Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq9240 138 1e-27
seq9325 123 3e-23
seq8738 114 1e-20
>seq9240
Length=943838
Score = 138 bits (152), Expect = 1e-27
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| ||||||||| | || |||||| || || ||||||||||| || ||||| |
Sbjct 630369 CGCAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGTCCA 630428
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| || ||||||||||||||||| |||| ||||||||||| | ||| | || |||||||
Sbjct 630429 TCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTG 630488
Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558
||| ||||||| ||| | || | | ||| || | || || || | || |||
Sbjct 630489 TCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATG 630548
Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
|| || ||||| || ||||| || ||||| ||||| |||
Sbjct 630549 GTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 630587
>seq9325
Length=2359367
Score = 123 bits (136), Expect = 3e-23
Identities = 145/196 (74%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| ||||||||||| ||||| || |||| || |||||||| || |||||
Sbjct 261094 TCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCCAGCTGCTTTCCAGCGAAG 261035
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
||||| |||||||| || | || | | |||||||||| |||||| ||||| ||
Sbjct 261034 ATCAAACGCTGCTGATCTGGGGGAATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTC 260975
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | ||||| | || || || | |||||||| ||||| |||||||| || ||
Sbjct 260974 TCGATGGTGTCCGAAGGCTCGACCTCGAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACG 260915
Query 46583 AAGATTTGCATTTTGC 46598
|| || |||||| |||
Sbjct 260914 AAAATCTGCATTCTGC 260899
>seq8738
Length=1280009
Score = 114 bits (126), Expect = 1e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||||||| | ||| |||||| ||||| ||||| || || ||||| || | || ||
Sbjct 1177453 ACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGAAAGAGTACGGCCATCTTCC 1177512
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||||||||| || || | |||||||| || | || | | ||||||||||
Sbjct 1177513 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGA 1177572
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
||||| ||| | || | | |||||| | ||||| |||| ||||||||| ||
Sbjct 1177573 ATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCTCCACCTCCAACGTGATGGTCTTT 1177632
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
||||| || || || || || || ||||| |||
Sbjct 1177633 CCCGTAAGGGTCTTGACGAAAATCTGCATCTTG 1177665
Score = 109 bits (120), Expect = 6e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||||||| | ||| |||||| ||||| ||||| || || || || || | || ||
Sbjct 1177225 ACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAATCCGAAAGGGTACGGCCATCTTCC 1177284
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||||||||| || || | |||||||| || | || | | ||||||||||
Sbjct 1177285 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGA 1177344
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
||||| ||| | || | | |||||| | || || |||| ||||||||| ||
Sbjct 1177345 ATCTTGGCCTTCACATTCTCAATCGTGTCCGAAGGCTCAACCTCCAACGTGATGGTCTTT 1177404
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCATT 46594
|| ||||| || || || || |||||||||
Sbjct 1177405 CCAGTCAGGGTCTTGACGAAAATTTGCATT 1177434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565170627915840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |