Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq9207 132 6e-26
>seq9207
Length=1443628
Score = 132 bits (146), Expect = 6e-26
Identities = 573/893 (64%), Gaps = 21/893 (2%)
Strand=Plus/Minus
Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994
|||| ||||| ||||| || || || | || || || |||| ||||| || ||||||
Sbjct 1178777 TAGACGTTCGAAGTGTACGGCTCGAACGACTCGTTGTTGCCCAGAATTTGGGCCGTGGAG 1178718
Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTG---ATGCGT 106051
|| || ||||| ||||||| || || || || | ||| | |||| || |
Sbjct 1178717 GCGGTCGGCATCGGTGCCAGCAGGAGCGAATTCCGGATACCATG---CTTGGCAATCTTT 1178661
Query 106052 TCCTTGAGAACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATT 106109
||||| || | |||||| | || | | |||| || || ||||||| || | |
Sbjct 1178660 TCCTTCAGCTCGGCCCAGTTCCACAGGTCCG-TTGGGGTCTTCT-CCCACATGTCGTACT 1178603
Query 106110 GAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAG 106169
| || | || | | | ||| | ||||| | || || || | ||| | | | |
Sbjct 1178602 GCAGGATTCCCTTGCTCACCGGACAGCCCTCGTACGTTTCGTACGGACCGTCGCGGGCGG 1178543
Query 106170 CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 106229
|||| |||||||| |||||||| | | | || ||||| |||||||| | ||||
Sbjct 1178542 CCAACTCACAGCTAGCCTCCAGAGCGCCATAGTAGATGGTCTCAAAGATCTGCTGGTTCA 1178483
Query 106230 TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGAC 106289
|| | ||||| || || | | | ||| | ||| || |||| || | |
Sbjct 1178482 GCTTTTGTGCTTCCTCACTTTCGTACGGATGGCGCATGAGAATGAACGCATCGGCCATTC 1178423
Query 106290 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACT--TTCGCGCAGTCTCAAC 106347
| || || || | ||| ||||||| ||| ||||| || || ||||| | || |
Sbjct 1178422 CCTGCACGCCGATACCGATAGGTCGGTGGCGCATGTTGGAACGCTTCGC-CTCCGGCACC 1178364
Query 106348 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 106407
||| || | || |||| |||| | ||| || || || || ||||| | || ||
Sbjct 1178363 GGG-TAGTAGTTGATGTCGATGATTTTGTTCAGGTTGCGCGTGACGATCTTGGCGACCTC 1178305
Query 106408 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGAT 106467
| || || | | || | |||||| || | ||| || | || || ||
Sbjct 1178304 CTTCAGCTTCACGAAGTCGTACGTGCGA---TCCGGCCTCACAAACATGTTCAGCGCAAT 1178248
Query 106468 TGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACA 106527
|| |||| |||||| || || | || ||||| | |||||| | || || || ||
Sbjct 1178247 CGACGCCAGATTGCACACCGCAATTTCGTCCTTCGACGAGTACTCGACGATCTCCGTGCA 1178188
Query 106528 CAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATC 106587
|| ||| || | ||| ||||| |||| |||| ||||| ||||| ||||||||||||
Sbjct 1178187 CAGGTTCGAGCACTTGATCGTGCCCACGTTCTGCTGGTTGCTCTTCCGGTTGCACGCATC 1178128
Query 106588 CTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACAC 106647
||||||||||||||| ||| |||||||| ||| |||| || || || |||||
Sbjct 1178127 CTTGTAGAGCATGTACGGCACGCCCGTCTCGACCTGCGACTCGATGATCGCGAACCACAG 1178068
Query 106648 ATCG-GCGGCTGGTACAATGGCGT-TGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGG 106705
||| ||| || | || || || ||| || ||| |||||| ||||| ||
Sbjct 1178067 ATCCTGCGCCTTCACC--TGCCGGATGAACCGACCTTCCTTCTCGTAGCCCGTGTACAGC 1178010
Query 106706 GCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 106765
|||||||| || ||| || || || || || || | || ||||| | |||
Sbjct 1178009 CGCTCAAACTCTTCGCCCCACGACTCCGACAGCCCGGGGCAGTCGTGCGGACACATAAGG 1177950
Query 106766 GACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG 106818
||| | | |||| |||||||||||||| || || || | ||||||
Sbjct 1177949 CTCCACATTTCGTTCGCCTCCACCCGCTTCATGAACAGATCCGGCACCCACAG 1177897
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589910061302080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |