||||| | ||| | || || | ||||| ||
Sbjct 1178351 ATGTCGATGATTTTGTTCAGGTTGCGCGTGACGATCTTGGCGACCTCCTTCAGCTTCACG 1178292
Query 116389 TAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTA 116448
| || | ||||| || | ||| || | || || || |||||||||||
Sbjct 1178291 AAGTCGTACGTGCGA---TCCGGCCTCACAAACATGTTCAGCGCAATCGACGCCAGATTG 1178235
Query 116449 CACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTC 116508
||||| | | || ||||| | |||||| | || ||||| |||| || || | |
Sbjct 1178234 CACACCGCAATTTCGTCCTTCGACGAGTACTCGACGATCTCCGTGCACAGGTTCGAGCAC 1178175
Query 116509 TTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATA 116568
|| || ||||||| ||||| || || ||| ||| ||||||||||||||||||||
Sbjct 1178174 TTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATCCTTGTAGAGCATG 1178115
Query 116569 TATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACAT-CGGCGGCTGG 116627
|| ||| |||||||| || |||| || || || ||| | || | ||| ||
Sbjct 1178114 TACGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAACCACAGATCCTGCGCCT-T 1178056
Query 116628 CACAGTGGC-GTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTT 116686
||| || | | || || || |||| |||||| ||||| || |||||||||||
Sbjct 1178055 CAC-CTGCCGGATGAACCGACCTTCCTTCTCGTAGCCCGTGTACAGCCGCTCAAACTCTT 1177997
Query 116687 CACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCAC 116746
| ||| | ||| || ||||| || | | ||||| | || ||| |
Sbjct 1177996 CGCCCCACGACTCCGACAGCCCGGGGCAGTCGTGCGGACACATAAGGCTCCACATTTCGT 1177937
Query 116747 CCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCG-A 116805
| |||| |||||||||||||| || || || | ||| ||||| |||| | || ||
Sbjct 1177936 TCGCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAGCGCGTAGAACATGTCACGCG 1177877
Query 116806 CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCG 116865
|| || || || | | || || || || || | ||| || | | ||| |
Sbjct 1177876 CACGGACCTCCTCCTTGCCAGTG-TTTTTCTTCAGATCGAGAAACTCAAACACATCGCCA 1177818
Query 116866 TGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG------ACCAGCCTGGTTT 116919
|||||||| || ||||| | |||| || | | |||| || ||||||
Sbjct 1177817 TGCCACGGCTCGAGGTAGATGGCGA---ACGCACCGGGACGCTTGTTGCCGCCCTGGTCC 1177761
Query 116920 ACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCA 116979
||||||| ||||| ||| | || || ||||| |||| | || | || ||
Sbjct 1177760 ACATACCGGGCCGTGTTGTTGTAGACACGCAGCATCGGAACCAACCCGTTGGAGATACCG 1177701
Query 116980 TTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATAC 117037
|| || ||| || |||| || || || | || ||| | || || |||||| |
Sbjct 1177700 TTCGTGCCCGCAATGTACG-TAC-CCTTCGCCCGGATGCAGTGCACGTTCAGACCAATGC 1177643
Query 117038 CCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCG 117097
| || || |||| ||||| ||||||||| | | || || |||| || || |||||
Sbjct 1177642 CTCCGGCGGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAAATTCCCTCGATAC 1177583
Query 117098 AGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCC 117142
||| || | | | ||| |||||| ||||| ||| ||||
Sbjct 1177582 TGTCGTCCGACATCGTTAGGAGAAAGCAGGACGACAGTTGGGGCC 1177538
>seq9254
Length=4138565
Score = 114 bits (126), Expect = 2e-20
Identities = 277/412 (67%), Gaps = 8/412 (2%)
Strand=Plus/Minus
Query 10441 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCACAAAATGAGGAG 10500
|| || ||||| | |||||| | | || || || |||| | ||||| ||||| |
Sbjct 2756672 TACCAGGCATCCACTTCGGAGCTTTACGGCAAGGTGGTGGAAACGCCACAGAATGAAAAA 2756613
Query 10501 ACGCCCTTCTATCCACGATCCGTCTATGGCGTCT-CAAAGGT-TGCGGCACATTGGCTCG 10558
|| ||||||||||| || || || | | | | | ||| | | |||| | ||| | |
Sbjct 2756612 ACACCCTTCTATCCGCGTTCGCCGTACG-CTTGTGCCAAGATGTACGGCT-ACTGGATTG 2756555
Query 10559 TGAAGAATTATCGCGAATCCTATGGTCTCTTTGTGTGCTCCGGTATTCTCTTCAACCACG 10618
||| ||||| |||||| | || | | |||| ||| || ||||| || |||||||
Sbjct 2756554 TGATAAATTACCGCGAAGCGTACGACATGTTTGCCTGCAATGGCATTCTTTTTAACCACG 2756495
Query 10619 AGTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACC--GATGGTATCAAACA 10676
|||| || || || || | |||| || || ||||| ||| | || | ||
Sbjct 2756494 AGTCTCCGCGGCGGGGAGAGAATTTTGTCACCCGCAAGATAACCCGGTCAGTGGCGAA-- 2756437
Query 10677 AATCGTGGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTG 10736
|||| | || || ||||| | | || |||| || || || || || | |||||
Sbjct 2756436 AATCTCGCTTGGCCAGCAGGAGTGCTTGGAGCTGGGCAATCTTGACTCCAAGCGTGACTG 2756377
Query 10737 GGGACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTCCAACAAGAAGAGGCGGA 10796
||| || ||||| ||||| || || ||||||||||| | | || || || | ||||
Sbjct 2756376 GGGGCATGCCAAAGACTACGTGGAGGCCATGTGGCTAATGATGCAGCAGGACAAACCGGA 2756317
Query 10797 CGAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 10848
|| | |||| |||| || |||||||| ||||| || ||||||| || |||
Sbjct 2756316 AGATTTTGTCATCGCCACTGGGGAGACGCACTCGGTGCGGGAGTTTGTGGAG 2756265
Score = 82.4 bits (90), Expect = 9e-11
Identities = 114/160 (71%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578
|||||| || ||| | ||||||||||| || || || || ||||||||| || ||
Sbjct 2197230 AGCAAAGTCACAGTGCAAGCCCTCGTCACGCGAAATCAGCTCGTTCGAGAAGGTCAAGCC 2197289
Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638
|||||| || || |||||||| | |||||| || || ||| ||| |||||| ||
Sbjct 2197290 TGGCATCAGTCCTCGCTTCTTAAGCCAGAAGATAGCGGCAAAGCTGCCGCTGAAGAAAAT 2197349
Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAG 127678
||||| || || ||||| | | ||||||| | |||
Sbjct 2197350 TCCCTCGACGGCGGCAAACGCGACAACACGCTCGCCGAAG 2197389
>seq9217
Length=1236993
Score = 95.1 bits (104), Expect = 1e-14
Identities = 287/433 (66%), Gaps = 14/433 (3%)
Strand=Plus/Plus
Query 175748 CCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGAAG 175807
|| || || ||||| |||| |||||||| || | ||| |||| | |||| ||| ||
Sbjct 55686 CCGGTACCGATACCGTCGGCACCGTTCACCAGTAGCATCGGAATGATGGGCAGATACCAG 55745
Query 175808 TCTGGTTCAATCGCAC-GCCCATCATCGTCCAAATAGTTGAGCACGGGGTCATCCCTCGG 175866
||||||| || || | | || |||| | || ||||| || || ||| |||
Sbjct 55746 ACTGGTTCGAT-GCGCTGATTGTCCTCGTACTGGTACGCGAGCAGCGGATCGTCCAGCGG 55804
Query 175867 ATCAAAGATTTTACGAGCATCCTTGGTGA--GTTTTGTGAAGATGTACCTCGTTTGAGAC 175924
|| ||||| || | || | || | | ||||||||||| | || || |
Sbjct 55805 ATGGAAGATGCAGCGCG--TCAGGGCCGACAGCATGGTGAAGATGTAACGCGGGCTAG-C 55861
Query 175925 GCA-TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGAT 175983
|| || |||||||| | | ||||| || || ||||| | || | || ||||||||
Sbjct 55862 GCTGTCCTTGCCACCGGTCAACCGCGTACCGAACTGACCGCCCGGGTACAGCAGATTGAT 55921
Query 175984 ATTGTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGTATCCGCG-AGGGAGACT- 176041
|| || ||| | |||| | |||||| || || ||||| || | || | ||||
Sbjct 55922 GTTATTACTGCCGACGTAGTTCTGCGCCAAGTTAACGATCGT---CGAGCAGAGCGACTG 55978
Query 176042 -TCACCGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCAT 176100
|| ||||||||||| || ||| | |||||||| | | |||| ||| ||||||||||
Sbjct 55979 CTCGCCGTGATGGTATGCGGACATTTCCGCCACCGAACCGGCCAGCTGGGCCACCTTCAC 56038
Query 176101 CTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAG 176160
||| |||| ||| | |||||| | ||| ||||| | ||| ||||| ||
Sbjct 56039 CTCGCGCTTGTCGTTACGCTTGAAGCAGGTGAACAGCACCTTCCGCTGGCCCGGCTTCAG 56098
Query 176161 GCCGTCGGCCATG 176173
|||||| ||||
Sbjct 56099 CCCGTCGAGCATG 56111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613433640486720
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