Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14]
9,592 sequences; 220,777,669 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq9254 96.9 4e-15
>seq9254
Length=4138565
Score = 96.9 bits (106), Expect = 4e-15
Identities = 176/258 (68%), Gaps = 0/258 (0%)
Strand=Plus/Plus
Query 18948 TTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATT 19007
||| ||||| | || ||||| ||||| || | |||||||| | |||| || ||
Sbjct 2197215 TTTGAACATAAGGCAAGCAAAGTCACAGTGCAAGCCCTCGTCACGCGAAATCAGCTCGTT 2197274
Query 19008 AGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGA 19067
|| || || || || ||||||||||||| || || | |||||| |||| |||||
Sbjct 2197275 CGAGAAGGTCAAGCCTGGCATCAGTCCTCGCTTCTTAAGCCAGAAGATAGCGGCAAAGCT 2197334
Query 19068 TCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGC 19127
|| ||||| || || || || || ||||| || || | | || || | | ||
Sbjct 2197335 GCCGCTGAAGAAAATTCCCTCGACGGCGGCAAACGCGACAACACGCTCGCCGAAGTTGGC 2197394
Query 19128 ATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGT 19187
| || | |||||| ||||||||||| ||||||||||| || ||||| || | ||
Sbjct 2197395 TTTCTTGCTCGAAATCCAGTTCAGTGCCCAGTCAGCCTTCTTCTTCACACACGGTAGCGT 2197454
Query 19188 CTCTATAGAATTAAATAG 19205
|| || | ||| || ||
Sbjct 2197455 TTCGATGGCATTGAACAG 2197472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562041403154880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |