Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq9207 132 6e-26 >seq9207 Length=1443628 Score = 132 bits (146), Expect = 6e-26 Identities = 573/893 (64%), Gaps = 21/893 (2%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 |||| ||||| ||||| || || || | || || || |||| ||||| || |||||| Sbjct 1178777 TAGACGTTCGAAGTGTACGGCTCGAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGAG 1178718 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTG---ATGCGT 106051 || || ||||| ||||||| || || || || | ||| | |||| || | Sbjct 1178717 GCGGTCGGCATCGGTGCCAGCAGGAGCGAATTCCGGATACCATG---CTTGGCAATCTTT 1178661 Query 106052 TCCTTGAGAACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATT 106109 ||||| || | |||||| | || | | |||| || || ||||||| || | | Sbjct 1178660 TCCTTCAGCTCGGCCCAGTTCCACAGGTCCG-TTGGGGTCTTCT-CCCACATGTCGTACT 1178603 Query 106110 GAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAG 106169 | || | || | | | ||| | ||||| | || || || | ||| | | | | Sbjct 1178602 GCAGGATTCCCTTGCTCACCGGACAGCCCTCGTACGTTTCGTACGGACCGTCGCGGGCGG 1178543 Query 106170 CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 106229 |||| |||||||| |||||||| | | | || ||||| |||||||| | |||| Sbjct 1178542 CCAACTCACAGCTAGCCTCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCA 1178483 Query 106230 TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGAC 106289 || | ||||| || || | | | ||| | ||| || |||| || | | Sbjct 1178482 GCTTTTGTGCTTCCTCACTTTCGTACGGATGGCGCATGAGAATGAACGCATCGGCCATTC 1178423 Query 106290 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACT--TTCGCGCAGTCTCAAC 106347 | || || || | ||| ||||||| ||| ||||| || || ||||| | || | Sbjct 1178422 CCTGCACGCCGATACCGATAGGTCGGTGGCGCATGTTGGAACGCTTCGC-CTCCGGCACC 1178364 Query 106348 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 106407 ||| || | || |||| |||| | ||| || || || || ||||| | || || Sbjct 1178363 GGG-TAGTAGTTGATGTCGATGATTTTGTTCAGGTTGCGCGTGACGATCTTGGCGACCTC 1178305 Query 106408 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGAT 106467 | || || | | || | |||||| || | ||| || | || || || Sbjct 1178304 CTTCAGCTTCACGAAGTCGTACGTGCGA---TCCGGCCTCACAAACATGTTCAGCGCAAT 1178248 Query 106468 TGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACA 106527 || |||| |||||| || || | || ||||| | |||||| | || || || || Sbjct 1178247 CGACGCCAGATTGCACACCGCAATTTCGTCCTTCGACGAGTACTCGACGATCTCCGTGCA 1178188 Query 106528 CAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATC 106587 || ||| || | ||| ||||| |||| |||| ||||| ||||| |||||||||||| Sbjct 1178187 CAGGTTCGAGCACTTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATC 1178128 Query 106588 CTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACAC 106647 ||||||||||||||| ||| |||||||| ||| |||| || || || ||||| Sbjct 1178127 CTTGTAGAGCATGTACGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAACCACAG 1178068 Query 106648 ATCG-GCGGCTGGTACAATGGCGT-TGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGG 106705 ||| ||| || | || || || ||| || ||| |||||| ||||| || Sbjct 1178067 ATCCTGCGCCTTCACC--TGCCGGATGAACCGACCTTCCTTCTCGTAGCCCGTGTACAGC 1178010 Query 106706 GCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 106765 |||||||| || ||| || || || || || || | || ||||| | ||| Sbjct 1178009 CGCTCAAACTCTTCGCCCCACGACTCCGACAGCCCGGGGCAGTCGTGCGGACACATAAGG 1177950 Query 106766 GACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG 106818 ||| | | |||| |||||||||||||| || || || | |||||| Sbjct 1177949 CTCCACATTTCGTTCGCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAG 1177897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589910061302080