Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq9240 114 8e-21 seq8899 100 2e-16 seq8738 100 2e-16 seq9325 96.9 2e-15 >seq9240 Length=943838 Score = 114 bits (126), Expect = 8e-21 Identities = 144/196 (73%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| || || | ||| |||| |||||||| || ||||| || Sbjct 630393 TCCTTCTGAATGTTGTAGTCGGACAGCGTGCGTCCATCCTCCAGCTGCTTGCCGGCGAAG 630452 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| |||||| || || || Sbjct 630453 ATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCAC--AT 630510 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || |||| || || ||| || || | ||| ||||| || |||||||| || || | Sbjct 630511 TCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGA 630570 Query 34969 CAAAGATCTGCATATT 34984 | ||||||||||| || Sbjct 630571 CGAAGATCTGCATCTT 630586 >seq8899 Length=3132144 Score = 100 bits (110), Expect = 2e-16 Identities = 154/218 (71%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 || ||||| ||||| || || ||||||||||| ||||||||||| | || |||| Sbjct 384467 CAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAAAGCGTACGGCCATC 384526 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||||||| || ||||| || || || || || || ||| |||| | || ||||| || Sbjct 384527 CTCCAGCTGCTTACCGGCGAAGATCAGACGCTGTTGATCTGGCGGAATTCCTTCCTTATC 384586 Query 34889 GCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 ||| ||| || || || || |||| || | ||| || || | ||| ||| Sbjct 384587 CTGAATTTTCGCCTTCAC--ATTCTCGATCGTGTCCGACGGCTCGACCTCAAGGGTGATG 384644 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || || || ||||| || ||||| || |||||||| || Sbjct 384645 GTCTTGCCAGTGAGGGTTTTCACGAAAATCTGCATCTT 384682 >seq8738 Length=1280009 Score = 100 bits (110), Expect = 2e-16 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || ||||||||| | || |||| |||||||| || |||||||| Sbjct 1177243 TCCTTCTGGATGTTGTAATCCGAAAGGGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAG 1177302 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| ||| | || | ||||||||||| |||||| || || || Sbjct 1177303 ATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTCAC--AT 1177360 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || |||| || | |||||| || | || ||||| ||||| || || ||||| | Sbjct 1177361 TCTCAATCGTGTCCGAAGGCTCAACCTCCAACGTGATGGTCTTTCCAGTCAGGGTCTTGA 1177420 Query 34969 CAAAGATCTGCAT 34981 | || || ||||| Sbjct 1177421 CGAAAATTTGCAT 1177433 Score = 100 bits (110), Expect = 2e-16 Identities = 141/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || |||||||| | || |||| |||||||| || |||||||| Sbjct 1177471 TCCTTCTGGATGTTGTAATCCGAAAGAGTACGGCCATCTTCCAGCTGCTTGCCGGCAAAG 1177530 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| ||| | || | ||||||||||| |||||| || || || Sbjct 1177531 ATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTCAC--AT 1177588 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || |||| || | ||| || || | || ||||| |||||||| || ||||| | Sbjct 1177589 TCTCAATCGTGTCCGAAGGCTCCACCTCCAACGTGATGGTCTTTCCCGTAAGGGTCTTGA 1177648 Query 34969 CAAAGATCTGCATATT 34984 | || |||||||| || Sbjct 1177649 CGAAAATCTGCATCTT 1177664 >seq9325 Length=2359367 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| || ||| ||||| ||||| ||||| || || | ||| | || || Sbjct 261113 AACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTC 261054 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 |||||| ||||| || || || | || ||||| ||| | || | ||||||||||| Sbjct 261053 CAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATACCCTCCTTGTCCTG 260994 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGG 34947 ||||| ||||| | | ||||| | ||| | ||| || |||| || |||| Sbjct 260993 GATCTTAGCCTTGAC----GTTCTCGATGGTGTCCGAAGGCTCGACCTCGAGAGTGATGG 260938 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || || || || |||||||| || |||||||| Sbjct 260937 TCTTGCCAGTCAGCGTCTTCACGAAAATCTGCAT 260904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324595649520576