Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 269 4e-67
seq9254 118 2e-21
>seq9207
Length=1443628
Score = 269 bits (298), Expect = 4e-67
Identities = 475/686 (69%), Gaps = 12/686 (2%)
Strand=Plus/Minus
Query 203834 TTCGTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTAC 203893
|||| ||||||||||| ||||| || ||||||||||| ||| || | | ||||||||||
Sbjct 1179170 TTCGATTTGTCCACCGTAAACTGGATCGCGTTCACGGCCGGCTTGGTGCGCAGATAGTAC 1179111
Query 203894 ATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACG 203953
||||| ||||| |||||| ||| ||| ||||| | ||| || || | ||| |||| |
Sbjct 1179110 ATGCCCGTCTTCAGGCCCATCTTCCAGCCGTAGAAGTGAATCGACGTCAGCTTGCCGTAG 1179051
Query 203954 TTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCT 204013
|| || ||||||| ||||||||| | |||||| || |||||||| | |||| ||
Sbjct 1179050 TTCGGTTCGGCCACGTGAATGTTGAACGACTGGGACTGATCGATGAACGCACCCCGGTCC 1178991
Query 204014 GCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTG 204073
|||||||| ||||| || ||| ||| |||||||||||||||||| ||| ||| | |
Sbjct 1178990 GCGGCCATTTTGATGCACGTTTTCACCGATATCTCCCACACCGTCTTGTACAGGTCGCGG 1178931
Query 204074 GTGTGTTGAGGCACATCTTCCCACG-TCC--TG-ATCGAGCCGTTGTCGGCCATCAGTCT 204129
|||| || || | || || || ||| || ||||| ||||||| || | | |
Sbjct 1178930 ATGTGCTGCGGAA----TTTCCTCGATCCGCTGTATCGAACCGTTGTGCGCAAGGATTTG 1178875
Query 204130 CATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTT 204189
|| || | || || |||||| ||| | | |||| ||| ||| ||| ||| ||||
Sbjct 1178874 GTTCTTCATATCGTCATCCCACAGGCCGAGTTCGGTCAGATCCTGCAGCAGATGGTGGTT 1178815
Query 204190 GATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTC 204249
|| | ||| || || || |||||||| | || || | | ||| ||| | || ||
Sbjct 1178814 GACCACCTGGAACTCGCCCGACAGCACGCGCCGATTGTAGACGTTCGAAGTGTACGGCTC 1178755
Query 204250 GAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAG 204309
||||| |||||||||||| | ||| || || ||| ||| || ||||| || ||||| ||
Sbjct 1178754 GAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGAGGCGGTCGGCATCGGTGCCAGCAG 1178695
Query 204310 CAGGGAGTTGCGCACACCGTATTTTTGG--ACCCTGCGCTTCAGAGAGGTCCAGTCGTGC 204367
|| || || || | ||| || |||| | | | |||||| || ||||| |
Sbjct 1178694 GAGCGAATTCCGGATACC--ATGCTTGGCAATCTTTTCCTTCAGCTCGGCCCAGTTCCAC 1178637
Query 204368 ATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTG 204427
| | | || || ||||||||||| |||| | ||| || | || || || | |
Sbjct 1178636 AGGTCCGTTGGGGTCTTCTCCCACATGTCGTACTGCAGGATTCCCTTGCTCACCGGACAG 1178577
Query 204428 CCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCG 204487
|||| |||||| || || || | |||| || || || ||| |||
Sbjct 1178576 CCCTCGTACGTTTCGTACGGACCGTCGCGGGCGGCCAACTCACAGCTAGCCTCCAGAGCG 1178517
Query 204488 TGATAGTACATGGTCTCAAAGATCTG 204513
|||||| |||||||||||||||||
Sbjct 1178516 CCATAGTAGATGGTCTCAAAGATCTG 1178491
Score = 138 bits (152), Expect = 2e-27
Identities = 437/668 (65%), Gaps = 7/668 (1%)
Strand=Plus/Minus
Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942
||| |||||||| ||||||| ||| |||||| | | ||||| | |||||||||
Sbjct 1178205 CTCGACGATCTCCGTGCACAGGTTCGAGCACTTGATCGTGCCCACGTTCTGCTGGTTGCT 1178146
Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA-TC 205001
||| ||||| || | |||||||| | |||| |||||| || |||| | ||| || ||
Sbjct 1178145 CTTCCGGTTGCACGCATCCTTGTAGAGCATGTACGGCACGCCCGTCTCGACCTGCGACTC 1178086
Query 205002 GCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGTACATCCCTTGAGACT 205061
| || | | ||||| || | |||| ||| ||| | | || |||| ||
Sbjct 1178085 GATGATCGCGAA-CCACAGATCCTGCGCCTTCACCTGCCGGATGAACCGACCTTCCTTCT 1178027
Query 205062 CGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACATT 205121
|||| ||||||||| | |||| || || || ||| |||||| || || |
Sbjct 1178026 CGTAGCCCGTGTACAGCCGCTCAAACTCTTCGCCCCACGACTCCGACAGCCCGGGGCAGT 1177967
Query 205122 TTTTGGGACACATCAGAGACCACATCT-GATCGTCTTTCACCCTCTCCATAAACAGGTCG 205180
| |||||||| || |||||| | | ||| || ||||| || ||| ||||| ||
Sbjct 1177966 CGTGCGGACACATAAGGCTCCACATTTCGTTCGCCTC-CACCCGCTTCATGAACAGATCC 1177908
Query 205181 CTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTTT 205240
| |||||| |||| |||| ||||| || | | | || | ||| ||| ||
Sbjct 1177907 GGCACCCACAGCGCGTAGAACATGTCACGCGCACGGACCTCCTCCTTGCCAGTGTTTTTC 1177848
Query 205241 TTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAACCACACGGCCATTGCG 205300
|||| || || | | | ||| | ||||||||||| | | | ||| | ||
Sbjct 1177847 TTCAGATCGAGAAACTCAAACACATCGCCATGCCACGGCTCGAGGTAGATGGCGAACGCA 1177788
Query 205301 CCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGCAGC 205360
|| || | |||||| || ||||||||||| || | | | |||| | || ||||||
Sbjct 1177787 CCGGGACGCTTGTTGCCGCCCTGGTCCACATACCGGGCCGTGTTGTTGTAGACACGCAGC 1177728
Query 205361 ATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCG-AGCCTTCAGCCCT 205419
||||| |||| ||||||| | | |||||||||| ||| || | ||||| ||||
Sbjct 1177727 ATCGGAACCAACCCGTTGGAGATACCGTTCGTGCCCGCAATGTACGTACCCTTC-GCCCG 1177669
Query 205420 CACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCACTCTTG 205479
| | | | | | ||||| || || | |||||| |||| | ||||||| |
Sbjct 1177668 GATGCAGTGCACGTTCAGACCAATGCCTCCGGCGGACTTGGAGATCAGTGCGCACTGCTT 1177609
Query 205480 CAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAGCACGAAGC 205539
||| ||| ||| || || |||| ||||||| || || | ||| |||| || |
Sbjct 1177608 CAGCGTGTCGTAAATTCCCTCGATACTGTCGTCCGACATCGTTAGGAGAAAGCAGGACGA 1177549
Query 205540 CAGCTTGG 205547
||| ||||
Sbjct 1177548 CAG-TTGG 1177542
>seq9254
Length=4138565
Score = 118 bits (130), Expect = 2e-21
Identities = 264/391 (68%), Gaps = 9/391 (2%)
Strand=Plus/Plus
Query 159744 CCAGCAACCTGTCTGCCACAAATTCGATGTAGCTAC-ACATCTGCTCACAGTTGATCCCC 159802
|||||| || ||| || || || |||||||| || | ||||| | |||||||| || |||
Sbjct 2197052 CCAGCAGCCGGTCGGCAACGAACTCGATGTA-CTGCGACATCAGGTCACAGTTCATGCCC 2197110
Query 159803 AGCAGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTC 159862
|||| || || ||||| | | || ||||||| || || | ||||| |||
Sbjct 2197111 AGCATATCGACTGGCAGCGCCTTGGTAAGGAACTCCTGTTCGATTACCACCGCATCGCGA 2197170
Query 159863 ACAATCTGCGAG--ACACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGA 159920
| || || || ||||| ||| | |||||| | | ||| || |||| |
Sbjct 2197171 ATGAT--GCTAGTCACACGCTCGCGCGTCGGCTTTTGAACCA---GGTATTTGAACATAA 2197225
Query 159921 GGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGA 159980
|||| |||||||| ||||||| |||||||| || || || | |||||| || | | | |
Sbjct 2197226 GGCAAGCAAAGTCACAGTGCAAGCCCTCGTCACGCGAAATCAGCTCGTTCGAGAAGGTCA 2197285
Query 159981 GGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAA 160040
||| ||||| | || ||| || ||||| || || || ||||| ||||| || |
Sbjct 2197286 AGCCTGGCATCAGTCCTCGCTTCTTAAGCCAGAAGATAGCGGCAAAGCTGCCGCTGAAGA 2197345
Query 160041 AGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCAT 160100
| || ||||| ||||| |||||||| || | | ||| || || ||| || ||
Sbjct 2197346 AAATTCCCTCGACGGCGGCAAACGCGACAACACGCTCGCCGAAGTTGGCTTTCTTGCTCG 2197405
Query 160101 GGGTCCACCTTTTGGCCCATTCAGCCTTCTT 160131
|||| | ||||| |||||||||||
Sbjct 2197406 AAATCCAGTTCAGTGCCCAGTCAGCCTTCTT 2197436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795059860891520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |