Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20sinensis_20[genbank_20GCA_5F000441895.2_202014-07-14] 9,592 sequences; 220,777,669 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq9254 96.9 4e-15 >seq9254 Length=4138565 Score = 96.9 bits (106), Expect = 4e-15 Identities = 176/258 (68%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 18948 TTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATT 19007 ||| ||||| | || ||||| ||||| || | |||||||| | |||| || || Sbjct 2197215 TTTGAACATAAGGCAAGCAAAGTCACAGTGCAAGCCCTCGTCACGCGAAATCAGCTCGTT 2197274 Query 19008 AGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGA 19067 || || || || || ||||||||||||| || || | |||||| |||| ||||| Sbjct 2197275 CGAGAAGGTCAAGCCTGGCATCAGTCCTCGCTTCTTAAGCCAGAAGATAGCGGCAAAGCT 2197334 Query 19068 TCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGC 19127 || ||||| || || || || || ||||| || || | | || || | | || Sbjct 2197335 GCCGCTGAAGAAAATTCCCTCGACGGCGGCAAACGCGACAACACGCTCGCCGAAGTTGGC 2197394 Query 19128 ATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGT 19187 | || | |||||| ||||||||||| ||||||||||| || ||||| || | || Sbjct 2197395 TTTCTTGCTCGAAATCCAGTTCAGTGCCCAGTCAGCCTTCTTCTTCACACACGGTAGCGT 2197454 Query 19188 CTCTATAGAATTAAATAG 19205 || || | ||| || || Sbjct 2197455 TTCGATGGCATTGAACAG 2197472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562041403154880